Experiment set11IT080 for Agrobacterium fabrum C58

Compare to:

LB with Mandelic acid 5 mM

200 most detrimental genes:

  gene name fitness t score description  
Atu0026 +1.0 1.6 hypothetical protein compare
Atu1182 +0.9 1.4 hypothetical protein compare
Atu2017 +0.7 1.0 hypothetical protein compare
Atu4897 +0.7 1.4 hypothetical protein compare
Atu4677 +0.7 1.3 hypothetical protein compare
Atu2163 +0.7 1.3 hypothetical protein compare
Atu3423 +0.7 1.3 hypothetical protein compare
Atu0925 +0.6 1.9 hypothetical protein compare
Atu3775 +0.6 2.2 hypothetical protein compare
Atu6138 +0.6 4.1 Repressor of the acc and arc operons compare
Atu1466 +0.6 1.4 hypothetical protein compare
Atu0381 +0.6 1.4 hypothetical protein compare
Atu3497 +0.5 1.1 hypothetical protein compare
Atu0777 +0.5 0.9 hypothetical protein compare
Atu3566 +0.5 2.3 hypothetical protein compare
Atu4614 +0.5 3.1 glycosyltransferase compare
Atu3392 +0.5 1.8 methyltransferase compare
Atu4896 +0.5 1.1 acetyltransferase compare
Atu0201 +0.5 1.4 hypothetical protein compare
Atu0861 +0.5 1.2 hypothetical protein compare
Atu1185 +0.5 2.1 hypothetical protein compare
Atu1685 +0.5 0.9 hypothetical protein compare
Atu2067 +0.5 0.6 hypothetical protein compare
Atu3759 +0.4 1.0 hypothetical protein compare
Atu0551 +0.4 2.2 flagellar protein FLGA precursor compare
Atu3031 +0.4 0.9 hypothetical protein compare
Atu3712 +0.4 0.8 hypothetical protein compare
Atu1631 +0.4 1.8 two component response regulator compare
Atu4840 +0.4 2.2 hypothetical protein compare
Atu8200 +0.4 1.9 hypothetical protein compare
Atu4737 +0.4 1.6 hypothetical protein compare
Atu4454 +0.4 2.0 RpiR family transcriptional regulator compare
Atu2683 +0.4 1.1 hypothetical protein compare
Atu8018 +0.4 0.6 hypothetical protein compare
Atu1124 +0.4 2.0 hypothetical protein compare
Atu4459 +0.4 2.0 6-O-methylguanine DNA methyltransferase compare
Atu3044 +0.4 2.3 asparaginase compare
Atu0924 +0.4 2.1 hypothetical protein compare
Atu8053 +0.4 1.2 hypothetical protein compare
Atu0953 +0.4 0.6 hypothetical protein compare
Atu5164 +0.4 0.7 type IV secretion protein AvhB3 compare
Atu3634 +0.4 1.8 penicillin-binding protein dacf precursor compare
Atu0886 +0.4 0.8 hypothetical protein compare
Atu3428 +0.4 2.3 hypothetical protein compare
Atu5173 +0.4 1.3 dehydrogenase compare
Atu2215 +0.4 2.7 hypothetical protein compare
Atu2457 +0.4 2.0 hypothetical protein compare
Atu1737 +0.4 1.1 hypothetical protein compare
Atu0823 +0.4 2.8 ABC transporter, nucleotide binding/ATPase protein compare
Atu1170 +0.4 1.9 RhtB family transporter compare
Atu1154 +0.4 2.0 hypothetical protein compare
Atu4232 +0.4 2.0 GntR family transcriptional regulator compare
Atu1634 +0.4 0.6 hypothetical protein compare
Atu1566 +0.4 0.8 hypothetical protein compare
Atu1754 +0.4 1.0 hypothetical protein compare
Atu2294 +0.4 2.2 aminoglycoside N6'-acetyltransferase compare
Atu1302 +0.4 1.4 hypothetical protein compare
Atu2380 +0.4 1.2 hypothetical protein compare
Atu5155 +0.4 2.0 MarR family transcriptional regulator compare
Atu0684 +0.4 1.6 hypothetical protein compare
Atu5158 +0.3 2.1 hypothetical protein compare
Atu0519 +0.3 2.9 protein-glutamate methylesterase compare
Atu8029 +0.3 0.9 hypothetical protein compare
Atu4086 +0.3 2.4 gluconate 5-dehydrogenase compare
Atu1834 +0.3 2.0 mutT like protein compare
Atu0585 +0.3 1.4 hypothetical protein compare
Atu2166 +0.3 2.0 hypothetical protein compare
Atu4380 +0.3 1.5 Crp family transcriptional regulator compare
Atu4617 +0.3 2.1 dTDP-D-glucose-4,6-dehydratase compare
Atu4609 +0.3 2.6 glycosyltransferase compare
Atu4504 +0.3 2.6 MarR family transcriptional regulator compare
Atu4524 +0.3 2.0 oligopeptide ABC transporter permease compare
Atu1078 +0.3 1.7 hypothetical protein compare
Atu0671 +0.3 1.6 hypothetical protein compare
Atu4615 +0.3 2.3 glucose-1-phosphate thymidylyltransferase compare
Atu4746 +0.3 2.1 sugar ABC transporter permease compare
Atu2028 +0.3 1.0 transcriptional regulator, ArsR family compare
Atu1883 +0.3 1.9 hypothetical protein compare
Atu5064 +0.3 2.5 MarR family transcriptional regulator compare
Atu2789 +0.3 1.6 hypothetical protein compare
Atu0854 +0.3 1.6 hypothetical protein compare
Atu1863 +0.3 2.2 permease compare
Atu5167 +0.3 1.6 type IV secretion protein AvhB6 compare
Atu1191 +0.3 1.6 hypothetical protein compare
Atu1832 +0.3 2.7 membrane protein associated metalloendopeptidase compare
Atu0280 +0.3 0.9 hypothetical protein compare
Atu3721 +0.3 0.8 hypothetical protein compare
Atu4070 +0.3 1.7 sarcosine oxidase gamma subunit compare
Atu2236 +0.3 1.2 adenine phosphoribosyltransferase compare
Atu3128 +0.3 2.1 di-trans,poly-cis-decaprenylcistransferase compare
Atu2139 +0.3 2.0 aldehyde dehydrogenase compare
Atu1864 +0.3 1.9 putative homoserine/homoserine lactone efflux protein compare
Atu0788 +0.3 1.7 hypothetical protein compare
Atu0272 +0.3 1.7 transcriptional regulator, MarR family compare
Atu3627 +0.3 0.9 hypothetical protein compare
Atu1899 +0.3 1.7 ABC transporter, substrate binding protein (ribose) compare
Atu0956 +0.3 1.3 phage prohead protease compare
Atu3914 +0.3 2.0 alpha-amylase compare
Atu0986 +0.3 0.6 hypothetical protein compare
Atu5493 +0.3 1.4 hypothetical protein compare
Atu3523 +0.3 1.8 polysaccharide biosynthesis-like protein compare
Atu0116 +0.3 1.8 hypothetical protein compare
Atu4675 +0.3 1.7 dihydrodipicolinate synthase compare
Atu3780 +0.3 1.8 hypothetical protein compare
Atu0883 +0.3 1.6 hypothetical protein compare
Atu4442 +0.3 1.7 hypothetical protein compare
Atu2081 +0.3 1.9 aminoglycoside phosphotransferase compare
Atu1371 +0.3 1.6 glycerophosphoryl diester phosphodiesterase compare
Atu2204 +0.3 1.0 hypothetical protein compare
Atu4748 +0.3 1.9 D-tagatose 3-epimerase compare
Atu1293 +0.3 1.6 hypothetical protein compare
Atu8118 +0.3 1.4 putative universal stress protein compare
Atu0169 +0.3 2.0 hypothetical protein compare
Atu0193 +0.3 1.3 glutamine synthetase compare
Atu1882 +0.3 1.3 usg protein compare
Atu5007 +0.3 1.8 santhopine-responsive transcriptional repressor compare
Atu2428 +0.3 1.8 exopolysaccharide production protein PssB compare
Atu5166 +0.3 2.0 type IV secretion protein AvhB5 compare
Atu2216 +0.3 1.8 Xaa-Pro dipeptidase compare
Atu3121 +0.3 0.6 cold shock protein compare
Atu3189 +0.3 1.7 hypothetical protein compare
Atu1812 +0.3 1.3 hypothetical protein compare
Atu3313 +0.3 1.3 hypothetical protein compare
Atu3345 +0.3 0.9 6-pyruvoyl tetrahydrobiopterin synthase compare
Atu4608 +0.3 2.3 hypothetical protein compare
Atu4160 +0.3 1.4 RNA polymerase sigma factor compare
Atu1320 +0.3 1.6 acetyltransferase compare
Atu0820 +0.3 2.2 ABC transporter, substrate binding protein (sulfate) compare
Atu3624 +0.3 1.8 stress induced morphogen compare
Atu2150 +0.3 2.0 ABC transporter, nucleotide binding/ATPase protein compare
Atu1892 +0.3 1.2 hypothetical protein compare
Atu0553 +0.3 1.3 flagellar hook-basal body complex protein compare
Atu2248 +0.3 1.6 hypothetical protein compare
Atu1647 +0.3 1.8 ABC transporter, membrane spanning protein compare
Atu5148 +0.3 1.3 hypothetical protein compare
Atu1952 +0.3 0.5 hypothetical protein compare
Atu3763 +0.3 0.5 hypothetical protein compare
Atu3503 +0.3 1.4 ABC transporter permease compare
Atu2285 +0.3 1.9 transcriptional regulator, LuxR family compare
Atu1454 +0.3 2.0 siroheme synthase compare
Atu1645 +0.3 1.6 ABC transporter, substrate binding protein compare
Atu2450 +0.3 0.8 hypothetical protein compare
Atu8194 +0.3 0.8 hypothetical protein compare
Atu1001 +0.3 1.3 hypothetical protein compare
Atu1581 +0.3 0.8 hypothetical protein compare
Atu1252 +0.3 0.9 hypothetical protein compare
Atu5028 +0.3 1.3 IS426 transposase compare
Atu3066 +0.3 2.1 resiniferatoxin-binding, phosphotriesterase-like protein compare
Atu2234 +0.3 0.9 hypothetical protein compare
Atu3123 +0.3 1.8 30S ribosomal protein S21 compare
Atu0779 +0.3 1.9 peroxiredoxin compare
Atu2669 +0.3 1.0 RhtB family transporter compare
Atu4557 +0.3 1.5 sugar ABC transporter permease compare
Atu4239 +0.3 1.4 flavoprotein oxidoreductase compare
Atu0319 +0.3 0.5 ubiquinone biosynthesis protein compare
Atu5052 +0.3 1.6 small heat shock protein compare
Atu4081 +0.3 1.7 aspartate racemase compare
Atu4476 +0.3 2.0 hypothetical protein compare
Atu1531 +0.3 1.7 hypothetical protein compare
Atu6125 +0.3 1.7 conjugative transfer protein, Dtr system compare
Atu1911 +0.3 1.6 hypothetical protein compare
Atu3631 +0.2 1.1 hypothetical protein compare
Atu6003 +0.2 1.8 C compare
Atu3522 +0.2 1.0 glucans biosynthesis protein compare
Atu4094 +0.2 1.1 hypothetical protein compare
Atu2379 +0.2 1.7 phosphomannomutase compare
Atu8181 +0.2 1.3 hypothetical protein compare
Atu3353 +0.2 1.8 mannose-1-phosphate guanylyltransferase compare
Atu0627 +0.2 0.9 carboxymethylenebutenolidase compare
Atu1547 +0.2 2.0 magnesium transport protein compare
Atu0377 +0.2 1.5 hypothetical protein compare
Atu1208 +0.2 1.6 acyl-carrier-protein phosphodiesterase compare
Atu1102 +0.2 1.0 hypothetical protein compare
Atu2221 +0.2 1.5 Lipid A biosynthesis protein compare
Atu2529 +0.2 1.5 hypothetical protein compare
Atu1018 +0.2 1.5 hypothetical protein compare
Atu3577 +0.2 1.6 transcriptional regulator compare
Atu4501 +0.2 1.9 hypothetical protein compare
Atu3205 +0.2 1.7 hypothetical protein compare
Atu3465 +0.2 1.0 metallo-beta-lactamase superfamily protein compare
Atu6030 +0.2 1.5 ORF13 hypothetical protein compare
Atu3732 +0.2 1.7 hemolysin compare
Atu1865 +0.2 0.9 hypothetical protein compare
Atu2432 +0.2 0.5 hypothetical protein compare
Atu3258 +0.2 1.6 hypothetical protein compare
Atu4349 +0.2 1.2 hypothetical protein compare
Atu6040 +0.2 1.6 conjugal transfer protein compare
Atu3171 +0.2 1.5 sugar ABC transporter ATPase compare
Atu3644 +0.2 1.4 hypothetical protein compare
Atu1816 +0.2 1.7 ABC transporter, nucleotide binding/ATPase protein compare
Atu1058 +0.2 1.1 hypothetical protein compare
Atu0565 +0.2 1.2 hypothetical protein compare
Atu2104 +0.2 1.3 hypothetical protein compare
Atu3525 +0.2 1.6 hypothetical protein compare
Atu0665 +0.2 1.6 glycolate oxidase subunit compare
Atu4495 +0.2 1.6 hypothetical protein compare
Atu5169 +0.2 1.2 type IV secretion protein AvhB8 compare
Atu4369 +0.2 1.3 sugar ABC transporter substrate-binding protein compare
Atu3653 +0.2 1.2 hypothetical protein compare
Atu0821 +0.2 1.8 ABC transporter, membrane spanning protein compare


Specific Phenotypes

None in this experiment

For Agrobacterium fabrum C58 in stress experiments

For stress Mandelic acid across organisms