Experiment set11IT093 for Agrobacterium fabrum C58

Compare to:

LB with Phenoxyacetic acid 5 mM

200 most detrimental genes:

  gene name fitness t score description  
Atu0795 +0.9 3.0 hypothetical protein compare
Atu0026 +0.8 1.3 hypothetical protein compare
Atu0809 +0.8 1.8 hypothetical protein compare
Atu0645 +0.8 1.6 hypothetical protein compare
Atu3566 +0.7 3.1 hypothetical protein compare
Atu0551 +0.7 3.2 flagellar protein FLGA precursor compare
Atu0585 +0.6 2.1 hypothetical protein compare
Atu4514 +0.6 3.1 RpiR family transcriptional regulator compare
Atu3634 +0.6 3.5 penicillin-binding protein dacf precursor compare
Atu2657 +0.6 1.9 hypothetical protein compare
Atu2683 +0.6 1.6 hypothetical protein compare
Atu5164 +0.6 1.1 type IV secretion protein AvhB3 compare
Atu3044 +0.6 2.4 asparaginase compare
Atu1896 +0.6 2.8 hypothetical protein compare
Atu2163 +0.5 1.0 hypothetical protein compare
Atu3775 +0.5 1.7 hypothetical protein compare
Atu2432 +0.5 1.6 hypothetical protein compare
Atu0041 +0.5 1.5 glutamine amidotransferase compare
Atu3215 +0.5 2.0 oligopeptide ABC transporter ATPase compare
Atu0354 +0.5 1.5 ferric uptake regulator compare
Atu1699 +0.5 1.4 molybdopterin-guanine dinucleotide biosynthesis protein B compare
Atu8200 +0.5 2.3 hypothetical protein compare
Atu8035 +0.5 1.4 hypothetical protein compare
Atu5451 +0.5 0.7 hypothetical protein compare
Atu1149 +0.5 0.8 adenylate cyclase compare
Atu6138 +0.5 3.3 Repressor of the acc and arc operons compare
Atu5115 +0.5 1.4 hypothetical protein compare
Atu4166 +0.5 1.6 UDP-glucose 4-epimerase compare
Atu0435 +0.5 1.1 tRNA-Gly compare
Atu4200 +0.5 1.4 hypothetical protein compare
Atu1844 +0.4 1.5 Phosphoribosylformylglycinamidine synthetase compare
Atu1219 +0.4 0.8 hypothetical protein compare
Atu4677 +0.4 0.9 hypothetical protein compare
Atu1725 +0.4 2.3 hypothetical protein compare
Atu5427 +0.4 1.9 hypothetical protein compare
Atu3604 +0.4 0.7 hypoxanthine phosphoribosyltransferase compare
Atu1302 +0.4 1.9 hypothetical protein compare
Atu3067 +0.4 2.9 hypothetical protein compare
Atu4458 +0.4 2.0 hypothetical protein compare
Atu1864 +0.4 2.3 putative homoserine/homoserine lactone efflux protein compare
Atu8118 +0.4 2.2 putative universal stress protein compare
Atu0964 +0.4 2.5 hypothetical protein compare
Atu6165 +0.4 0.9 hypothetical protein compare
Atu1252 +0.4 1.9 hypothetical protein compare
Atu0540 +0.4 1.7 hypothetical protein compare
Atu1185 +0.4 1.9 hypothetical protein compare
Atu2204 +0.4 1.4 hypothetical protein compare
Atu1041 +0.4 1.4 methyltransferase compare
Atu4437 +0.4 1.7 LysR family transcriptional regulator compare
Atu5142 +0.4 1.4 hypothetical protein compare
Atu3466 +0.4 1.2 ArsR family transcriptional regulator compare
Atu0936 +0.4 1.3 methyltransferase compare
Atu1952 +0.4 0.9 hypothetical protein compare
Atu4362 +0.4 1.9 hypothetical protein compare
Atu2193 +0.4 0.6 hypothetical protein compare
Atu2671 +0.4 2.4 ABC transporter, membrane spanning protein compare
Atu0749 +0.4 1.6 biotin synthesis BioY protein compare
Atu8174 +0.4 2.1 hypothetical protein compare
Atu0636 +0.3 2.1 hypothetical protein compare
Atu4070 +0.3 1.4 sarcosine oxidase gamma subunit compare
Atu2399 +0.3 2.5 hypothetical protein compare
Atu8022 +0.3 2.0 hypothetical protein compare
Atu2236 +0.3 1.8 adenine phosphoribosyltransferase compare
Atu3177 +0.3 1.6 ribonuclease H compare
Atu1897 +0.3 1.7 short chain dehydrogenase compare
Atu8017 +0.3 1.3 hypothetical protein compare
Atu1191 +0.3 2.1 hypothetical protein compare
Atu4504 +0.3 2.5 MarR family transcriptional regulator compare
Atu2113 +0.3 1.3 N-acetylmuramoyl-L-alanine amidase compare
Atu3926 +0.3 1.7 translation initiation inhibitor compare
Atu2465 +0.3 1.3 two component sensor kinase compare
Atu1139 +0.3 1.8 hypothetical protein compare
Atu4792 +0.3 0.7 hypothetical protein compare
Atu4238 +0.3 1.7 hydrolase compare
Atu3767 +0.3 1.3 diguanylate cyclase compare
Atu5007 +0.3 2.5 santhopine-responsive transcriptional repressor compare
Atu1892 +0.3 1.1 hypothetical protein compare
Atu1203 +0.3 0.7 hypothetical protein compare
Atu0378 +0.3 2.0 hydrolase compare
Atu3392 +0.3 1.4 methyltransferase compare
Atu4083 +0.3 1.9 aldose epimerase compare
Atu4798 +0.3 1.9 hypothetical protein compare
Atu1865 +0.3 1.4 hypothetical protein compare
Atu2626 +0.3 0.7 hypothetical protein compare
Atu0948 +0.3 1.3 hypothetical protein compare
Atu4267 +0.3 1.5 hypothetical protein compare
Atu2294 +0.3 2.0 aminoglycoside N6'-acetyltransferase compare
Atu1170 +0.3 2.1 RhtB family transporter compare
Atu3545 +0.3 1.5 hypothetical protein compare
Atu1387 +0.3 1.3 transcriptional regulator, GntR family compare
Atu4328 +0.3 1.5 hypothetical protein compare
Atu3183 +0.3 0.5 hypothetical protein compare
Atu1967 +0.3 1.1 hypothetical protein compare
Atu0874 +0.3 1.4 acetyltransferase compare
Atu0662 +0.3 1.4 transcriptional regulator, GntR family compare
Atu4499 +0.3 1.3 hypothetical protein compare
Atu3577 +0.3 2.1 transcriptional regulator compare
Atu0627 +0.3 1.4 carboxymethylenebutenolidase compare
Atu3979 +0.3 1.7 dioxygenase compare
Atu3126 +0.3 1.3 hypothetical protein compare
Atu0892 +0.3 1.7 hypothetical protein compare
Atu3647 +0.3 1.1 hypothetical protein compare
Atu3732 +0.3 2.0 hemolysin compare
Atu4454 +0.3 1.2 RpiR family transcriptional regulator compare
Atu1466 +0.3 0.7 hypothetical protein compare
Atu0188 +0.3 0.7 ABC transporter, membrane spanning protein (peptide) compare
Atu4839 +0.3 1.8 C factor compare
Atu3086 +0.3 2.0 spermidine/putrescine ABC transporter permease compare
Atu3645 +0.3 1.8 hypothetical protein compare
Atu4824 +0.3 1.6 IclR family transcriptional regulator compare
Atu0893 +0.3 1.5 ABC transporter, nucleotide binding/ATPase protein compare
Atu0995 +0.3 1.9 hypothetical protein compare
Atu4819 +0.3 1.3 hypothetical protein compare
Atu3733 +0.3 1.2 hypothetical protein compare
Atu3642 +0.3 2.1 vgrG protein compare
Atu4525 +0.3 1.7 oligopeptide ABC transporter substrate-binding protein compare
Atu4028 +0.3 1.6 recombination regulator RecX compare
Atu1366 +0.3 1.6 hypothetical protein compare
Atu0640 +0.3 0.6 hypothetical protein compare
Atu3619 +0.3 0.8 hypothetical protein compare
Atu3122 +0.3 1.3 cold shock protein compare
Atu0040 +0.3 0.7 phosphoribosylformino-5-aminoimidazole carboxamide ribotide isomerase compare
Atu5155 +0.3 1.1 MarR family transcriptional regulator compare
Atu8134 +0.3 1.5 hypothetical protein compare
Atu4617 +0.3 1.9 dTDP-D-glucose-4,6-dehydratase compare
Atu8162 +0.3 0.6 hypothetical protein compare
Atu2020 +0.3 1.3 transcriptional regulator, TetR family compare
Atu2680 +0.3 1.5 ABC transporter, nucleotide binding/ATPase protein compare
Atu3563 +0.3 1.7 transcription elongation factor regulatory protein compare
Atu4466 +0.3 1.4 oxidoreductase compare
Atu1882 +0.3 0.9 usg protein compare
Atu0997 +0.3 1.5 hypothetical protein compare
Atu1818 +0.3 1.1 hypothetical protein compare
Atu0894 +0.3 0.8 ABC transporter, membrane spanning protein compare
Atu4187 +0.3 0.5 tRNA-Met compare
Atu5430 +0.3 0.6 hypothetical protein compare
Atu2526 +0.3 1.0 hypothetical protein compare
Atu2215 +0.3 1.8 hypothetical protein compare
Atu3205 +0.3 1.9 hypothetical protein compare
Atu8120 +0.3 1.3 hypothetical protein compare
Atu3324 +0.3 1.2 hypothetical protein compare
Atu4108 +0.3 1.8 ribonuclease D compare
Atu5112 +0.3 2.0 hypothetical protein compare
Atu0705 +0.3 1.6 3-oxoacyl-(acyl carrier protein) reductase compare
Atu1997 +0.3 1.8 sulfite reductase compare
Atu3109 +0.3 2.0 2-hydroxyacid dehydrogenase compare
Atu8194 +0.3 1.4 hypothetical protein compare
Atu0883 +0.3 0.9 hypothetical protein compare
Atu1754 +0.3 0.7 hypothetical protein compare
Atu3961 +0.3 1.5 GntR family transcriptional regulator compare
Atu8089 +0.3 1.3 hypothetical protein compare
Atu3654 +0.3 1.7 hypothetical protein compare
Atu0680 +0.3 1.6 hypothetical protein compare
Atu1525 +0.3 1.0 hypothetical protein compare
Atu2768 +0.3 1.3 hypothetical protein compare
Atu3523 +0.3 1.5 polysaccharide biosynthesis-like protein compare
Atu0730 +0.3 1.2 hypothetical protein compare
Atu8161 +0.3 0.6 hypothetical protein compare
Atu1856 +0.2 1.4 inositol monophosphatase family protein compare
Atu3114 +0.2 1.4 sugar ABC transporter substrate-binding protein compare
Atu4448 +0.2 1.7 sorbitol/mannitol ABC transporter permease compare
Atu1691 +0.2 1.8 GGDEF family protein compare
Atu1641 +0.2 1.3 hypothetical protein compare
Atu1031 +0.2 1.1 hypothetical protein compare
Atu0467 +0.2 1.0 hypothetical protein compare
Atu1293 +0.2 1.5 hypothetical protein compare
Atu5146 +0.2 0.8 hypothetical protein compare
Atu0876 +0.2 0.5 superoxide dismutase compare
Atu1472 +0.2 1.4 hydrolase compare
Atu4607 +0.2 1.6 sugar acetylase compare
Atu1517 +0.2 1.3 hypothetical protein compare
Atu2064 +0.2 1.8 hypothetical protein compare
Atu0856 +0.2 1.5 transcriptional regulator, LysR family compare
Atu3031 +0.2 0.5 hypothetical protein compare
Atu2472 +0.2 0.7 hypothetical protein compare
Atu4650 +0.2 1.1 sugar ABC transporter ATPase compare
Atu0303 +0.2 1.5 hypothetical protein compare
Atu1871 +0.2 1.0 glutathione S-transferase compare
Atu3759 +0.2 0.6 hypothetical protein compare
Atu0093 +0.2 1.2 Recombination protein compare
Atu3068 +0.2 1.9 ribokinase compare
Atu4290 +0.2 0.7 hypothetical protein compare
Atu3999 +0.2 0.7 dithiobiotin synthetase compare
Atu3189 +0.2 1.4 hypothetical protein compare
Atu2691 +0.2 1.4 GGDEF family protein compare
Atu4459 +0.2 1.6 6-O-methylguanine DNA methyltransferase compare
Atu3587 +0.2 1.7 transcriptional regulator compare
Atu0878 +0.2 1.2 hypothetical protein compare
Atu8176 +0.2 0.7 hypothetical protein compare
Atu1587 +0.2 1.5 hypothetical protein compare
Atu2104 +0.2 1.1 hypothetical protein compare
Atu1394 +0.2 1.7 glutathione S-transferase compare
Atu5481 +0.2 1.3 ABC transporter membrane spanning protein compare
Atu5515 +0.2 1.5 hypothetical protein compare
Atu4767 +0.2 1.1 hypothetical protein compare
Atu3656 +0.2 1.4 acetyltransferase compare
Atu2514 +0.2 1.6 ABC transporter, nucleotide binding/ATPase protein (dipeptide) compare
Atu3862 +0.2 1.3 hypothetical protein compare
Atu4032 +0.2 1.5 sugar ABC transporter ATPase compare
Atu2788 +0.2 1.3 citrate lyase, beta subunit compare


Specific Phenotypes

For 3 genes in this experiment

For stress Phenoxyacetic acid in Agrobacterium fabrum C58

For stress Phenoxyacetic acid across organisms