Experiment set11IT083 for Agrobacterium fabrum C58

Compare to:

LB with Cinnamic acid 1.25 mM

200 most important genes:

  gene name fitness t score description  
Atu0141 -3.3 -3.2 cytochrome O ubiquinol oxidase subunit I compare
Atu3469 -3.2 -4.8 phosphoglyceromutase compare
Atu2582 -3.0 -9.7 UDP-glucose/GDP-mannose dehydrogenase compare
Atu2585 -2.8 -8.3 hypothetical protein compare
Atu2590 -2.7 -12.7 hypothetical protein compare
Atu2577 -2.7 -17.8 ABC transporter, nucleotide binding/ATPase protein compare
Atu4148 -2.6 -7.7 UDP-glucuronic acid epimerase compare
Atu2583 -2.6 -13.5 glycosyltransferase compare
Atu2592 -2.5 -8.5 hypothetical protein compare
Atu4149 -2.3 -12.4 UDP-glucose 6-dehydrogenase compare
Atu2591 -2.2 -8.3 glucosyltransferase compare
Atu3739 -2.0 -3.6 phosphoglycerate kinase compare
Atu2584 -2.0 -6.0 hypothetical protein compare
Atu2125 -1.9 -2.8 ABC transporter, nucleotide binding/ATPase protein compare
Atu0769 -1.7 -1.5 protoheme IX farnesyltransferase compare
Atu4317 -1.6 -2.5 TetR family transcriptional regulator compare
Atu1030 -1.5 -2.3 GTP pyrophosphohydrolase/synthetase, RelA/SpoT family compare
Atu2640 -1.4 -4.9 hypothetical protein compare
Atu1308 -1.3 -4.7 aspartate carbamoyl transferase catalytic subunit compare
Atu2207 -1.3 -4.6 two component sensor kinase compare
Atu2684 -1.3 -2.3 hypothetical protein compare
Atu1087 -1.3 -7.5 secretion protein compare
Atu4053 -1.3 -1.9 succinoglycan biosynthesis protein compare
Atu0184 -1.2 -2.7 glucokinase compare
Atu0486 -1.2 -5.3 dihydroorotate dehydrogenase compare
Atu2692 -1.2 -4.3 intracellular septation protein compare
Atu0399 -1.2 -4.7 dihydroorotase compare
Atu3008 -1.2 -1.2 hypothetical protein compare
Atu3012 -1.2 -1.8 hypothetical protein compare
Atu1086 -1.2 -8.4 MFS permease compare
Atu0025 -1.1 -1.4 hypothetical protein compare
Atu8180 -1.1 -5.2 hypothetical protein compare
Atu1542 -1.1 -4.7 Bifunctional adenosylcobalamin biosynthesis protein cobP compare
Atu1359 -1.1 -1.3 dnaK deletion suppressor protein compare
Atu5430 -1.1 -1.7 hypothetical protein compare
Atu0319 -1.1 -1.6 ubiquinone biosynthesis protein compare
Atu2554 -1.1 -2.2 lysyl-tRNA synthetase compare
Atu3730 -1.0 -1.9 hypothetical protein compare
Atu0086 -1.0 -1.3 ribosome-binding factor A compare
Atu0030 -1.0 -2.0 phosphocarrier protein HPr compare
Atu4217 -1.0 -1.9 TetR family transcriptional regulator compare
Atu2306 -1.0 -5.1 methionine aminopeptidase compare
Atu0977 -1.0 -2.5 serine protease DO-like protease compare
Atu0298 -1.0 -4.6 orotidine 5 compare
Atu6114 -1.0 -3.9 hypothetical protein compare
Atu4541 -0.9 -3.6 carboxymuconolactone decarboxylase compare
Atu0598 -0.9 -4.9 phosphogluconate dehydratase compare
Atu4792 -0.9 -2.1 hypothetical protein compare
Atu1364 -0.9 -4.2 ATP-dependent Clp protease, ATP-binding subunit compare
Atu0999 -0.9 -4.3 magnesium transport protein compare
Atu0331 -0.9 -2.7 sigma-54 modulation protein compare
Atu4072 -0.9 -1.8 nodulation protein N compare
Atu1685 -0.9 -1.2 hypothetical protein compare
Atu0400 -0.9 -3.4 orotate phosphoribosyltransferase compare
Atu0422 -0.9 -1.2 ABC transporter, membrane spanning protein compare
Atu0142 -0.8 -2.6 cytochrome o ubiquinol oxidase subunit II compare
Atu4469 -0.8 -3.0 iron ABC transporter permease compare
Atu1223 -0.8 -1.7 hypothetical protein compare
Atu3486 -0.8 -1.8 DeoR family transcriptional regulator compare
Atu2620 -0.8 -1.4 hypothetical protein compare
Atu1810 -0.8 -1.4 hypothetical protein compare
Atu4161 -0.8 -2.1 hypothetical protein compare
Atu2052 -0.8 -4.8 hypothetical protein compare
Atu0050 -0.8 -2.8 two component response regulator compare
Atu0912 -0.8 -1.5 Na+/H+ antiporter compare
Atu0040 -0.8 -0.8 phosphoribosylformino-5-aminoimidazole carboxamide ribotide isomerase compare
Atu8195 -0.8 -1.5 hypothetical protein compare
Atu1847 -0.8 -1.3 hypothetical protein compare
Atu3598 -0.8 -1.9 thiol:disulfide interchange protein compare
Atu0051 -0.7 -3.7 two component sensor kinase compare
Atu0185 -0.7 -4.3 methylglyoxal synthase compare
Atu0031 -0.7 -1.3 PTS system, IIA component compare
Atu1846 -0.7 -1.5 hypothetical protein compare
Atu3013 -0.7 -2.4 hypothetical protein compare
Atu1307 -0.7 -3.3 dihydroorotase compare
Atu0687 -0.7 -1.6 hypothetical protein compare
Atu1204 -0.7 -3.6 potassium uptake protein compare
Atu6036 -0.7 -1.2 entry-exclusion protein compare
Atu0784 -0.7 -1.5 hypothetical protein compare
Atu1241 -0.7 -2.1 hypothetical protein compare
Atu3011 -0.7 -1.7 ArsR family transcriptional regulator compare
Atu4616 -0.7 -1.2 dTDP-4-dehydrorhamnose reductase compare
Atu0434 -0.7 -1.8 2'-deoxycytidine 5'-triphosphate deaminase compare
Atu2805 -0.7 -3.7 cobalamin synthesis protein compare
Atu2439 -0.7 -1.4 hypothetical protein compare
Atu3492 -0.7 -2.7 sugar kinase compare
Atu2798 -0.6 -2.6 precorrin-6y methyltransferase compare
Atu2831 -0.6 -2.9 glucose inhibited division protein A compare
Atu1759 -0.6 -4.0 L-serine dehydratase compare
Atu3505 -0.6 -3.1 3-hydroxyisobutyryl-CoA hydrolase compare
Atu4882 -0.6 -1.7 hypothetical protein compare
Atu4050 -0.6 -1.7 UTP-glucose-1-phosphate uridylyltransferase compare
Atu2824 -0.6 -2.4 hypothetical protein compare
Atu1026 -0.6 -2.0 hypothetical protein compare
Atu1646 -0.6 -3.0 ABC transporter, nucleotide binding/ATPase protein compare
Atu2728 -0.6 -2.6 beta (1-->2) glucan export ATP-binding protein compare
Atu1891 -0.6 -2.1 cobalamin biosynthesis protein compare
Atu2746 -0.6 -2.3 hypothetical protein compare
Atu8168 -0.6 -1.9 hypothetical protein compare
Atu3910 -0.6 -2.5 LamB/YcsF family protein compare
Atu1850 -0.6 -2.2 phosphoribosylformylglycinamidine synthetase II compare
Atu1803 -0.6 -3.8 cold shock protein compare
Atu4468 -0.6 -3.5 iron transport ABC transporter permease compare
Atu4671 -0.6 -2.0 response regulator compare
Atu0971 -0.6 -2.2 two component sensor kinase compare
Atu0036 -0.5 -1.9 hypothetical protein compare
Atu0751 -0.5 -2.6 ABC transporter, nucleotide binding/ATPase protein (cobalt) compare
Atu0756 -0.5 -2.8 phosphoglycerate mutase compare
Atu3754 -0.5 -2.6 phosphoribosylaminoimidazole carboxylase catalytic subunit compare
Atu2796 -0.5 -3.2 precorrin-4 C11-methyltransferase compare
Atu2146 -0.5 -2.5 hypothetical protein compare
Atu0533 -0.5 -1.1 putative inhibitor of septum formation compare
Atu1232 -0.5 -1.4 hypothetical protein compare
Atu0647 -0.5 -2.6 phosphoribosylamine--glycine ligase compare
Atu3911 -0.5 -2.7 hypothetical protein compare
Atu8177 -0.5 -2.6 hypothetical protein compare
Atu0496 -0.5 -2.6 hypothetical protein compare
Atu6106 -0.5 -2.0 conserved hypothetical protein compare
Atu1754 -0.5 -0.9 hypothetical protein compare
Atu1076 -0.5 -2.1 colicin V production protein compare
Atu3021 -0.5 -2.9 sugar ABC transporter ATPase compare
Atu8082 -0.5 -1.1 hypothetical protein compare
Atu1513 -0.5 -2.8 ABC excinuclease subunit A compare
Atu2045 -0.5 -2.3 HFLK protein compare
Atu3593 -0.5 -3.5 hypothetical protein compare
Atu4881 -0.5 -2.3 hypothetical protein compare
Atu3023 -0.5 -3.2 sugar ABC transporter permease compare
Atu1793 -0.5 -3.4 phosphatidylcholine synthase compare
Atu3750 -0.5 -1.3 thiamine-phosphate pyrophosphorylase compare
Atu2237 -0.5 -2.5 cytochrome c1 compare
Atu4873 -0.5 -2.9 TetR family transcriptional regulator compare
Atu3019 -0.5 -2.5 hypothetical protein compare
Atu5163 -0.5 -2.1 type IV secretion protein AvhB2 compare
Atu2184 -0.5 -2.9 transcriptional regulator, AsnC family compare
Atu3727 -0.5 -1.7 hypothetical protein compare
Atu0062 -0.5 -2.9 transcriptional regulator, ROK family compare
Atu0659 -0.5 -2.2 NTP pyrophosphohydrolase, MutT family compare
Atu1110 -0.5 -1.7 cytosol aminopeptidase compare
Atu1354 -0.5 -0.8 6-hydroxymethyl-7,8-dihydropterin pyrophosphokinase compare
Atu8117 -0.5 -1.1 hypothetical protein compare
Atu0538 -0.5 -1.8 hypothetical protein compare
Atu3395 -0.5 -2.5 iron (III ABC transporter permease ABC transporter permease compare
Atu1085 -0.5 -1.9 transcriptional regulator, MarR family compare
Atu3218 -0.5 -2.0 hypothetical protein compare
Atu8202 -0.5 -1.9 hypothetical protein compare
Atu3015 -0.5 -2.4 hypothetical protein compare
Atu4773 -0.5 -1.0 two component response regulator compare
Atu0771 -0.5 -2.6 cytochrome c oxidase subunit III compare
Atu3518 -0.5 -2.8 bifunctional ornithine acetyltransferase/N-acetylglutamate synthase compare
Atu0419 -0.5 -1.2 two component sensor kinase compare
Atu4630 -0.5 -1.0 hypothetical protein compare
Atu3018 -0.5 -1.7 hypothetical protein compare
Atu4418 -0.5 -1.8 glutaryl-CoA dehydrogenase compare
Atu2790 -0.5 -1.3 3-isopropylmalate dehydratase, small subunit compare
Atu1184 -0.5 -1.3 hypothetical protein compare
Atu2633 -0.5 -1.2 RhtB family transporter compare
Atu4472 -0.5 -1.6 hypothetical protein compare
Atu2793 -0.5 -2.0 cobyrinic acid a,c-diamide synthase compare
Atu1019 -0.5 -1.6 hypothetical protein compare
Atu1449 -0.5 -3.1 potassium uptake protein compare
Atu3798 -0.5 -2.1 TetR family transcriptional regulator compare
Atu4077 -0.5 -3.1 glycogen branching protein compare
Atu2070 -0.5 -2.9 aminopeptidase P compare
Atu0126 -0.4 -2.1 membrane lipoprotein compare
Atu2367 -0.4 -2.3 hypothetical protein compare
Atu4890 -0.4 -1.0 IS426 transposase compare
Atu2799 -0.4 -1.8 precorrin-6x reductase compare
Atu4120 -0.4 -3.2 mandelate racemase compare
Atu0039 -0.4 -1.2 imidazoleglycerol-phosphate synthase cyclase compare
Atu3757 -0.4 -1.1 hypothetical protein compare
Atu1522 -0.4 -2.4 transcriptional regulator, LacI family compare
Atu2376 -0.4 -1.9 hypothetical protein compare
Atu4879 -0.4 -2.5 hypothetical protein compare
Atu0540 -0.4 -1.1 hypothetical protein compare
Atu5437 -0.4 -2.1 hypothetical protein compare
Atu1327 -0.4 -1.8 NADH-ubiquinone oxidoreductase compare
Atu3668 -0.4 -1.8 siderophore biosynthesis protein compare
Atu2809 -0.4 -2.5 cobalamin biosynthesis protein compare
Atu2072 -0.4 -2.3 ribosomal protein L11 methyltransferase compare
Atu4443 -0.4 -2.8 hypothetical protein compare
Atu3336 -0.4 -1.1 hypothetical protein compare
Atu8093 -0.4 -1.7 hypothetical protein compare
Atu2650 -0.4 -3.3 glycerol-3-phosphate dehydrogenase compare
Atu4137 -0.4 -1.8 hypothetical protein compare
Atu4584 -0.4 -2.6 TetR family transcriptional regulator compare
Atu4470 -0.4 -2.3 iron ABC transporter ATPase compare
Atu4446 -0.4 -2.9 hypothetical protein compare
Atu4876 -0.4 -3.0 oxidoreductase compare
Atu0153 -0.4 -1.8 transcriptional regulator, Fur family compare
Atu1141 -0.4 -1.8 Phosphoribosylglycinamide synthetase compare
Atu1468 -0.4 -2.5 hypothetical protein compare
Atu1380 -0.4 -2.2 zinc metallopeptidase compare
Atu0565 -0.4 -1.8 hypothetical protein compare
Atu3697 -0.4 -2.1 ATP-dependent protease LA 2 compare
Atu3755 -0.4 -1.7 phosphoribosylaminoimidazole carboxylase ATPase subunit compare
Atu1103 -0.4 -1.2 rRNA-adenine N6,N6-dimethyltransferase compare
Atu2073 -0.4 -1.8 membrane protein compare
Atu4880 -0.4 -2.7 AraC family transcriptional regulator compare
Atu3963 -0.4 -2.8 GntR family transcriptional regulator compare
Atu4894 -0.4 -1.9 transposase compare


Specific Phenotypes

For 2 genes in this experiment

For stress Cinnamic acid in Agrobacterium fabrum C58

For stress Cinnamic acid across organisms