Experiment set11IT085 for Agrobacterium fabrum C58

Compare to:

LB with Indole-3-butyric acid 5 mM

200 most detrimental genes:

  gene name fitness t score description  
Atu1182 +0.9 1.7 hypothetical protein compare
Atu3468 +0.9 1.4 hypothetical protein compare
Atu8087 +0.8 1.1 putative peptidoglycan binding protein compare
Atu8200 +0.8 3.5 hypothetical protein compare
Atu2193 +0.7 1.3 hypothetical protein compare
Atu2432 +0.7 1.7 hypothetical protein compare
Atu0026 +0.7 1.0 hypothetical protein compare
Atu0086 +0.7 1.4 ribosome-binding factor A compare
Atu0544 +0.6 2.2 hypothetical protein compare
Atu3423 +0.6 1.2 hypothetical protein compare
Atu1952 +0.6 1.5 hypothetical protein compare
Atu0809 +0.6 1.8 hypothetical protein compare
Atu2067 +0.6 0.9 hypothetical protein compare
Atu4166 +0.6 2.4 UDP-glucose 4-epimerase compare
Atu1007 +0.6 2.1 hypothetical protein compare
Atu8145 +0.6 2.0 hypothetical protein compare
Atu5540 +0.6 1.0 hypothetical protein compare
Atu2235 +0.6 2.0 hypothetical protein compare
Atu0762 +0.6 2.7 hypothetical protein compare
Atu0690 +0.5 1.5 hypothetical protein compare
Atu2166 +0.5 2.3 hypothetical protein compare
Atu1427 +0.5 2.9 hypothetical protein compare
Atu2324 +0.5 2.8 ureidoglycolate hydrolase compare
Atu5430 +0.5 1.2 hypothetical protein compare
Atu3120 +0.5 1.0 hypothetical protein compare
Atu2634 +0.5 1.4 hypothetical protein compare
Atu1435 +0.5 2.0 hypothetical protein compare
Atu8054 +0.5 0.9 hypothetical protein compare
Atu3299 +0.5 2.1 hypothetical protein compare
Atu0795 +0.5 1.1 hypothetical protein compare
Atu1754 +0.5 1.6 hypothetical protein compare
Atu1550 +0.5 2.0 polypeptide deformylase compare
Atu0562 +0.5 1.9 flagellar motor switch protein FliN compare
Atu0540 +0.4 1.3 hypothetical protein compare
Atu5496 +0.4 3.1 TetR family transcriptional regulator compare
Atu4362 +0.4 2.0 hypothetical protein compare
Atu0292 +0.4 2.9 iron-sulfur cluster binding protein compare
Atu0883 +0.4 1.4 hypothetical protein compare
Atu6165 +0.4 0.6 hypothetical protein compare
Atu3506 +0.4 1.8 hypothetical protein compare
Atu0920 +0.4 2.4 hypothetical protein compare
Atu3775 +0.4 1.4 hypothetical protein compare
Atu2457 +0.4 3.0 hypothetical protein compare
Atu4028 +0.4 1.8 recombination regulator RecX compare
Atu8056 +0.4 0.7 hypothetical protein compare
Atu1737 +0.4 1.7 hypothetical protein compare
Atu2677 +0.4 1.7 protein tyrosine phosphatase compare
Atu2380 +0.4 1.5 hypothetical protein compare
Atu1399 +0.4 2.7 ABC transporter, substrate binding protein (amino acid) compare
Atu3759 +0.4 1.0 hypothetical protein compare
Atu8041 +0.4 0.7 hypothetical protein compare
Atu1355 +0.4 2.0 hypothetical protein compare
Atu0206 +0.4 1.1 hypothetical protein compare
Atu3428 +0.4 2.0 hypothetical protein compare
Atu3183 +0.4 0.6 hypothetical protein compare
Atu3465 +0.4 1.6 metallo-beta-lactamase superfamily protein compare
Atu8022 +0.4 1.5 hypothetical protein compare
Atu0671 +0.4 2.2 hypothetical protein compare
Atu0212 +0.4 2.5 hypothetical protein compare
Atu4530 +0.4 2.2 TetR family transcriptional regulator compare
Atu2163 +0.4 0.3 hypothetical protein compare
Atu2183 +0.4 2.8 lipopolysaccharide core biosynthesis mannosyltransferase compare
Atu2148 +0.4 2.5 ABC transporter, membrane spanning protein compare
Atu4214 +0.4 1.0 cold shock protein compare
Atu0627 +0.4 2.3 carboxymethylenebutenolidase compare
Atu5468 +0.4 1.3 hypothetical protein compare
Atu8023 +0.4 1.2 hypothetical protein compare
Atu4608 +0.4 3.1 hypothetical protein compare
Atu2192 +0.4 0.9 hypothetical protein compare
Atu1437 +0.4 1.7 hypothetical protein compare
Atu2683 +0.3 1.0 hypothetical protein compare
Atu2788 +0.3 2.0 citrate lyase, beta subunit compare
Atu8032 +0.3 1.1 hypothetical protein compare
Atu8153 +0.3 1.5 hypothetical protein compare
Atu0874 +0.3 1.2 acetyltransferase compare
Atu1058 +0.3 2.0 hypothetical protein compare
Atu2680 +0.3 1.8 ABC transporter, nucleotide binding/ATPase protein compare
Atu5451 +0.3 0.9 hypothetical protein compare
Atu2669 +0.3 1.4 RhtB family transporter compare
Atu2232 +0.3 1.7 ATP-dependent Clp protease adaptor protein ClpS compare
Atu0467 +0.3 0.9 hypothetical protein compare
Atu5427 +0.3 1.5 hypothetical protein compare
Atu3627 +0.3 1.5 hypothetical protein compare
Atu1220 +0.3 1.8 methylated-DNA--protein-cysteine methyltransferase compare
Atu1287 +0.3 1.3 hypothetical protein compare
Atu1252 +0.3 1.5 hypothetical protein compare
Atu2657 +0.3 1.0 hypothetical protein compare
Atu0592 +0.3 2.0 ABC transporter, membrane spanning protein compare
Atu6138 +0.3 2.1 Repressor of the acc and arc operons compare
Atu8035 +0.3 0.9 hypothetical protein compare
Atu2204 +0.3 1.1 hypothetical protein compare
Atu5007 +0.3 2.0 santhopine-responsive transcriptional repressor compare
Atu5544 +0.3 2.5 hypothetical protein compare
Atu4609 +0.3 2.3 glycosyltransferase compare
Atu0470 +0.3 1.0 hypothetical protein compare
Atu0948 +0.3 1.6 hypothetical protein compare
Atu1835 +0.3 2.0 hypothetical protein compare
Atu3560 +0.3 2.1 glycosyltransferase compare
Atu0956 +0.3 1.3 phage prohead protease compare
Atu2396 +0.3 1.0 urease accessory protein compare
Atu2648 +0.3 1.6 hypothetical protein compare
Atu3892 +0.3 1.3 hypothetical protein compare
Atu2617 +0.3 1.1 chemotaxis protein compare
Atu2656 +0.3 2.1 hypothetical protein compare
Atu1967 +0.3 1.8 hypothetical protein compare
Atu2028 +0.3 1.1 transcriptional regulator, ArsR family compare
Atu3604 +0.3 0.8 hypoxanthine phosphoribosyltransferase compare
Atu5485 +0.3 1.3 hypothetical protein compare
Atu3731 +0.3 2.0 5-formyltetrahydrofolate cyclo-ligase compare
Atu0413 +0.3 0.9 stress induced protein compare
Atu2450 +0.3 1.2 hypothetical protein compare
Atu6112 +0.3 1.6 conserved hypothetical protein compare
Atu3605 +0.3 1.7 hypothetical protein compare
Atu8184 +0.3 1.2 hypothetical protein compare
Atu2262 +0.3 1.1 hypothetical protein compare
Atu2475 +0.3 1.4 ABC transporter, membrane spanning protein compare
Atu6159 +0.3 1.1 hypothetical protein compare
Atu3036 +0.3 1.3 dipeptide ABC transporter permease compare
Atu0447 +0.3 1.7 hypothetical protein compare
Atu0418 +0.3 2.0 hypothetical protein compare
Atu4543 +0.3 1.6 LysR family transcriptional regulator compare
Atu4238 +0.3 1.3 hydrolase compare
Atu3317 +0.3 1.4 hypothetical protein compare
Atu0936 +0.3 1.7 methyltransferase compare
Atu2671 +0.3 1.8 ABC transporter, membrane spanning protein compare
Atu1482 +0.3 1.2 hypothetical protein compare
Atu1883 +0.3 1.7 hypothetical protein compare
Atu2325 +0.3 1.0 hypothetical protein compare
Atu1637 +0.3 1.3 hypothetical protein compare
Atu6027 +0.3 1.7 ABC transporter, substrate binding protein (nopaline) compare
Atu4769 +0.3 1.9 hypothetical protein compare
Atu0672 +0.3 1.9 transcriptional regulator, LysR family compare
Atu8052 +0.3 0.4 hypothetical protein compare
Atu0530 +0.3 1.7 UDP-galactose 4-epimerase compare
Atu1232 +0.3 0.8 hypothetical protein compare
Atu1203 +0.3 1.0 hypothetical protein compare
Atu0109 +0.3 1.2 transcriptional regulator, MarR family compare
Atu1119 +0.3 2.2 hypothetical protein compare
Atu3730 +0.3 0.7 hypothetical protein compare
Atu2251 +0.3 1.8 NTP pyrophosphohydrolase, MutT family compare
Atu3634 +0.3 1.3 penicillin-binding protein dacf precursor compare
Atu8163 +0.3 1.7 hypothetical protein compare
Atu2531 +0.3 1.4 actinorhodin polyketide dimerase compare
Atu0393 +0.3 1.6 ABC transporter, membrane spanning protein compare
Atu4168 +0.3 1.9 hypothetical protein compare
Atu3443 +0.3 1.2 hypothetical protein compare
Atu5173 +0.3 1.0 dehydrogenase compare
Atu0237 +0.3 1.3 hypothetical protein compare
Atu1199 +0.3 1.9 ABC transporter, membrane spanning protein compare
Atu4003 +0.3 1.7 hypothetical protein compare
Atu5130 +0.3 1.4 attachment protein compare
Atu2110 +0.3 1.6 sarcosine oxidase compare
Atu4647 +0.3 1.5 hypothetical protein compare
Atu1705 +0.3 1.4 SEC-independent protein translocase protein compare
Atu2631 +0.3 1.7 hypothetical protein compare
Atu2104 +0.3 1.2 hypothetical protein compare
Atu3392 +0.3 1.0 methyltransferase compare
Atu3529 +0.3 1.3 mannonate dehydratase compare
Atu4583 +0.3 1.5 superoxide dismutase compare
Atu1483 +0.3 1.5 cytochrome b561 compare
Atu1863 +0.3 1.6 permease compare
Atu4093 +0.3 1.0 hypothetical protein compare
Atu5169 +0.3 1.1 type IV secretion protein AvhB8 compare
Atu2464 +0.3 0.9 formyltetrahydrofolate deformylase compare
Atu4151 +0.3 1.0 LysR family transcriptional regulator compare
Atu0490 +0.3 1.4 hypothetical protein compare
Atu8187 +0.2 1.3 hypothetical protein compare
Atu1249 +0.2 1.5 hypothetical protein compare
Atu0856 +0.2 1.7 transcriptional regulator, LysR family compare
Atu0374 +0.2 1.7 inosine-uridine preferring nucleoside hydrolase compare
Atu2295 +0.2 1.8 alpha-glucosidase compare
Atu4677 +0.2 0.5 hypothetical protein compare
Atu1264 +0.2 1.2 hypothetical protein compare
Atu1170 +0.2 1.5 RhtB family transporter compare
Atu0703 +0.2 1.0 keto-hydroxyglutarate-aldolase/keto-deoxy- phosphogluconate aldolase compare
Atu1226 +0.2 1.6 exoD protein compare
Atu3051 +0.2 1.7 agropine synthesis reductase compare
Atu3996 +0.2 1.4 hypothetical protein compare
Atu3324 +0.2 1.0 hypothetical protein compare
Atu1190 +0.2 1.4 hypothetical protein compare
Atu1510 +0.2 0.9 hypothetical protein compare
Atu2216 +0.2 1.6 Xaa-Pro dipeptidase compare
Atu1726 +0.2 1.5 hypothetical protein compare
Atu4607 +0.2 1.5 sugar acetylase compare
Atu4239 +0.2 1.2 flavoprotein oxidoreductase compare
Atu5034 +0.2 1.2 hypothetical protein compare
Atu5114 +0.2 1.0 hypothetical protein compare
Atu8082 +0.2 0.8 hypothetical protein compare
Atu4459 +0.2 1.5 6-O-methylguanine DNA methyltransferase compare
Atu4484 +0.2 1.2 hypothetical protein compare
Atu1397 +0.2 1.6 ABC transporter, membrane spanning protein (amino acid) compare
Atu0610 +0.2 1.5 ABC transporter, nucleotide binding/ATPase protein compare
Atu0785 +0.2 1.3 ribosomal-protein (S5)-alanine N-acetyltransferase compare
Atu4850 +0.2 1.6 hypothetical protein compare
Atu1421 +0.2 1.3 hypothetical protein compare
Atu4553 +0.2 1.9 myo-inositol catabolism protein compare
Atu3031 +0.2 0.5 hypothetical protein compare
Atu6173 +0.2 0.9 component of type IV secretion system compare
Atu0649 +0.2 1.7 cyclopropane-fatty-acyl-phospholipid synthase compare
Atu1536 +0.2 1.6 cytochrome C oxidase, FixO chain compare


Specific Phenotypes

For 4 genes in this experiment

For stress Indole-3-butyric acid in Agrobacterium fabrum C58

For stress Indole-3-butyric acid across organisms