Experiment set11IT093 for Agrobacterium fabrum C58

Compare to:

LB with Phenoxyacetic acid 5 mM

200 most important genes:

  gene name fitness t score description  
Atu3469 -4.4 -4.3 phosphoglyceromutase compare
Atu0769 -2.9 -2.4 protoheme IX farnesyltransferase compare
Atu1086 -2.7 -15.5 MFS permease compare
Atu0141 -2.5 -2.6 cytochrome O ubiquinol oxidase subunit I compare
Atu0999 -2.5 -10.0 magnesium transport protein compare
Atu1087 -2.3 -10.0 secretion protein compare
Atu4217 -2.0 -3.2 TetR family transcriptional regulator compare
Atu0421 -2.0 -2.5 ABC transporter, membrane spanning protein compare
Atu3739 -1.8 -4.5 phosphoglycerate kinase compare
Atu3009 -1.6 -1.6 exopolysaccharide production protein compare
Atu2746 -1.5 -2.7 hypothetical protein compare
Atu2684 -1.5 -2.9 hypothetical protein compare
Atu0843 -1.4 -10.7 P type cation (metal) transporter, ATPase component compare
Atu1085 -1.4 -5.2 transcriptional regulator, MarR family compare
Atu3008 -1.4 -1.3 hypothetical protein compare
Atu0598 -1.3 -5.1 phosphogluconate dehydratase compare
Atu1810 -1.3 -2.1 hypothetical protein compare
Atu0331 -1.3 -3.8 sigma-54 modulation protein compare
Atu2585 -1.3 -6.2 hypothetical protein compare
Atu3730 -1.3 -2.3 hypothetical protein compare
Atu4148 -1.3 -5.3 UDP-glucuronic acid epimerase compare
Atu4882 -1.2 -3.1 hypothetical protein compare
Atu0399 -1.2 -4.3 dihydroorotase compare
Atu3468 -1.2 -1.2 hypothetical protein compare
Atu0030 -1.2 -2.3 phosphocarrier protein HPr compare
Atu0051 -1.2 -5.6 two component sensor kinase compare
Atu4890 -1.2 -2.2 IS426 transposase compare
Atu0566 -1.2 -2.9 hypothetical protein compare
Atu2207 -1.1 -2.5 two component sensor kinase compare
Atu0050 -1.1 -5.5 two component response regulator compare
Atu0184 -1.1 -2.5 glucokinase compare
Atu2590 -1.1 -7.0 hypothetical protein compare
Atu2582 -1.1 -5.6 UDP-glucose/GDP-mannose dehydrogenase compare
Atu0422 -1.1 -2.5 ABC transporter, membrane spanning protein compare
Atu0977 -1.0 -3.2 serine protease DO-like protease compare
Atu2368 -1.0 -1.3 hypothetical protein compare
Atu2084 -1.0 -1.1 hypothetical protein compare
Atu2591 -1.0 -5.2 glucosyltransferase compare
Atu2592 -1.0 -5.1 hypothetical protein compare
Atu1439 -1.0 -2.7 hypothetical protein compare
Atu2577 -0.9 -8.2 ABC transporter, nucleotide binding/ATPase protein compare
Atu4888 -0.9 -3.3 hypothetical protein compare
Atu2633 -0.9 -2.3 RhtB family transporter compare
Atu0025 -0.9 -3.2 hypothetical protein compare
Atu2583 -0.9 -6.8 glycosyltransferase compare
Atu2831 -0.9 -4.7 glucose inhibited division protein A compare
Atu1850 -0.9 -2.6 phosphoribosylformylglycinamidine synthetase II compare
Atu0601 -0.9 -5.4 oxidoreductase compare
Atu0142 -0.9 -2.6 cytochrome o ubiquinol oxidase subunit II compare
Atu2017 -0.9 -1.0 hypothetical protein compare
Atu0912 -0.8 -1.2 Na+/H+ antiporter compare
Atu1446 -0.8 -2.1 two component response regulator compare
Atu2728 -0.8 -3.7 beta (1-->2) glucan export ATP-binding protein compare
Atu0434 -0.8 -2.3 2'-deoxycytidine 5'-triphosphate deaminase compare
Atu0206 -0.8 -2.9 hypothetical protein compare
Atu3012 -0.8 -1.6 hypothetical protein compare
Atu0031 -0.8 -1.4 PTS system, IIA component compare
Atu2793 -0.8 -3.2 cobyrinic acid a,c-diamide synthase compare
Atu4149 -0.8 -5.8 UDP-glucose 6-dehydrogenase compare
Atu1359 -0.8 -1.0 dnaK deletion suppressor protein compare
Atu2640 -0.8 -2.9 hypothetical protein compare
Atu0659 -0.8 -3.8 NTP pyrophosphohydrolase, MutT family compare
Atu0298 -0.8 -4.3 orotidine 5 compare
Atu8082 -0.8 -1.9 hypothetical protein compare
Atu4884 -0.8 -1.9 hypothetical protein compare
Atu1308 -0.8 -3.3 aspartate carbamoyl transferase catalytic subunit compare
Atu0340 -0.7 -1.5 SAM dependent methyltransferase compare
Atu2634 -0.7 -1.4 hypothetical protein compare
Atu8138 -0.7 -1.6 hypothetical protein compare
Atu3010 -0.7 -4.3 hypothetical protein compare
Atu6036 -0.7 -1.6 entry-exclusion protein compare
Atu3014 -0.7 -1.7 hypothetical protein compare
Atu0658 -0.7 -5.1 phosphate permease compare
Atu4635 -0.7 -3.7 hypothetical protein compare
Atu1307 -0.7 -3.7 dihydroorotase compare
Atu1333 -0.7 -1.7 outer membrane protein compare
Atu4317 -0.7 -1.6 TetR family transcriptional regulator compare
Atu2827 -0.7 -1.8 hypothetical protein compare
Atu0361 -0.7 -2.1 transcriptional regulator compare
Atu1339 -0.7 -2.0 ribonuclease E compare
Atu1364 -0.7 -3.2 ATP-dependent Clp protease, ATP-binding subunit compare
Atu2433 -0.7 -1.1 hypothetical protein compare
Atu2057 -0.7 -1.9 DNA helicase II compare
Atu0153 -0.7 -2.7 transcriptional regulator, Fur family compare
Atu1223 -0.7 -1.3 hypothetical protein compare
Atu2125 -0.7 -1.4 ABC transporter, nucleotide binding/ATPase protein compare
Atu2824 -0.7 -2.9 hypothetical protein compare
Atu0062 -0.7 -4.0 transcriptional regulator, ROK family compare
Atu3121 -0.7 -1.1 cold shock protein compare
Atu0185 -0.7 -3.3 methylglyoxal synthase compare
Atu0419 -0.7 -1.5 two component sensor kinase compare
Atu2555 -0.7 -2.9 L-lysine 2,3-aminomutase compare
Atu2584 -0.6 -3.5 hypothetical protein compare
Atu1030 -0.6 -0.9 GTP pyrophosphohydrolase/synthetase, RelA/SpoT family compare
Atu1204 -0.6 -3.9 potassium uptake protein compare
Atu3727 -0.6 -2.1 hypothetical protein compare
Atu2692 -0.6 -2.9 intracellular septation protein compare
Atu2832 -0.6 -3.0 tRNA modification GTPase compare
Atu0486 -0.6 -3.2 dihydroorotate dehydrogenase compare
Atu0538 -0.6 -2.2 hypothetical protein compare
Atu3016 -0.6 -2.7 phosphoglyceromutase compare
Atu2184 -0.6 -3.5 transcriptional regulator, AsnC family compare
Atu1110 -0.6 -2.3 cytosol aminopeptidase compare
Atu1225 -0.6 -1.0 hypothetical protein compare
Atu0784 -0.6 -1.8 hypothetical protein compare
Atu3336 -0.6 -1.7 hypothetical protein compare
Atu0533 -0.6 -1.6 putative inhibitor of septum formation compare
Atu6114 -0.6 -2.4 hypothetical protein compare
Atu1968 -0.6 -1.4 hypothetical protein compare
Atu0400 -0.6 -2.2 orotate phosphoribosyltransferase compare
Atu1513 -0.6 -3.3 ABC excinuclease subunit A compare
Atu0723 -0.6 -1.1 FAD dependent oxidoreductase compare
Atu2317 -0.6 -1.8 hypothetical protein compare
Atu3598 -0.6 -0.9 thiol:disulfide interchange protein compare
Atu0888 -0.6 -3.7 transcriptional regulator, MerR family compare
Atu2067 -0.6 -0.7 hypothetical protein compare
Atu8012 -0.6 -1.3 hypothetical protein compare
Atu2772 -0.6 -2.8 Invasion protein A compare
Atu8117 -0.6 -1.9 hypothetical protein compare
Atu1759 -0.6 -4.0 L-serine dehydratase compare
Atu0836 -0.5 -1.7 Glutathione-S-transferase compare
Atu1679 -0.5 -1.6 peptidyl prolyl cis-trans isomerase compare
Atu3663 -0.5 -0.9 hypothetical protein compare
Atu0602 -0.5 -3.3 glutamine synthetase compare
Atu4671 -0.5 -1.4 response regulator compare
Atu0101 -0.5 -2.7 cytochrome c compare
Atu1470 -0.5 -1.0 Camphor resistance protein compare
Atu4541 -0.5 -2.8 carboxymuconolactone decarboxylase compare
Atu3712 -0.5 -0.8 hypothetical protein compare
Atu1467 -0.5 -2.8 hypothetical protein compare
Atu2795 -0.5 -3.1 cobalamin biosynthetic protein compare
Atu2442 -0.5 -1.3 hypothetical protein compare
Atu1039 -0.5 -2.0 DNA repair protein RecO compare
Atu0322 -0.5 -2.0 enoyl CoA hydratase compare
Atu2805 -0.5 -2.9 cobalamin synthesis protein compare
Atu0149 -0.5 -1.6 enoyl-(acyl-carrier-protein) reductase compare
Atu4117 -0.5 -2.9 dipeptide ABC transporter ATPase compare
Atu1678 -0.5 -2.8 S-adenosylmethionine tRNA ribosyltransferase-isomerase compare
Atu2052 -0.5 -2.8 hypothetical protein compare
Atu3755 -0.5 -2.1 phosphoribosylaminoimidazole carboxylase ATPase subunit compare
Atu2439 -0.5 -1.3 hypothetical protein compare
Atu0036 -0.5 -1.7 hypothetical protein compare
Atu0824 -0.5 -0.9 hypothetical protein compare
Atu2354 -0.5 -1.9 transcriptional regulator, MarR family compare
Atu0630 -0.5 -1.6 hypothetical protein compare
Atu2809 -0.5 -3.3 cobalamin biosynthesis protein compare
Atu4173 -0.5 -1.4 phosphoenolpyruvate-protein phosphotransferase compare
Atu0357 -0.5 -3.2 phosphate starvation inducible protein compare
Atu2041 -0.5 -1.3 acetyltransferase compare
Atu1634 -0.5 -1.3 hypothetical protein compare
Atu3963 -0.5 -2.7 GntR family transcriptional regulator compare
Atu2796 -0.5 -2.6 precorrin-4 C11-methyltransferase compare
Atu3028 -0.5 -2.7 hypothetical protein compare
Atu1026 -0.5 -1.4 hypothetical protein compare
Atu2073 -0.5 -2.3 membrane protein compare
Atu4077 -0.5 -3.1 glycogen branching protein compare
Atu1619 -0.5 -2.0 protein-export membrane protein SECG compare
Atu1468 -0.5 -2.8 hypothetical protein compare
Atu4363 -0.4 -1.6 hypothetical protein compare
Atu6045 -0.4 -1.3 replication protein C compare
Atu0189 -0.4 -1.6 ABC transporter, membrane spanning protein (peptide) compare
Atu3019 -0.4 -3.0 hypothetical protein compare
Atu1103 -0.4 -1.8 rRNA-adenine N6,N6-dimethyltransferase compare
Atu2221 -0.4 -1.2 Lipid A biosynthesis protein compare
Atu3674 -0.4 -2.3 hypothetical protein compare
Atu3021 -0.4 -2.7 sugar ABC transporter ATPase compare
Atu1163 -0.4 -1.3 exopolysaccharide II synthesis transcriptional activator ExpG compare
Atu4469 -0.4 -1.9 iron ABC transporter permease compare
Atu0689 -0.4 -3.4 ribosomal large subunit pseudouridine synthase B compare
Atu1076 -0.4 -1.7 colicin V production protein compare
Atu0780 -0.4 -2.6 hypothetical protein compare
Atu1677 -0.4 -1.8 queuine tRNA-ribosyltransferase compare
Atu6098 -0.4 -0.6 transcriptional regulator, HTH family compare
Atu4893 -0.4 -1.8 hypothetical protein compare
Atu2807 -0.4 -2.8 cob(I)alamin adenosyltransferase compare
Atu1449 -0.4 -2.2 potassium uptake protein compare
Atu2495 -0.4 -2.2 flavoprotein oxidoreductase compare
Atu4892 -0.4 -3.1 hypothetical protein compare
Atu1242 -0.4 -2.9 cytochrome oxidase assembly factor compare
Atu0319 -0.4 -0.8 ubiquinone biosynthesis protein compare
Atu8088 -0.4 -0.6 hypothetical protein compare
Atu4346 -0.4 -2.5 hypothetical protein compare
Atu2803 -0.4 -1.6 Cobalamin biosynthesis associated protein compare
Atu3608 -0.4 -1.8 hypothetical protein compare
Atu0690 -0.4 -1.2 hypothetical protein compare
Atu2124 -0.4 -1.5 transcriptional regulator, ArsR family compare
Atu2620 -0.4 -0.8 hypothetical protein compare
Atu3603 -0.4 -1.4 two component response regulator compare
Atu1891 -0.4 -1.5 cobalamin biosynthesis protein compare
Atu2238 -0.4 -2.7 ubiquinol-cytochrome c reductase cytochrome b subunit compare
Atu1804 -0.4 -2.9 hypothetical protein compare
Atu4876 -0.4 -3.2 oxidoreductase compare
Atu0925 -0.4 -0.9 hypothetical protein compare
Atu2804 -0.4 -2.7 cobaltochelatase subunit compare
Atu1874 -0.4 -1.5 RecA protein compare
Atu4527 -0.4 -1.0 hypothetical protein compare
Atu2479 -0.4 -1.3 tRNA-Gly compare
Atu2270 -0.4 -0.6 ATP-dependent Clp protease, proteolytic subunit compare
Atu3291 -0.4 -1.8 Lpr family transcriptional regulator compare
Atu2146 -0.4 -1.6 hypothetical protein compare


Specific Phenotypes

For 3 genes in this experiment

For stress Phenoxyacetic acid in Agrobacterium fabrum C58

For stress Phenoxyacetic acid across organisms