Experiment set11IT092 for Agrobacterium fabrum C58

Compare to:

LB with 4-Hydroxybenzoic Acid 5 mM

200 most important genes:

  gene name fitness t score description  
Atu0999 -4.7 -8.5 magnesium transport protein compare
Atu1087 -2.5 -10.3 secretion protein compare
Atu1086 -2.5 -13.1 MFS permease compare
Atu0769 -2.2 -2.6 protoheme IX farnesyltransferase compare
Atu0421 -2.1 -2.4 ABC transporter, membrane spanning protein compare
Atu0422 -2.0 -2.5 ABC transporter, membrane spanning protein compare
Atu3763 -1.8 -2.0 hypothetical protein compare
Atu0142 -1.6 -3.5 cytochrome o ubiquinol oxidase subunit II compare
Atu0434 -1.6 -2.7 2'-deoxycytidine 5'-triphosphate deaminase compare
Atu3469 -1.6 -3.7 phosphoglyceromutase compare
Atu0659 -1.5 -6.0 NTP pyrophosphohydrolase, MutT family compare
Atu1085 -1.4 -5.9 transcriptional regulator, MarR family compare
Atu1810 -1.4 -2.1 hypothetical protein compare
Atu0843 -1.4 -10.8 P type cation (metal) transporter, ATPase component compare
Atu3739 -1.4 -2.4 phosphoglycerate kinase compare
Atu0030 -1.4 -2.4 phosphocarrier protein HPr compare
Atu0141 -1.4 -1.8 cytochrome O ubiquinol oxidase subunit I compare
Atu4161 -1.3 -1.9 hypothetical protein compare
Atu1573 -1.2 -1.5 hypothetical protein compare
Atu1030 -1.2 -2.1 GTP pyrophosphohydrolase/synthetase, RelA/SpoT family compare
Atu2439 -1.1 -2.2 hypothetical protein compare
Atu3008 -1.0 -1.0 hypothetical protein compare
Atu1110 -1.0 -3.0 cytosol aminopeptidase compare
Atu4469 -1.0 -2.6 iron ABC transporter permease compare
Atu3757 -1.0 -2.4 hypothetical protein compare
Atu4887 -0.9 -4.0 hypothetical protein compare
Atu2125 -0.9 -1.5 ABC transporter, nucleotide binding/ATPase protein compare
Atu0658 -0.9 -5.6 phosphate permease compare
Atu0050 -0.9 -3.7 two component response regulator compare
Atu0888 -0.9 -5.2 transcriptional regulator, MerR family compare
Atu4888 -0.9 -3.7 hypothetical protein compare
Atu3011 -0.9 -2.3 ArsR family transcriptional regulator compare
Atu3015 -0.8 -3.8 hypothetical protein compare
Atu4879 -0.8 -4.0 hypothetical protein compare
Atu2057 -0.8 -1.9 DNA helicase II compare
Atu0051 -0.8 -4.0 two component sensor kinase compare
Atu0184 -0.8 -2.6 glucokinase compare
Atu4317 -0.8 -2.7 TetR family transcriptional regulator compare
Atu3013 -0.8 -3.1 hypothetical protein compare
Atu3019 -0.8 -3.9 hypothetical protein compare
Atu1364 -0.8 -3.4 ATP-dependent Clp protease, ATP-binding subunit compare
Atu3009 -0.8 -0.9 exopolysaccharide production protein compare
Atu3005 -0.8 -0.7 hypothetical protein compare
Atu1667 -0.8 -1.7 hypothetical protein compare
Atu4880 -0.8 -4.6 AraC family transcriptional regulator compare
Atu0912 -0.8 -1.0 Na+/H+ antiporter compare
Atu4884 -0.7 -2.5 hypothetical protein compare
Atu3727 -0.7 -1.9 hypothetical protein compare
Atu0031 -0.7 -1.3 PTS system, IIA component compare
Atu2682 -0.7 -2.8 hypothetical protein compare
Atu0602 -0.7 -4.8 glutamine synthetase compare
Atu0153 -0.7 -2.4 transcriptional regulator, Fur family compare
Atu0920 -0.7 -3.2 hypothetical protein compare
Atu3010 -0.7 -4.1 hypothetical protein compare
Atu0040 -0.7 -0.7 phosphoribosylformino-5-aminoimidazole carboxamide ribotide isomerase compare
Atu1344 -0.7 -1.8 hypothetical protein compare
Atu3020 -0.7 -4.4 GntR family transcriptional regulator compare
Atu2620 -0.7 -1.2 hypothetical protein compare
Atu0977 -0.7 -2.5 serine protease DO-like protease compare
Atu1103 -0.7 -2.1 rRNA-adenine N6,N6-dimethyltransferase compare
Atu0206 -0.7 -1.8 hypothetical protein compare
Atu4881 -0.7 -3.8 hypothetical protein compare
Atu1241 -0.7 -1.8 hypothetical protein compare
Atu0566 -0.7 -1.7 hypothetical protein compare
Atu0784 -0.7 -2.4 hypothetical protein compare
Atu2245 -0.7 -5.0 Na+/Pi-cotransporter compare
Atu1163 -0.7 -1.5 exopolysaccharide II synthesis transcriptional activator ExpG compare
Atu3016 -0.7 -3.0 phosphoglyceromutase compare
Atu2073 -0.7 -2.7 membrane protein compare
Atu0886 -0.7 -1.4 hypothetical protein compare
Atu3023 -0.6 -4.7 sugar ABC transporter permease compare
Atu2270 -0.6 -1.6 ATP-dependent Clp protease, proteolytic subunit compare
Atu4889 -0.6 -2.4 hypothetical protein compare
Atu0357 -0.6 -4.0 phosphate starvation inducible protein compare
Atu8093 -0.6 -3.0 hypothetical protein compare
Atu3017 -0.6 -0.9 phosphoglyceromutase compare
Atu3121 -0.6 -0.9 cold shock protein compare
Atu0331 -0.6 -1.6 sigma-54 modulation protein compare
Atu6114 -0.6 -2.6 hypothetical protein compare
Atu4876 -0.6 -4.2 oxidoreductase compare
Atu4773 -0.6 -1.4 two component response regulator compare
Atu3468 -0.6 -0.6 hypothetical protein compare
Atu8088 -0.6 -1.5 hypothetical protein compare
Atu3910 -0.6 -3.1 LamB/YcsF family protein compare
Atu1177 -0.6 -2.7 hypothetical protein compare
Atu0533 -0.6 -1.2 putative inhibitor of septum formation compare
Atu0501 -0.6 -4.4 acyl-CoA dehydrogenase compare
Atu3014 -0.6 -1.5 hypothetical protein compare
Atu3668 -0.6 -1.5 siderophore biosynthesis protein compare
Atu8099 -0.6 -2.5 hypothetical protein compare
Atu8202 -0.6 -2.5 hypothetical protein compare
Atu4875 -0.6 -3.0 hypothetical protein compare
Atu1327 -0.6 -1.2 NADH-ubiquinone oxidoreductase compare
Atu3018 -0.6 -2.4 hypothetical protein compare
Atu4892 -0.6 -4.3 hypothetical protein compare
Atu4099 -0.6 -3.2 hypothetical protein compare
Atu2207 -0.6 -2.4 two component sensor kinase compare
Atu1759 -0.6 -3.5 L-serine dehydratase compare
Atu0503 -0.6 -4.6 enoyl-CoA hydratase compare
Atu1446 -0.6 -1.3 two component response regulator compare
Atu4873 -0.6 -3.2 TetR family transcriptional regulator compare
Atu0939 -0.6 -1.4 PemI protein compare
Atu2772 -0.6 -2.8 Invasion protein A compare
Atu4115 -0.6 -3.5 dipeptide ABC transporter permease compare
Atu2640 -0.5 -2.3 hypothetical protein compare
Atu4217 -0.5 -1.1 TetR family transcriptional regulator compare
Atu2803 -0.5 -2.3 Cobalamin biosynthesis associated protein compare
Atu0630 -0.5 -1.6 hypothetical protein compare
Atu4877 -0.5 -3.4 short-chain dehydrogenase compare
Atu3024 -0.5 -4.1 sugar ABC transporter permease compare
Atu4139 -0.5 -1.6 hypothetical protein compare
Atu1339 -0.5 -2.4 ribonuclease E compare
Atu0751 -0.5 -2.3 ABC transporter, nucleotide binding/ATPase protein (cobalt) compare
Atu3485 -0.5 -3.5 short chain dehydrogenase compare
Atu1904 -0.5 -1.6 transcriptional regulator compare
Atu3730 -0.5 -0.8 hypothetical protein compare
Atu3467 -0.5 -1.6 hypothetical protein compare
Atu1513 -0.5 -2.7 ABC excinuclease subunit A compare
Atu3022 -0.5 -3.2 sugar ABC transporter permease compare
Atu1592 -0.5 -3.1 hypothetical protein compare
Atu3911 -0.5 -2.4 hypothetical protein compare
Atu2746 -0.5 -2.1 hypothetical protein compare
Atu4538 -0.5 -3.8 3-carboxy-cis,cis-muconate cycloisomerase compare
Atu5057 -0.5 -1.4 hypothetical protein compare
Atu3028 -0.5 -2.8 hypothetical protein compare
Atu3663 -0.5 -0.6 hypothetical protein compare
Atu0062 -0.5 -2.7 transcriptional regulator, ROK family compare
Atu2633 -0.5 -1.4 RhtB family transporter compare
Atu2692 -0.5 -2.1 intracellular septation protein compare
Atu3509 -0.5 -1.9 hypothetical protein compare
Atu1607 -0.5 -2.1 DNA repair protein compare
Atu0601 -0.5 -3.1 oxidoreductase compare
Atu1501 -0.5 -1.8 hypothetical protein compare
Atu2807 -0.5 -3.1 cob(I)alamin adenosyltransferase compare
Atu1380 -0.5 -3.1 zinc metallopeptidase compare
Atu2367 -0.5 -1.5 hypothetical protein compare
Atu4630 -0.5 -1.2 hypothetical protein compare
Atu2824 -0.5 -2.2 hypothetical protein compare
Atu0971 -0.5 -1.9 two component sensor kinase compare
Atu2832 -0.5 -2.2 tRNA modification GTPase compare
Atu1803 -0.5 -1.9 cold shock protein compare
Atu1354 -0.5 -0.8 6-hydroxymethyl-7,8-dihydropterin pyrophosphokinase compare
Atu0941 -0.5 -0.6 hypothetical protein compare
Atu4117 -0.5 -2.1 dipeptide ABC transporter ATPase compare
Atu3249 -0.5 -2.6 septum formation inhibitor compare
Atu4890 -0.5 -1.0 IS426 transposase compare
Atu2582 -0.5 -2.6 UDP-glucose/GDP-mannose dehydrogenase compare
Atu0036 -0.5 -1.4 hypothetical protein compare
Atu1874 -0.5 -1.6 RecA protein compare
Atu1850 -0.5 -2.0 phosphoribosylformylglycinamidine synthetase II compare
Atu2634 -0.5 -1.0 hypothetical protein compare
Atu2831 -0.5 -1.7 glucose inhibited division protein A compare
Atu4133 -0.5 -1.1 hypothetical protein compare
Atu0777 -0.5 -0.6 hypothetical protein compare
Atu4527 -0.5 -1.0 hypothetical protein compare
Atu1983 -0.5 -2.3 hypothetical protein compare
Atu3755 -0.5 -1.9 phosphoribosylaminoimidazole carboxylase ATPase subunit compare
Atu4449 -0.5 -2.3 sorbitol/mannitol ABC transporter permease compare
Atu3413 -0.4 -1.7 AsnC family transcriptional regulator compare
Atu3021 -0.4 -3.2 sugar ABC transporter ATPase compare
Atu8117 -0.4 -1.2 hypothetical protein compare
Atu1021 -0.4 -1.3 outer membrane protein compare
Atu3898 -0.4 -3.1 DeoR family transcriptional regulator compare
Atu1782 -0.4 -1.4 hypothetical protein compare
Atu1705 -0.4 -2.6 SEC-independent protein translocase protein compare
Atu2826 -0.4 -1.9 protease heat shock protein compare
Atu1891 -0.4 -1.6 cobalamin biosynthesis protein compare
Atu1846 -0.4 -0.7 hypothetical protein compare
Atu4148 -0.4 -1.8 UDP-glucuronic acid epimerase compare
Atu3598 -0.4 -1.1 thiol:disulfide interchange protein compare
Atu1518 -0.4 -1.8 transcriptional regulator, Fur family compare
Atu2662 -0.4 -0.4 acetyltransferase compare
Atu3688 -0.4 -1.4 iron(III ABC transporter permease dicitrate ABC transporter permease compare
Atu1439 -0.4 -1.3 hypothetical protein compare
Atu2799 -0.4 -2.0 precorrin-6x reductase compare
Atu4749 -0.4 -1.6 fructose transport system kinase compare
Atu4113 -0.4 -3.3 dipeptide ABC transporter substrate-binding protein compare
Atu3815 -0.4 -2.3 GntR family transcriptional regulator compare
Atu0923 -0.4 -2.5 hypothetical protein compare
Atu4872 -0.4 -2.5 LysR family transcriptional regulator compare
Atu0520 -0.4 -1.6 chemotaxis receiver protein compare
Atu2796 -0.4 -2.9 precorrin-4 C11-methyltransferase compare
Atu0771 -0.4 -2.5 cytochrome c oxidase subunit III compare
Atu2585 -0.4 -2.4 hypothetical protein compare
Atu2115 -0.4 -2.5 pyrophosphate--fructose-6-phosphate 1-phosphotransferase compare
Atu0677 -0.4 -0.6 hypothetical protein compare
Atu1729 -0.4 -2.1 putative molybdenum cofactor biosynthesis protein compare
Atu2790 -0.4 -1.3 3-isopropylmalate dehydratase, small subunit compare
Atu2140 -0.4 -0.8 hypothetical protein compare
Atu0361 -0.4 -1.3 transcriptional regulator compare
Atu3025 -0.4 -3.4 oligo alginate lyase compare
Atu0768 -0.4 -2.8 cytochrome-c oxidase chain I compare
Atu2113 -0.4 -1.6 N-acetylmuramoyl-L-alanine amidase compare
Atu1140 -0.4 -2.2 phosphoribosyalaminoimidazole-succinocarboxamide synthase compare
Atu1921 -0.4 -1.7 hypothetical protein compare
Atu3697 -0.4 -1.8 ATP-dependent protease LA 2 compare
Atu2801 -0.4 -1.7 precorrin-2 C20 methyltransferase compare
Atu4893 -0.4 -1.8 hypothetical protein compare
Atu0580 -0.4 -1.1 flagellar biosynthetic protein compare
Atu0544 -0.4 -1.1 hypothetical protein compare


Specific Phenotypes

For 3 genes in this experiment

For stress 4-Hydroxybenzoic Acid in Agrobacterium fabrum C58

For stress 4-Hydroxybenzoic Acid across organisms