Experiment set11IT075 for Agrobacterium fabrum C58

Compare to:

LB with Acetovanillone 5 mM

200 most important genes:

  gene name fitness t score description  
Atu0912 -3.7 -2.2 Na+/H+ antiporter compare
Atu1446 -2.9 -3.9 two component response regulator compare
Atu3469 -2.4 -4.2 phosphoglyceromutase compare
Atu3001 -1.9 -2.3 hypothetical protein compare
Atu0142 -1.7 -2.8 cytochrome o ubiquinol oxidase subunit II compare
Atu2125 -1.7 -2.0 ABC transporter, nucleotide binding/ATPase protein compare
Atu4616 -1.6 -2.3 dTDP-4-dehydrorhamnose reductase compare
Atu0184 -1.5 -4.1 glucokinase compare
Atu1327 -1.4 -4.2 NADH-ubiquinone oxidoreductase compare
Atu2207 -1.3 -2.0 two component sensor kinase compare
Atu4317 -1.3 -3.3 TetR family transcriptional regulator compare
Atu4077 -1.3 -7.5 glycogen branching protein compare
Atu0824 -1.2 -1.7 hypothetical protein compare
Atu3910 -1.2 -4.6 LamB/YcsF family protein compare
Atu1204 -1.2 -4.2 potassium uptake protein compare
Atu8087 -1.2 -0.8 putative peptidoglycan binding protein compare
Atu2585 -1.1 -4.0 hypothetical protein compare
Atu1739 -1.1 -3.4 permease compare
Atu0777 -1.1 -1.2 hypothetical protein compare
Atu3739 -1.1 -2.8 phosphoglycerate kinase compare
Atu0115 -1.0 -1.4 hypothetical protein compare
Atu0040 -1.0 -1.8 phosphoribosylformino-5-aminoimidazole carboxamide ribotide isomerase compare
Atu0050 -1.0 -4.7 two component response regulator compare
Atu3598 -1.0 -1.9 thiol:disulfide interchange protein compare
Atu2368 -1.0 -1.3 hypothetical protein compare
Atu6098 -1.0 -1.2 transcriptional regulator, HTH family compare
Atu0977 -1.0 -3.3 serine protease DO-like protease compare
Atu2591 -1.0 -6.2 glucosyltransferase compare
Atu4148 -1.0 -3.0 UDP-glucuronic acid epimerase compare
Atu2084 -0.9 -1.0 hypothetical protein compare
Atu1683 -0.9 -2.0 hypothetical protein compare
Atu2017 -0.9 -1.1 hypothetical protein compare
Atu0354 -0.9 -1.7 ferric uptake regulator compare
Atu2592 -0.9 -4.7 hypothetical protein compare
Atu1566 -0.9 -1.1 hypothetical protein compare
Atu0434 -0.9 -1.7 2'-deoxycytidine 5'-triphosphate deaminase compare
Atu0025 -0.9 -2.1 hypothetical protein compare
Atu1449 -0.9 -3.7 potassium uptake protein compare
Atu2439 -0.9 -1.8 hypothetical protein compare
Atu1030 -0.9 -0.6 GTP pyrophosphohydrolase/synthetase, RelA/SpoT family compare
Atu2590 -0.8 -5.5 hypothetical protein compare
Atu2073 -0.8 -3.6 membrane protein compare
Atu0030 -0.8 -1.7 phosphocarrier protein HPr compare
Atu0051 -0.8 -4.3 two component sensor kinase compare
Atu1513 -0.8 -4.2 ABC excinuclease subunit A compare
Atu4890 -0.8 -1.5 IS426 transposase compare
Atu0331 -0.8 -1.8 sigma-54 modulation protein compare
Atu2582 -0.8 -4.0 UDP-glucose/GDP-mannose dehydrogenase compare
Atu0845 -0.8 -2.9 hypothetical protein compare
Atu0141 -0.8 -1.2 cytochrome O ubiquinol oxidase subunit I compare
Atu3486 -0.8 -2.1 DeoR family transcriptional regulator compare
Atu2583 -0.8 -5.4 glycosyltransferase compare
Atu2239 -0.7 -2.8 ubiquinol-cytochrome C reductase iron-sulfur subunit compare
Atu0876 -0.7 -1.5 superoxide dismutase compare
Atu4773 -0.7 -1.1 two component response regulator compare
Atu3798 -0.7 -4.0 TetR family transcriptional regulator compare
Atu0029 -0.7 -3.9 S-adenosylhomocysteine hydrolase compare
Atu4149 -0.7 -5.3 UDP-glucose 6-dehydrogenase compare
Atu1223 -0.7 -1.2 hypothetical protein compare
Atu1131 -0.7 -4.6 outer membrane protein compare
Atu2083 -0.7 -2.4 DNA repair protein RecN compare
Atu1229 -0.7 -2.1 hypothetical protein compare
Atu1445 -0.7 -2.5 two component sensor kinase compare
Atu0189 -0.7 -2.3 ABC transporter, membrane spanning protein (peptide) compare
Atu3727 -0.7 -3.1 hypothetical protein compare
Atu0703 -0.7 -1.9 keto-hydroxyglutarate-aldolase/keto-deoxy- phosphogluconate aldolase compare
Atu4618 -0.6 -4.2 dTDP-rhamnose-3,5-epimerase compare
Atu0630 -0.6 -1.9 hypothetical protein compare
Atu2577 -0.6 -5.2 ABC transporter, nucleotide binding/ATPase protein compare
Atu0923 -0.6 -2.2 hypothetical protein compare
Atu2766 -0.6 -5.5 NAD-glutamate dehydrogenase compare
Atu2648 -0.6 -2.6 hypothetical protein compare
Atu2614 -0.6 -2.5 hypothetical protein compare
Atu8096 -0.6 -1.2 hypothetical protein compare
Atu3730 -0.6 -0.8 hypothetical protein compare
Atu2684 -0.6 -1.2 hypothetical protein compare
Atu3911 -0.6 -3.0 hypothetical protein compare
Atu0659 -0.6 -2.9 NTP pyrophosphohydrolase, MutT family compare
Atu3707 -0.6 -1.9 phosphoserine aminotransferase compare
Atu0419 -0.6 -1.3 two component sensor kinase compare
Atu1439 -0.6 -1.4 hypothetical protein compare
Atu1722 -0.6 -2.1 hypothetical protein compare
Atu2665 -0.6 -3.8 transcriptional regulator, MarR family compare
Atu0386 -0.6 -1.4 hypothetical protein compare
Atu2238 -0.6 -2.5 ubiquinol-cytochrome c reductase cytochrome b subunit compare
Atu1645 -0.6 -3.4 ABC transporter, substrate binding protein compare
Atu8158 -0.6 -1.6 hypothetical protein compare
Atu4137 -0.5 -2.3 hypothetical protein compare
Atu3697 -0.5 -2.9 ATP-dependent protease LA 2 compare
Atu0566 -0.5 -1.1 hypothetical protein compare
Atu4099 -0.5 -3.3 hypothetical protein compare
Atu1163 -0.5 -1.2 exopolysaccharide II synthesis transcriptional activator ExpG compare
Atu4161 -0.5 -0.9 hypothetical protein compare
Atu1759 -0.5 -3.4 L-serine dehydratase compare
Atu8025 -0.5 -1.0 hypothetical protein compare
Atu3293 -0.5 -2.9 D-amino acid dehydrogenase small subunit compare
Atu3505 -0.5 -2.5 3-hydroxyisobutyryl-CoA hydrolase compare
Atu3468 -0.5 -0.5 hypothetical protein compare
Atu1110 -0.5 -1.6 cytosol aminopeptidase compare
Atu0943 -0.5 -1.5 hypothetical protein compare
Atu1518 -0.5 -2.4 transcriptional regulator, Fur family compare
Atu0689 -0.5 -3.9 ribosomal large subunit pseudouridine synthase B compare
Atu1546 -0.5 -1.2 transcriptional regulator, MerR family compare
Atu3336 -0.5 -1.3 hypothetical protein compare
Atu0886 -0.5 -1.1 hypothetical protein compare
Atu2169 -0.5 -2.5 hypothetical protein compare
Atu3201 -0.5 -2.9 TetR family transcriptional regulator compare
Atu0601 -0.5 -3.1 oxidoreductase compare
Atu0322 -0.5 -3.3 enoyl CoA hydratase compare
Atu6189 -0.5 -0.9 protein secretion chaperone compare
Atu2640 -0.5 -2.2 hypothetical protein compare
Atu3291 -0.5 -2.5 Lpr family transcriptional regulator compare
Atu4153 -0.5 -2.7 aldehyde dehydrogenase compare
Atu2584 -0.5 -2.1 hypothetical protein compare
Atu4896 -0.5 -0.7 acetyltransferase compare
Atu3115 -0.5 -2.2 TetR family transcriptional regulator compare
Atu1026 -0.5 -1.4 hypothetical protein compare
Atu3909 -0.5 -3.7 hypothetical protein compare
Atu2056 -0.5 -1.7 hypothetical protein compare
Atu3207 -0.5 -3.4 diguanylate cyclase compare
Atu0905 -0.5 -2.3 dnaK suppressor protein compare
Atu1559 -0.5 -1.8 hypothetical protein compare
Atu2270 -0.5 -0.8 ATP-dependent Clp protease, proteolytic subunit compare
Atu3342 -0.5 -2.2 trehalose utilization-like protein compare
Atu1902 -0.5 -2.0 transketolase compare
Atu3864 -0.5 -1.6 hypothetical protein compare
Atu4786 -0.5 -1.7 iron ABC transporter ATPase compare
Atu0784 -0.4 -1.3 hypothetical protein compare
Atu2464 -0.4 -1.1 formyltetrahydrofolate deformylase compare
Atu0049 -0.4 -2.0 hypothetical protein compare
Atu8169 -0.4 -1.5 hypothetical protein compare
Atu0535 -0.4 -1.6 hypothetical protein compare
Atu4385 -0.4 -2.0 hypothetical protein compare
Atu2057 -0.4 -1.2 DNA helicase II compare
Atu0592 -0.4 -2.4 ABC transporter, membrane spanning protein compare
Atu1291 -0.4 -1.2 hypothetical protein compare
Atu2662 -0.4 -0.8 acetyltransferase compare
Atu5160 -0.4 -2.0 transcriptional regulator protein compare
Atu0638 -0.4 -1.5 hypothetical protein compare
Atu8012 -0.4 -1.1 hypothetical protein compare
Atu0999 -0.4 -2.7 magnesium transport protein compare
Atu1971 -0.4 -1.2 hypothetical protein compare
Atu1646 -0.4 -2.2 ABC transporter, nucleotide binding/ATPase protein compare
Atu1241 -0.4 -1.9 hypothetical protein compare
Atu8094 -0.4 -1.4 hypothetical protein compare
Atu3030 -0.4 -1.9 hypothetical protein compare
Atu1038 -0.4 -1.3 two component response regulator compare
Atu3583 -0.4 -1.9 hypothetical protein compare
Atu2478 -0.4 -1.8 hypothetical protein compare
Atu2130 -0.4 -2.0 hypothetical protein compare
Atu3969 -0.4 -1.8 sugar ABC transporter permease compare
Atu1074 -0.4 -3.2 NAD/NADP dependent oxidoreductase compare
Atu2317 -0.4 -1.9 hypothetical protein compare
Atu8179 -0.4 -1.9 hypothetical protein compare
Atu2722 -0.4 -2.9 porin compare
Atu0851 -0.4 -1.8 hypothetical protein compare
Atu4754 -0.4 -2.5 amino acid ABC transporter permease compare
Atu2251 -0.4 -2.4 NTP pyrophosphohydrolase, MutT family compare
Atu1175 -0.4 -0.8 hypothetical protein compare
Atu0445 -0.4 -1.3 hypothetical protein compare
Atu0039 -0.4 -0.9 imidazoleglycerol-phosphate synthase cyclase compare
Atu2433 -0.4 -0.7 hypothetical protein compare
Atu3467 -0.4 -0.6 hypothetical protein compare
Atu0503 -0.4 -3.1 enoyl-CoA hydratase compare
Atu8203 -0.4 -1.6 hypothetical protein compare
Atu3122 -0.4 -1.1 cold shock protein compare
Atu2192 -0.4 -0.7 hypothetical protein compare
Atu0295 -0.4 -1.1 hypothetical protein compare
Atu1129 -0.4 -2.0 excinuclease ABC chain C compare
Atu0339 -0.4 -1.3 hypothetical protein compare
Atu0768 -0.4 -2.5 cytochrome-c oxidase chain I compare
Atu2450 -0.4 -1.1 hypothetical protein compare
Atu1779 -0.4 -1.1 hypothetical protein compare
Atu4160 -0.4 -2.1 RNA polymerase sigma factor compare
Atu3136 -0.4 -1.3 ABC transporter permease compare
Atu3884 -0.4 -2.7 hypothetical protein compare
Atu4055 -0.4 -2.4 endo-1,3-1,4-beta-glycanase compare
Atu6045 -0.4 -1.1 replication protein C compare
Atu4446 -0.4 -2.2 hypothetical protein compare
Atu2442 -0.4 -1.2 hypothetical protein compare
Atu4425 -0.4 -1.6 inosine-uridine preferring nucleoside hydrolase compare
Atu0299 -0.4 -1.9 hypothetical protein compare
Atu1113 -0.4 -1.6 dehydrogenase compare
Atu3912 -0.4 -2.0 hypothetical protein compare
Atu2267 -0.4 -2.1 hypothetical protein compare
Atu1535 -0.4 -0.8 cytochrome c oxidase, FixQ chain compare
Atu5107 -0.4 -1.8 hypothetical protein compare
Atu8156 -0.4 -1.4 hypothetical protein compare
Atu2376 -0.4 -1.6 hypothetical protein compare
Atu3634 -0.4 -1.8 penicillin-binding protein dacf precursor compare
Atu0036 -0.4 -1.5 hypothetical protein compare
Atu0062 -0.4 -1.9 transcriptional regulator, ROK family compare
Atu2790 -0.4 -1.3 3-isopropylmalate dehydratase, small subunit compare
Atu1176 -0.4 -1.2 hypothetical protein compare
Atu1847 -0.4 -0.8 hypothetical protein compare
Atu8088 -0.4 -0.8 hypothetical protein compare
Atu0836 -0.4 -0.7 Glutathione-S-transferase compare
Atu3653 -0.4 -1.6 hypothetical protein compare
Atu0934 -0.4 -2.0 hypothetical protein compare
Atu0723 -0.4 -0.7 FAD dependent oxidoreductase compare


Specific Phenotypes

For 25 genes in this experiment

For stress Acetovanillone in Agrobacterium fabrum C58

For stress Acetovanillone across organisms