Experiment set11IT091 for Agrobacterium fabrum C58

Compare to:

LB with 4-Hydroxybenzoic Acid 5 mM

200 most detrimental genes:

  gene name fitness t score description  
Atu0585 +0.8 2.3 hypothetical protein compare
Atu5540 +0.8 1.5 hypothetical protein compare
Atu4677 +0.8 1.4 hypothetical protein compare
Atu1182 +0.7 1.9 hypothetical protein compare
Atu0645 +0.7 1.2 hypothetical protein compare
Atu5468 +0.7 1.5 hypothetical protein compare
Atu0931 +0.6 4.8 penicillin binding protein compare
Atu4539 +0.6 4.0 protocatechuate 3,4-dioxygenase alpha chain compare
Atu1570 +0.5 0.9 hypothetical protein compare
Atu2193 +0.5 0.9 hypothetical protein compare
Atu4543 +0.5 3.5 LysR family transcriptional regulator compare
Atu0041 +0.5 1.6 glutamine amidotransferase compare
Atu3835 +0.5 3.1 hypothetical protein compare
Atu4504 +0.5 4.4 MarR family transcriptional regulator compare
Atu0953 +0.5 1.0 hypothetical protein compare
Atu0479 +0.5 3.8 ABC transporter, substrate binding protein (amino acid) compare
Atu0895 +0.5 2.1 ABC transporter, substrate binding protein compare
Atu4544 +0.5 3.8 4-hydroxybenzoate 3-monooxygenase compare
Atu2683 +0.5 1.4 hypothetical protein compare
Atu4454 +0.5 2.0 RpiR family transcriptional regulator compare
Atu3712 +0.5 1.2 hypothetical protein compare
Atu0893 +0.5 2.2 ABC transporter, nucleotide binding/ATPase protein compare
Atu8032 +0.5 1.8 hypothetical protein compare
Atu5170 +0.5 2.4 type IV secretion protein AvhB9 compare
Atu0894 +0.5 1.5 ABC transporter, membrane spanning protein compare
Atu3834 +0.5 3.3 hypothetical protein compare
Atu4854 +0.4 3.0 hypothetical protein compare
Atu1149 +0.4 1.1 adenylate cyclase compare
Atu3627 +0.4 1.9 hypothetical protein compare
Atu0470 +0.4 1.4 hypothetical protein compare
Atu3780 +0.4 2.6 hypothetical protein compare
Atu4791 +0.4 1.6 hypothetical protein compare
Atu2441 +0.4 1.8 RNA methylase compare
Atu5173 +0.4 1.8 dehydrogenase compare
Atu2201 +0.4 1.5 hydrolase compare
Atu4106 +0.4 2.2 hypothetical protein compare
Atu4345 +0.4 1.7 hypothetical protein compare
Atu0471 +0.4 1.6 hypothetical protein compare
Atu6138 +0.4 2.5 Repressor of the acc and arc operons compare
Atu8087 +0.4 0.5 putative peptidoglycan binding protein compare
Atu2163 +0.4 0.6 hypothetical protein compare
Atu3299 +0.4 1.0 hypothetical protein compare
Atu8052 +0.4 1.3 hypothetical protein compare
Atu1056 +0.4 2.2 hypothetical protein compare
Atu5114 +0.4 1.8 hypothetical protein compare
Atu4779 +0.4 1.0 hypothetical protein compare
Atu4555 +0.4 2.3 hypothetical protein compare
Atu3619 +0.4 1.4 hypothetical protein compare
Atu0134 +0.4 2.4 hypothetical protein compare
Atu2379 +0.4 3.1 phosphomannomutase compare
Atu1647 +0.4 2.7 ABC transporter, membrane spanning protein compare
Atu1952 +0.4 0.9 hypothetical protein compare
Atu0883 +0.4 1.1 hypothetical protein compare
Atu0925 +0.4 0.8 hypothetical protein compare
Atu1566 +0.4 0.7 hypothetical protein compare
Atu1692 +0.4 1.9 hypothetical protein compare
Atu3425 +0.4 1.6 hypothetical protein compare
Atu5427 +0.4 2.0 hypothetical protein compare
Atu4151 +0.4 1.9 LysR family transcriptional regulator compare
Atu1644 +0.4 1.6 hypothetical protein compare
Atu6131 +0.4 2.1 TraR Antiactivator compare
Atu0924 +0.4 1.3 hypothetical protein compare
Atu3497 +0.4 0.7 hypothetical protein compare
Atu5430 +0.4 0.8 hypothetical protein compare
Atu4737 +0.4 1.4 hypothetical protein compare
Atu3886 +0.3 2.7 lysophospholipase compare
Atu3750 +0.3 1.1 thiamine-phosphate pyrophosphorylase compare
Atu3518 +0.3 2.8 bifunctional ornithine acetyltransferase/N-acetylglutamate synthase compare
Atu8167 +0.3 2.6 putative transmembrane protein compare
Atu5167 +0.3 1.6 type IV secretion protein AvhB6 compare
Atu4080 +0.3 2.5 glutamine amidotransferase compare
Atu0511 +0.3 2.1 pH adaption potassium efflux system protein compare
Atu2489 +0.3 2.0 hypothetical protein compare
Atu0795 +0.3 1.2 hypothetical protein compare
Atu3258 +0.3 1.3 hypothetical protein compare
Atu0182 +0.3 1.3 transcriptional regulator, GntR family compare
Atu4050 +0.3 1.7 UTP-glucose-1-phosphate uridylyltransferase compare
Atu8018 +0.3 0.5 hypothetical protein compare
Atu1445 +0.3 1.8 two component sensor kinase compare
Atu8200 +0.3 1.6 hypothetical protein compare
Atu4187 +0.3 0.7 tRNA-Met compare
Atu8131 +0.3 2.8 pH adaption potassium efflux system protein compare
Atu5513 +0.3 0.9 cold shock protein compare
Atu1889 +0.3 1.5 diacylglycerol kinase compare
Atu4575 +0.3 2.3 AraC family transcriptional regulator compare
Atu4214 +0.3 1.7 cold shock protein compare
Atu0105 +0.3 0.8 hypothetical protein compare
Atu1517 +0.3 1.3 hypothetical protein compare
Atu1366 +0.3 1.5 hypothetical protein compare
Atu8191 +0.3 0.9 hypothetical protein compare
Atu0510 +0.3 2.3 pH adaption potassium efflux system protein compare
Atu3353 +0.3 2.4 mannose-1-phosphate guanylyltransferase compare
Atu2183 +0.3 2.2 lipopolysaccharide core biosynthesis mannosyltransferase compare
Atu0536 +0.3 2.1 hypothetical protein compare
Atu0106 +0.3 1.1 cold shock protein compare
Atu1750 +0.3 1.5 phosphoribosyl c-AMP cyclohydrolase compare
Atu5028 +0.3 1.2 IS426 transposase compare
Atu1602 +0.3 2.0 transcriptional activator, Crp family compare
Atu8176 +0.3 1.0 hypothetical protein compare
Atu3073 +0.3 2.1 aspartate racemase compare
Atu4647 +0.3 2.0 hypothetical protein compare
Atu1260 +0.3 0.8 hypothetical protein compare
Atu3759 +0.3 0.7 hypothetical protein compare
Atu1264 +0.3 1.9 hypothetical protein compare
Atu3062 +0.3 2.2 LacI family transcriptional regulator compare
Atu3126 +0.3 1.9 hypothetical protein compare
Atu3519 +0.3 2.1 peptidyl-prolyl cis-trans isomerase compare
Atu4803 +0.3 1.4 two component response regulator compare
Atu0681 +0.3 1.5 hypothetical protein compare
Atu4082 +0.3 2.3 AsnC family transcriptional regulator compare
Atu2280 +0.3 2.2 ABC transporter, membrane spanning protein (proline/glycine betaine) compare
Atu4109 +0.3 2.0 hypothetical protein compare
Atu2465 +0.3 1.3 two component sensor kinase compare
Atu4840 +0.3 1.3 hypothetical protein compare
Atu6159 +0.3 1.5 hypothetical protein compare
Atu3791 +0.3 2.3 L-asparaginase compare
Atu3707 +0.3 1.0 phosphoserine aminotransferase compare
Atu0354 +0.3 0.9 ferric uptake regulator compare
Atu2204 +0.3 1.1 hypothetical protein compare
Atu3634 +0.3 1.3 penicillin-binding protein dacf precursor compare
Atu4846 +0.3 2.4 hypothetical protein compare
Atu5142 +0.3 0.8 hypothetical protein compare
Atu0938 +0.3 1.0 transcriptional regulator, MerR family compare
Atu0786 +0.3 1.4 peptidase, family M16 compare
Atu0165 +0.3 1.9 hypothetical protein compare
Atu3833 +0.3 2.2 hypothetical protein compare
Atu0595 +0.3 2.0 ABC transporter, nucleotide binding/ATPase protein compare
Atu4108 +0.3 1.9 ribonuclease D compare
Atu3215 +0.3 1.3 oligopeptide ABC transporter ATPase compare
Atu5160 +0.3 1.1 transcriptional regulator protein compare
Atu2324 +0.3 1.2 ureidoglycolate hydrolase compare
Atu4328 +0.3 1.2 hypothetical protein compare
Atu3794 +0.3 2.2 FadR family transcriptional regulator compare
Atu2294 +0.3 1.8 aminoglycoside N6'-acetyltransferase compare
Atu4839 +0.3 1.6 C factor compare
Atu0926 +0.3 1.5 hypothetical protein compare
Atu0759 +0.3 2.1 hypothetical protein compare
Atu3563 +0.3 1.5 transcription elongation factor regulatory protein compare
Atu8118 +0.3 1.5 putative universal stress protein compare
Atu8056 +0.3 0.5 hypothetical protein compare
Atu0777 +0.3 0.5 hypothetical protein compare
Atu6189 +0.3 0.7 protein secretion chaperone compare
Atu0375 +0.3 1.0 small heat shock protein compare
Atu1547 +0.3 2.3 magnesium transport protein compare
Atu0579 +0.3 1.5 hook formation protein compare
Atu6179 +0.3 1.6 virA/G regulated protein compare
Atu4542 +0.3 2.1 beta-ketoadipate enol-lactone hydrolase compare
Atu1868 +0.3 1.3 tRNA/rRNA methyltransferase compare
Atu1884 +0.3 1.6 ABC transporter, substrate binding protein (aliphatic sulfonate) compare
Atu3068 +0.3 1.8 ribokinase compare
Atu4294 +0.3 2.0 oxidoreductase compare
Atu1515 +0.3 1.1 hypothetical protein compare
Atu4620 +0.3 1.6 dipeptide ABC transporter ATPase compare
Atu3472 +0.3 1.3 2-oxoisovalerate dehydrogenase subunit beta compare
Atu1970 +0.3 0.9 hypothetical protein compare
Atu4553 +0.3 1.9 myo-inositol catabolism protein compare
Atu4141 +0.3 1.8 hypothetical protein compare
Atu2680 +0.3 1.3 ABC transporter, nucleotide binding/ATPase protein compare
Atu0736 +0.3 2.0 hemolysin compare
Atu2432 +0.3 0.9 hypothetical protein compare
Atu1835 +0.3 1.7 hypothetical protein compare
Atu2659 +0.3 2.0 MFS permease compare
Atu3775 +0.3 1.1 hypothetical protein compare
Atu3067 +0.3 1.6 hypothetical protein compare
Atu0762 +0.3 1.3 hypothetical protein compare
Atu6160 +0.3 1.6 conserved hypothetical protein compare
Atu0744 +0.3 1.0 hypothetical protein compare
Atu8198 +0.3 1.6 hypothetical protein compare
Atu0577 +0.3 1.3 FLAF protein compare
Atu0906 +0.2 1.9 Hemolysin III compare
Atu3346 +0.2 1.6 succinoglycan biosynthesis regulator compare
Atu4669 +0.2 1.9 hypothetical protein compare
Atu4798 +0.2 1.8 hypothetical protein compare
Atu0781 +0.2 1.4 hypothetical protein compare
Atu0592 +0.2 1.5 ABC transporter, membrane spanning protein compare
Atu4614 +0.2 1.4 glycosyltransferase compare
Atu4383 +0.2 1.4 hypothetical protein compare
Atu0809 +0.2 0.5 hypothetical protein compare
Atu1252 +0.2 1.0 hypothetical protein compare
Atu4608 +0.2 2.0 hypothetical protein compare
Atu2729 +0.2 1.0 hypothetical protein compare
Atu3260 +0.2 1.6 ABC transporter substrate binding protein compare
Atu1864 +0.2 1.2 putative homoserine/homoserine lactone efflux protein compare
Atu3311 +0.2 2.1 phosphomannose isomerase compare
Atu0874 +0.2 1.0 acetyltransferase compare
Atu2357 +0.2 1.2 hypothetical protein compare
Atu8203 +0.2 1.1 hypothetical protein compare
Atu4617 +0.2 1.6 dTDP-D-glucose-4,6-dehydratase compare
Atu0847 +0.2 1.6 organic hydroperoxide resistance protein compare
Atu0530 +0.2 1.6 UDP-galactose 4-epimerase compare
Atu4369 +0.2 1.5 sugar ABC transporter substrate-binding protein compare
Atu4168 +0.2 1.7 hypothetical protein compare
Atu4848 +0.2 1.5 2-deoxyribose-5-phosphate aldolase compare
Atu2504 +0.2 1.4 transcriptional regulator, GntR family compare
Atu0551 +0.2 0.7 flagellar protein FLGA precursor compare
Atu3645 +0.2 1.7 hypothetical protein compare
Atu2789 +0.2 1.3 hypothetical protein compare
Atu2402 +0.2 1.8 urease accessory protein compare
Atu4796 +0.2 1.6 hypothetical protein compare
Atu2603 +0.2 1.2 ABC transporter, membrane spanning protein (maltose) compare


Specific Phenotypes

For 2 genes in this experiment

For stress 4-Hydroxybenzoic Acid in Agrobacterium fabrum C58

For stress 4-Hydroxybenzoic Acid across organisms