Experiment set11IT087 for Agrobacterium fabrum C58

Compare to:

LB with Indole-3-pyruvic acid 5 mM

200 most detrimental genes:

  gene name fitness t score description  
Atu1182 +1.1 2.1 hypothetical protein compare
Atu0795 +0.7 2.6 hypothetical protein compare
Atu0026 +0.6 0.9 hypothetical protein compare
Atu3031 +0.6 1.3 hypothetical protein compare
Atu1190 +0.6 2.9 hypothetical protein compare
Atu2017 +0.6 1.1 hypothetical protein compare
Atu3632 +0.6 2.1 hypothetical protein compare
Atu2432 +0.6 1.7 hypothetical protein compare
Atu5468 +0.6 1.5 hypothetical protein compare
Atu3619 +0.5 2.1 hypothetical protein compare
Atu1847 +0.5 1.1 hypothetical protein compare
Atu1254 +0.5 1.4 transcriptional regulator, ArsR family compare
Atu0809 +0.5 1.5 hypothetical protein compare
Atu3465 +0.5 2.3 metallo-beta-lactamase superfamily protein compare
Atu0041 +0.5 1.3 glutamine amidotransferase compare
Atu1510 +0.5 2.4 hypothetical protein compare
Atu8144 +0.5 2.2 hypothetical protein compare
Atu5451 +0.5 0.7 hypothetical protein compare
Atu2200 +0.5 1.8 cold shock protein compare
Atu3759 +0.5 1.1 hypothetical protein compare
Atu8200 +0.5 2.2 hypothetical protein compare
Atu5115 +0.5 1.2 hypothetical protein compare
Atu1203 +0.4 1.0 hypothetical protein compare
Atu2368 +0.4 1.0 hypothetical protein compare
Atu0346 +0.4 1.7 uridylyltransferase/uridylyl-removing enzyme UTase compare
Atu5540 +0.4 0.7 hypothetical protein compare
Atu0941 +0.4 0.7 hypothetical protein compare
Atu1023 +0.4 1.4 hypothetical protein compare
Atu3569 +0.4 2.0 hypothetical protein compare
Atu1892 +0.4 2.0 hypothetical protein compare
Atu1264 +0.4 1.5 hypothetical protein compare
Atu2648 +0.4 1.2 hypothetical protein compare
Atu1260 +0.4 1.0 hypothetical protein compare
Atu2464 +0.4 1.6 formyltetrahydrofolate deformylase compare
Atu5169 +0.4 1.8 type IV secretion protein AvhB8 compare
Atu0354 +0.4 1.1 ferric uptake regulator compare
Atu4496 +0.4 2.5 acetyltransferase compare
Atu2578 +0.4 2.1 cAMP-dependent protein kinase regulatory subunit compare
Atu1889 +0.4 0.9 diacylglycerol kinase compare
Atu4349 +0.4 2.1 hypothetical protein compare
Atu8023 +0.4 1.3 hypothetical protein compare
Atu1078 +0.4 2.0 hypothetical protein compare
Atu3773 +0.4 1.5 hypothetical protein compare
Atu1835 +0.4 2.2 hypothetical protein compare
Atu4168 +0.4 2.5 hypothetical protein compare
Atu3120 +0.4 0.6 hypothetical protein compare
Atu3615 +0.4 2.1 hypothetical protein compare
Atu2201 +0.4 1.1 hydrolase compare
Atu3732 +0.4 2.5 hemolysin compare
Atu2235 +0.4 1.3 hypothetical protein compare
Atu0413 +0.4 1.2 stress induced protein compare
Atu3150 +0.4 1.5 sugar ABC transporter permease compare
Atu0681 +0.4 1.7 hypothetical protein compare
Atu1149 +0.4 0.8 adenylate cyclase compare
Atu1525 +0.4 1.5 hypothetical protein compare
Atu3491 +0.4 1.6 hypothetical protein compare
Atu3460 +0.3 1.9 RhtB family transporter compare
Atu5167 +0.3 1.7 type IV secretion protein AvhB6 compare
Atu1865 +0.3 1.4 hypothetical protein compare
Atu2236 +0.3 1.1 adenine phosphoribosyltransferase compare
Atu3510 +0.3 1.4 amidohydrolase compare
Atu1098 +0.3 1.1 hypothetical protein compare
Atu0976 +0.3 1.2 cycL protein compare
Atu0470 +0.3 1.0 hypothetical protein compare
Atu0101 +0.3 1.2 cytochrome c compare
Atu1699 +0.3 1.7 molybdopterin-guanine dinucleotide biosynthesis protein B compare
Atu3566 +0.3 1.6 hypothetical protein compare
Atu4454 +0.3 1.9 RpiR family transcriptional regulator compare
Atu2324 +0.3 1.7 ureidoglycolate hydrolase compare
Atu1689 +0.3 2.3 molybdenum cofactor biosynthesis protein C compare
Atu3067 +0.3 1.9 hypothetical protein compare
Atu3044 +0.3 1.8 asparaginase compare
Atu0739 +0.3 1.4 hypothetical protein compare
Atu0645 +0.3 0.4 hypothetical protein compare
Atu5170 +0.3 1.6 type IV secretion protein AvhB9 compare
Atu1818 +0.3 0.9 hypothetical protein compare
Atu5470 +0.3 1.1 hypothetical protein compare
Atu2187 +0.3 1.6 transcriptional regulator, ArsR family compare
Atu0671 +0.3 2.1 hypothetical protein compare
Atu2193 +0.3 0.5 hypothetical protein compare
Atu1314 +0.3 1.6 transcriptional regulator, TetR family compare
Atu1232 +0.3 0.8 hypothetical protein compare
Atu5114 +0.3 1.2 hypothetical protein compare
Atu1427 +0.3 1.9 hypothetical protein compare
Atu3511 +0.3 1.5 glutaredoxin compare
Atu2251 +0.3 2.1 NTP pyrophosphohydrolase, MutT family compare
Atu2450 +0.3 1.3 hypothetical protein compare
Atu3620 +0.3 1.8 hypothetical protein compare
Atu2787 +0.3 0.5 hypothetical protein compare
Atu3775 +0.3 1.3 hypothetical protein compare
Atu3647 +0.3 1.2 hypothetical protein compare
Atu1725 +0.3 1.6 hypothetical protein compare
Atu4854 +0.3 1.3 hypothetical protein compare
Atu0375 +0.3 1.2 small heat shock protein compare
Atu1952 +0.3 0.7 hypothetical protein compare
Atu3466 +0.3 0.8 ArsR family transcriptional regulator compare
Atu2276 +0.3 1.7 ABC transporter, substrate binding protein (branched chain amino acid) compare
Atu1737 +0.3 1.3 hypothetical protein compare
Atu2116 +0.3 1.2 hypothetical protein compare
Atu3604 +0.3 0.4 hypoxanthine phosphoribosyltransferase compare
Atu0300 +0.3 1.8 methyltransferase compare
Atu0631 +0.3 2.0 molybdenum cofactor biosynthesis protein B compare
Atu3074 +0.3 2.0 short chain dehydrogenase compare
Atu1637 +0.3 1.9 hypothetical protein compare
Atu1461 +0.3 1.7 hypothetical protein compare
Atu2232 +0.3 1.7 ATP-dependent Clp protease adaptor protein ClpS compare
Atu4452 +0.3 1.2 hypothetical protein compare
Atu4366 +0.3 1.5 short chain dehydrogenase compare
Atu8022 +0.3 1.3 hypothetical protein compare
Atu2394 +0.3 1.8 Regulator of Biofilm formation, Fnr Family compare
Atu1293 +0.3 1.2 hypothetical protein compare
Atu0924 +0.3 1.5 hypothetical protein compare
Atu5501 +0.3 1.3 hypothetical protein compare
Atu3194 +0.3 1.7 acetyltransferase compare
Atu0986 +0.3 0.6 hypothetical protein compare
Atu0458 +0.3 1.6 hypothetical protein compare
Atu8145 +0.3 1.5 hypothetical protein compare
Atu4607 +0.3 2.0 sugar acetylase compare
Atu3400 +0.3 1.4 hypothetical protein compare
Atu4441 +0.3 1.9 amidase compare
Atu1252 +0.3 1.3 hypothetical protein compare
Atu4162 +0.3 2.0 two-component response regulator compare
Atu1837 +0.3 2.0 transcriptional regulator compare
Atu6030 +0.3 1.9 ORF13 hypothetical protein compare
Atu4718 +0.3 1.5 GntR family transcriptional regulator compare
Atu0344 +0.3 1.5 hypothetical protein compare
Atu2058 +0.3 1.5 hypothetical protein compare
Atu1967 +0.3 1.3 hypothetical protein compare
Atu4542 +0.3 1.9 beta-ketoadipate enol-lactone hydrolase compare
Atu2367 +0.3 0.9 hypothetical protein compare
Atu3778 +0.3 1.7 UTP-glucose-1-phosphate uridylyltransferase compare
Atu3999 +0.3 0.9 dithiobiotin synthetase compare
Atu3468 +0.3 0.4 hypothetical protein compare
Atu0432 +0.3 1.9 O-succinylhomoserine sulfhydrylase compare
Atu2646 +0.3 1.3 hypothetical protein compare
Atu5427 +0.3 1.0 hypothetical protein compare
Atu1041 +0.3 1.3 methyltransferase compare
Atu0674 +0.3 0.7 hypothetical protein compare
Atu1435 +0.3 1.2 hypothetical protein compare
Atu0104 +0.3 1.8 hypothetical protein compare
Atu4027 +0.3 1.7 cytochrome c2 compare
Atu1801 +0.3 0.6 hypothetical protein compare
Atu1021 +0.3 0.7 outer membrane protein compare
Atu2502 +0.3 1.6 heme oxygenase compare
Atu1954 +0.3 1.6 hypothetical protein compare
Atu5535 +0.3 1.9 ABC transporter nucleotide binding/ATPase compare
Atu1160 +0.3 1.5 hypothetical protein compare
Atu1472 +0.3 1.4 hydrolase compare
Atu1343 +0.3 1.7 hypothetical protein compare
Atu3117 +0.3 1.8 hypothetical protein compare
Atu2788 +0.3 1.3 citrate lyase, beta subunit compare
Atu3699 +0.2 1.1 hypothetical protein compare
Atu0563 +0.2 1.9 flagellar motor switch protein FliG compare
Atu0948 +0.2 1.5 hypothetical protein compare
Atu0435 +0.2 0.9 tRNA-Gly compare
Atu3425 +0.2 1.0 hypothetical protein compare
Atu3529 +0.2 1.7 mannonate dehydratase compare
Atu0786 +0.2 1.5 peptidase, family M16 compare
Atu4093 +0.2 0.7 hypothetical protein compare
Atu2160 +0.2 1.8 hypothetical protein compare
Atu8186 +0.2 1.8 cellulose synthesis protein compare
Atu2472 +0.2 0.7 hypothetical protein compare
Atu1573 +0.2 0.7 hypothetical protein compare
Atu3253 +0.2 1.7 ABC transporter substrate binding protein compare
Atu5158 +0.2 1.3 hypothetical protein compare
Atu0576 +0.2 1.5 flagellar hook-associated protein compare
Atu3610 +0.2 1.0 transporter compare
Atu2033 +0.2 1.4 hypothetical protein compare
Atu8195 +0.2 0.8 hypothetical protein compare
Atu4039 +0.2 1.6 hypothetical protein compare
Atu0871 +0.2 1.4 branched-chain-amino-acid aminotransferase compare
Atu3132 +0.2 1.4 sugar ABC transporter permease compare
Atu1864 +0.2 1.4 putative homoserine/homoserine lactone efflux protein compare
Atu1466 +0.2 0.7 hypothetical protein compare
Atu4769 +0.2 1.3 hypothetical protein compare
Atu3652 +0.2 1.9 hypothetical protein compare
Atu2166 +0.2 1.2 hypothetical protein compare
Atu0531 +0.2 1.3 hypothetical protein compare
Atu2309 +0.2 1.8 xanthine dehydrogenase compare
Atu1409 +0.2 1.1 ureidoglycolate hydrolase compare
Atu0961 +0.2 1.2 hypothetical protein compare
Atu0080 +0.2 1.5 permease compare
Atu2526 +0.2 1.3 hypothetical protein compare
Atu3130 +0.2 1.1 sugar ABC transporter substrate-binding protein compare
Atu1354 +0.2 0.4 6-hydroxymethyl-7,8-dihydropterin pyrophosphokinase compare
Atu5130 +0.2 1.0 attachment protein compare
Atu3802 +0.2 1.8 proline/glycine betaine ABC transporter ATPase compare
Atu0166 +0.2 0.8 hypothetical protein compare
Atu3634 +0.2 0.9 penicillin-binding protein dacf precursor compare
Atu8188 +0.2 1.6 hypothetical protein compare
Atu3243 +0.2 1.6 hypothetical protein compare
Atu2335 +0.2 0.5 hypothetical protein compare
Atu0048 +0.2 1.8 hypothetical protein compare
Atu3071 +0.2 1.3 hypothetical protein compare
Atu3642 +0.2 1.5 vgrG protein compare
Atu4273 +0.2 1.6 acetyl-CoA carboxylase, biotin carboxylase compare
Atu6039 +0.2 1.4 conjugal transfer protein compare
Atu1544 +0.2 1.8 hypothetical protein compare
Atu3497 +0.2 0.8 hypothetical protein compare
Atu3461 +0.2 0.7 GntR family transcriptional regulator compare


Specific Phenotypes

None in this experiment

For Agrobacterium fabrum C58 in stress experiments

For stress Indole-3-pyruvic acid across organisms