Experiment set11IT076 for Agrobacterium fabrum C58

Compare to:

LB with Acetovanillone 5 mM

200 most important genes:

  gene name fitness t score description  
Atu0912 -3.7 -2.2 Na+/H+ antiporter compare
Atu3730 -3.2 -2.1 hypothetical protein compare
Atu1446 -1.9 -3.2 two component response regulator compare
Atu0769 -1.8 -2.1 protoheme IX farnesyltransferase compare
Atu2207 -1.8 -4.1 two component sensor kinase compare
Atu3008 -1.7 -1.3 hypothetical protein compare
Atu0030 -1.6 -2.7 phosphocarrier protein HPr compare
Atu1030 -1.6 -1.4 GTP pyrophosphohydrolase/synthetase, RelA/SpoT family compare
Atu1810 -1.6 -1.3 hypothetical protein compare
Atu0953 -1.6 -1.5 hypothetical protein compare
Atu1739 -1.5 -5.8 permease compare
Atu4077 -1.4 -8.7 glycogen branching protein compare
Atu0824 -1.4 -1.8 hypothetical protein compare
Atu4616 -1.4 -1.1 dTDP-4-dehydrorhamnose reductase compare
Atu2125 -1.4 -2.1 ABC transporter, nucleotide binding/ATPase protein compare
Atu3469 -1.3 -2.5 phosphoglyceromutase compare
Atu4618 -1.3 -7.9 dTDP-rhamnose-3,5-epimerase compare
Atu0031 -1.2 -1.9 PTS system, IIA component compare
Atu2163 -1.2 -1.0 hypothetical protein compare
Atu1204 -1.1 -5.9 potassium uptake protein compare
Atu3496 -1.1 -1.8 hypothetical protein compare
Atu0051 -1.1 -4.5 two component sensor kinase compare
Atu3183 -1.1 -1.0 hypothetical protein compare
Atu1327 -1.1 -2.3 NADH-ubiquinone oxidoreductase compare
Atu2585 -1.0 -4.3 hypothetical protein compare
Atu3121 -1.0 -1.4 cold shock protein compare
Atu3336 -1.0 -3.5 hypothetical protein compare
Atu3207 -1.0 -6.6 diguanylate cyclase compare
Atu1449 -1.0 -5.9 potassium uptake protein compare
Atu0142 -1.0 -3.1 cytochrome o ubiquinol oxidase subunit II compare
Atu0354 -1.0 -1.5 ferric uptake regulator compare
Atu0029 -1.0 -5.0 S-adenosylhomocysteine hydrolase compare
Atu1904 -0.9 -1.6 transcriptional regulator compare
Atu0784 -0.9 -3.3 hypothetical protein compare
Atu2614 -0.9 -3.3 hypothetical protein compare
Atu3910 -0.9 -3.9 LamB/YcsF family protein compare
Atu0777 -0.9 -1.0 hypothetical protein compare
Atu0923 -0.9 -2.8 hypothetical protein compare
Atu1513 -0.9 -4.4 ABC excinuclease subunit A compare
Atu2590 -0.9 -5.1 hypothetical protein compare
Atu1445 -0.8 -2.9 two component sensor kinase compare
Atu2433 -0.8 -1.3 hypothetical protein compare
Atu3798 -0.8 -3.4 TetR family transcriptional regulator compare
Atu2249 -0.8 -1.1 hypothetical protein compare
Atu0039 -0.8 -1.6 imidazoleglycerol-phosphate synthase cyclase compare
Atu0645 -0.8 -1.0 hypothetical protein compare
Atu2583 -0.8 -5.7 glycosyltransferase compare
Atu4773 -0.8 -1.6 two component response regulator compare
Atu3757 -0.8 -2.0 hypothetical protein compare
Atu0331 -0.7 -2.3 sigma-54 modulation protein compare
Atu4161 -0.7 -1.2 hypothetical protein compare
Atu4149 -0.7 -5.3 UDP-glucose 6-dehydrogenase compare
Atu0184 -0.7 -1.7 glucokinase compare
Atu4641 -0.7 -2.6 LysR family transcriptional regulator compare
Atu6098 -0.7 -0.9 transcriptional regulator, HTH family compare
Atu2577 -0.7 -5.8 ABC transporter, nucleotide binding/ATPase protein compare
Atu0050 -0.7 -3.6 two component response regulator compare
Atu8052 -0.7 -1.6 hypothetical protein compare
Atu2592 -0.7 -3.9 hypothetical protein compare
Atu1131 -0.7 -4.7 outer membrane protein compare
Atu2684 -0.7 -0.8 hypothetical protein compare
Atu2582 -0.7 -3.8 UDP-glucose/GDP-mannose dehydrogenase compare
Atu2591 -0.7 -3.7 glucosyltransferase compare
Atu4148 -0.7 -2.4 UDP-glucuronic acid epimerase compare
Atu3763 -0.7 -1.1 hypothetical protein compare
Atu3583 -0.7 -3.1 hypothetical protein compare
Atu2439 -0.7 -1.3 hypothetical protein compare
Atu0977 -0.7 -1.9 serine protease DO-like protease compare
Atu0319 -0.7 -1.1 ubiquinone biosynthesis protein compare
Atu0419 -0.7 -1.6 two component sensor kinase compare
Atu0659 -0.7 -3.1 NTP pyrophosphohydrolase, MutT family compare
Atu2073 -0.7 -3.3 membrane protein compare
Atu3663 -0.7 -1.3 hypothetical protein compare
Atu2286 -0.7 -1.5 hypothetical protein compare
Atu2584 -0.6 -2.2 hypothetical protein compare
Atu1344 -0.6 -1.3 hypothetical protein compare
Atu0638 -0.6 -2.1 hypothetical protein compare
Atu3505 -0.6 -3.1 3-hydroxyisobutyryl-CoA hydrolase compare
Atu3045 -0.6 -1.3 hypothetical protein compare
Atu1444 -0.6 -2.0 nitrogen regulation protein compare
Atu3739 -0.6 -1.1 phosphoglycerate kinase compare
Atu1470 -0.6 -0.6 Camphor resistance protein compare
Atu1503 -0.6 -0.9 hypothetical protein compare
Atu1439 -0.6 -1.2 hypothetical protein compare
Atu2237 -0.6 -2.8 cytochrome c1 compare
Atu3353 -0.6 -3.9 mannose-1-phosphate guanylyltransferase compare
Atu0701 -0.6 -3.2 GGDEF family protein compare
Atu3009 -0.6 -0.7 exopolysaccharide production protein compare
Atu0606 -0.6 -1.8 hypothetical protein compare
Atu6036 -0.5 -1.2 entry-exclusion protein compare
Atu2766 -0.5 -4.9 NAD-glutamate dehydrogenase compare
Atu4366 -0.5 -2.4 short chain dehydrogenase compare
Atu2084 -0.5 -0.6 hypothetical protein compare
Atu1836 -0.5 -1.4 hypothetical protein compare
Atu1559 -0.5 -1.4 hypothetical protein compare
Atu0533 -0.5 -2.1 putative inhibitor of septum formation compare
Atu0572 -0.5 -1.3 hypothetical protein compare
Atu0566 -0.5 -1.5 hypothetical protein compare
Atu0535 -0.5 -2.4 hypothetical protein compare
Atu1614 -0.5 -3.4 phosphoglycolate phosphatase compare
Atu1592 -0.5 -3.6 hypothetical protein compare
Atu3327 -0.5 -2.6 succinoglycan exopolysaccharide synthesis protein compare
Atu2057 -0.5 -1.4 DNA helicase II compare
Atu0972 -0.5 -1.9 lipA protein compare
Atu6114 -0.5 -1.0 hypothetical protein compare
Atu1566 -0.5 -0.8 hypothetical protein compare
Atu1878 -0.5 -1.5 hypothetical protein compare
Atu2038 -0.5 -3.7 hypothetical protein compare
Atu0242 -0.5 -2.8 carbon-nitrogen hydrolase compare
Atu2183 -0.5 -3.2 lipopolysaccharide core biosynthesis mannosyltransferase compare
Atu8181 -0.5 -1.8 hypothetical protein compare
Atu0086 -0.5 -0.6 ribosome-binding factor A compare
Atu4613 -0.5 -3.5 glycosyltransferase compare
Atu0885 -0.5 -1.8 hypothetical protein compare
Atu0153 -0.5 -1.7 transcriptional regulator, Fur family compare
Atu2620 -0.5 -0.9 hypothetical protein compare
Atu0181 -0.5 -1.5 hypothetical protein compare
Atu2783 -0.5 -1.8 acetyltransferase compare
Atu4610 -0.5 -3.0 sugar nucleotide epimerase/dehydratase compare
Atu1100 -0.5 -2.9 hypothetical protein compare
Atu5157 -0.5 -1.7 hypothetical protein compare
Atu1759 -0.5 -3.0 L-serine dehydratase compare
Atu1176 -0.5 -1.8 hypothetical protein compare
Atu3913 -0.5 -2.6 biotin carboxylase compare
Atu3892 -0.5 -1.7 hypothetical protein compare
Atu0503 -0.5 -3.5 enoyl-CoA hydratase compare
Atu0677 -0.5 -1.3 hypothetical protein compare
Atu0025 -0.5 -1.0 hypothetical protein compare
Atu1619 -0.4 -1.1 protein-export membrane protein SECG compare
Atu4099 -0.4 -2.5 hypothetical protein compare
Atu0943 -0.4 -1.3 hypothetical protein compare
Atu1286 -0.4 -1.5 hypothetical protein compare
Atu1678 -0.4 -2.2 S-adenosylmethionine tRNA ribosyltransferase-isomerase compare
Atu1364 -0.4 -2.3 ATP-dependent Clp protease, ATP-binding subunit compare
Atu8143 -0.4 -1.6 hypothetical protein compare
Atu3558 -0.4 -2.2 glycosyltransferase compare
Atu0340 -0.4 -1.1 SAM dependent methyltransferase compare
Atu2722 -0.4 -3.0 porin compare
Atu1354 -0.4 -0.6 6-hydroxymethyl-7,8-dihydropterin pyrophosphokinase compare
Atu8170 -0.4 -1.1 hypothetical protein compare
Atu5088 -0.4 -1.3 hypothetical protein compare
Atu4840 -0.4 -1.1 hypothetical protein compare
Atu1685 -0.4 -0.6 hypothetical protein compare
Atu1717 -0.4 -3.0 long-chain fatty acid transport protein compare
Atu3575 -0.4 -2.3 xylose ABC transporter permease compare
Atu1495 -0.4 -1.1 hypothetical protein compare
Atu0101 -0.4 -1.7 cytochrome c compare
Atu1486 -0.4 -2.0 hypothetical protein compare
Atu1906 -0.4 -1.5 ABC transporter, membrane spanning protein compare
Atu0434 -0.4 -1.1 2'-deoxycytidine 5'-triphosphate deaminase compare
Atu8180 -0.4 -2.1 hypothetical protein compare
Atu3001 -0.4 -0.8 hypothetical protein compare
Atu4093 -0.4 -1.1 hypothetical protein compare
Atu2169 -0.4 -1.8 hypothetical protein compare
Atu0689 -0.4 -2.8 ribosomal large subunit pseudouridine synthase B compare
Atu3293 -0.4 -2.2 D-amino acid dehydrogenase small subunit compare
Atu3688 -0.4 -2.2 iron(III ABC transporter permease dicitrate ABC transporter permease compare
Atu0445 -0.4 -1.9 hypothetical protein compare
Atu4067 -0.4 -2.0 hypothetical protein compare
Atu0658 -0.4 -2.8 phosphate permease compare
Atu4791 -0.4 -1.4 hypothetical protein compare
Atu4615 -0.4 -2.8 glucose-1-phosphate thymidylyltransferase compare
Atu3201 -0.4 -2.3 TetR family transcriptional regulator compare
Atu3884 -0.4 -2.8 hypothetical protein compare
Atu1031 -0.4 -1.0 hypothetical protein compare
Atu0845 -0.4 -1.5 hypothetical protein compare
Atu3311 -0.4 -2.9 phosphomannose isomerase compare
Atu1110 -0.4 -1.4 cytosol aminopeptidase compare
Atu8096 -0.4 -0.8 hypothetical protein compare
Atu3912 -0.4 -2.4 hypothetical protein compare
Atu1074 -0.4 -2.8 NAD/NADP dependent oxidoreductase compare
Atu0524 -0.4 -2.4 transcriptional regulator, LuxR family compare
Atu0138 -0.4 -2.3 surfeit 1 compare
Atu2293 -0.4 -1.1 hypothetical protein compare
Atu3701 -0.4 -2.1 glutathione S-transferase compare
Atu4617 -0.4 -1.8 dTDP-D-glucose-4,6-dehydratase compare
Atu4120 -0.4 -2.8 mandelate racemase compare
Atu3674 -0.4 -0.9 hypothetical protein compare
Atu0210 -0.4 -2.1 hypothetical protein compare
Atu5471 -0.4 -1.4 hypothetical protein compare
Atu1481 -0.4 -1.3 hypothetical protein compare
Atu3668 -0.4 -1.5 siderophore biosynthesis protein compare
Atu4769 -0.4 -1.7 hypothetical protein compare
Atu4078 -0.4 -2.9 glycogen phosphorylase compare
Atu0598 -0.4 -2.4 phosphogluconate dehydratase compare
Atu2665 -0.4 -2.3 transcriptional regulator, MarR family compare
Atu0886 -0.4 -0.7 hypothetical protein compare
Atu0939 -0.4 -1.1 PemI protein compare
Atu0189 -0.4 -1.1 ABC transporter, membrane spanning protein (peptide) compare
Atu3539 -0.4 -1.6 hypothetical protein compare
Atu3598 -0.4 -0.8 thiol:disulfide interchange protein compare
Atu0295 -0.4 -0.8 hypothetical protein compare
Atu2259 -0.4 -1.8 MFS permease compare
Atu4614 -0.4 -2.1 glycosyltransferase compare
Atu8034 -0.4 -0.6 hypothetical protein compare
Atu1607 -0.4 -1.4 DNA repair protein compare
Atu0225 -0.4 -0.6 hypothetical protein compare
Atu1902 -0.4 -2.0 transketolase compare
Atu8165 -0.4 -0.9 hypothetical protein compare
Atu4469 -0.3 -1.1 iron ABC transporter permease compare


Specific Phenotypes

For 16 genes in this experiment

For stress Acetovanillone in Agrobacterium fabrum C58

For stress Acetovanillone across organisms