Experiment set11IT074 for Agrobacterium fabrum C58

Compare to:

LB with Rosmarinic acid 5 mM

200 most detrimental genes:

  gene name fitness t score description  
Atu5540 +1.2 2.2 hypothetical protein compare
Atu1182 +0.9 1.8 hypothetical protein compare
Atu0876 +0.9 2.1 superoxide dismutase compare
Atu8161 +0.8 2.0 hypothetical protein compare
Atu0107 +0.8 2.3 hypothetical protein compare
Atu0026 +0.8 1.2 hypothetical protein compare
Atu0413 +0.7 1.3 stress induced protein compare
Atu2204 +0.6 1.6 hypothetical protein compare
Atu4897 +0.6 1.2 hypothetical protein compare
Atu2067 +0.6 0.9 hypothetical protein compare
Atu2017 +0.6 1.1 hypothetical protein compare
Atu0809 +0.6 1.8 hypothetical protein compare
Atu5513 +0.6 2.0 cold shock protein compare
Atu8052 +0.6 1.3 hypothetical protein compare
Atu8056 +0.6 1.0 hypothetical protein compare
Atu0640 +0.6 1.6 hypothetical protein compare
Atu2163 +0.6 0.7 hypothetical protein compare
Atu0188 +0.6 2.2 ABC transporter, membrane spanning protein (peptide) compare
Atu8087 +0.5 0.9 putative peptidoglycan binding protein compare
Atu1098 +0.5 1.2 hypothetical protein compare
Atu3218 +0.5 1.7 hypothetical protein compare
Atu3554 +0.5 1.5 hypothetical protein compare
Atu5468 +0.5 1.4 hypothetical protein compare
Atu1220 +0.5 3.0 methylated-DNA--protein-cysteine methyltransferase compare
Atu0479 +0.5 3.5 ABC transporter, substrate binding protein (amino acid) compare
Atu2325 +0.5 1.4 hypothetical protein compare
Atu0931 +0.4 3.4 penicillin binding protein compare
Atu1325 +0.4 1.9 acetyltransferase compare
Atu1510 +0.4 2.5 hypothetical protein compare
Atu0562 +0.4 1.7 flagellar motor switch protein FliN compare
Atu0925 +0.4 1.5 hypothetical protein compare
Atu1699 +0.4 1.3 molybdopterin-guanine dinucleotide biosynthesis protein B compare
Atu0585 +0.4 1.6 hypothetical protein compare
Atu3759 +0.4 1.0 hypothetical protein compare
Atu1421 +0.4 1.8 hypothetical protein compare
Atu1724 +0.4 2.0 hypothetical protein compare
Atu0551 +0.4 1.6 flagellar protein FLGA precursor compare
Atu0578 +0.4 2.0 FlbT post-transcriptional regulator of flagellin compare
Atu5101 +0.4 2.4 hypothetical protein compare
Atu1644 +0.4 1.5 hypothetical protein compare
Atu1646 +0.4 1.5 ABC transporter, nucleotide binding/ATPase protein compare
Atu0124 +0.4 2.1 hypothetical protein compare
Atu1892 +0.4 1.1 hypothetical protein compare
Atu0681 +0.4 2.0 hypothetical protein compare
Atu1447 +0.4 1.4 two component sensor kinase compare
Atu3926 +0.4 1.4 translation initiation inhibitor compare
Atu5130 +0.4 1.3 attachment protein compare
Atu2507 +0.4 2.6 ABC transporter, membrane spanning protein (sugar) compare
Atu0117 +0.4 1.9 hypothetical protein compare
Atu5145 +0.4 1.4 acetyltransferase compare
Atu4724 +0.4 1.2 hypothetical protein compare
Atu4407 +0.4 1.2 periplasmic nitrate reductase, NapD protein compare
Atu4677 +0.4 0.7 hypothetical protein compare
Atu2221 +0.4 1.6 Lipid A biosynthesis protein compare
Atu2201 +0.4 0.8 hydrolase compare
Atu8035 +0.4 0.8 hypothetical protein compare
Atu8177 +0.4 2.0 hypothetical protein compare
Atu5449 +0.4 1.8 heat-shock protein compare
Atu4452 +0.4 1.8 hypothetical protein compare
Atu0645 +0.4 0.7 hypothetical protein compare
Atu0806 +0.4 3.0 hypothetical protein compare
Atu0528 +0.4 1.1 large conductance mechanosensitive channel protein compare
Atu5167 +0.4 1.8 type IV secretion protein AvhB6 compare
Atu2694 +0.4 1.1 hypothetical protein compare
Atu3886 +0.4 2.5 lysophospholipase compare
Atu8018 +0.4 0.6 hypothetical protein compare
Atu2432 +0.4 1.0 hypothetical protein compare
Atu2352 +0.4 1.1 hypothetical protein compare
Atu5470 +0.4 1.4 hypothetical protein compare
Atu4072 +0.4 0.8 nodulation protein N compare
Atu1577 +0.4 1.9 ABC transporter, substrate binding protein (amino acid) compare
Atu1629 +0.4 0.8 transcriptional regulator, ArsR family compare
Atu1334 +0.4 2.1 aspartate transaminase compare
Atu8025 +0.4 0.8 hypothetical protein compare
Atu5427 +0.4 1.8 hypothetical protein compare
Atu0956 +0.4 1.2 phage prohead protease compare
Atu1905 +0.4 1.9 short chain dehydrogenase compare
Atu1056 +0.4 2.0 hypothetical protein compare
Atu0573 +0.4 1.9 transcriptional regulator compare
Atu0631 +0.4 1.8 molybdenum cofactor biosynthesis protein B compare
Atu3610 +0.4 1.5 transporter compare
Atu2209 +0.4 1.5 pyrroline-5-carboxylate reductase compare
Atu8158 +0.3 1.0 hypothetical protein compare
Atu3313 +0.3 1.7 hypothetical protein compare
Atu0167 +0.3 1.7 transcriptional regulator, AraC family compare
Atu8023 +0.3 0.9 hypothetical protein compare
Atu1896 +0.3 1.5 hypothetical protein compare
Atu3392 +0.3 1.6 methyltransferase compare
Atu0467 +0.3 1.4 hypothetical protein compare
Atu1116 +0.3 2.4 two component response regulator compare
Atu5159 +0.3 1.8 hypothetical protein compare
Atu1754 +0.3 0.9 hypothetical protein compare
Atu3415 +0.3 1.4 ABC transporter substrate binding protein compare
Atu3226 +0.3 2.0 GntR family transcriptional regulator compare
Atu2729 +0.3 0.9 hypothetical protein compare
Atu1688 +0.3 1.6 indole-3-glycerol-phosphate synthase compare
Atu2631 +0.3 1.6 hypothetical protein compare
Atu1472 +0.3 1.5 hydrolase compare
Atu0303 +0.3 1.3 hypothetical protein compare
Atu0612 +0.3 1.8 ABC transporter, membrane spanning protein compare
Atu1175 +0.3 0.8 hypothetical protein compare
Atu1264 +0.3 1.6 hypothetical protein compare
Atu3120 +0.3 0.5 hypothetical protein compare
Atu5421 +0.3 1.9 ABC transporter membrane spanning protein (putrescine) compare
Atu1830 +0.3 1.3 bacterioferritin comigratory protein compare
Atu1857 +0.3 2.2 inositol monophosphatase family protein compare
Atu1369 +0.3 1.8 HIT family protein compare
Atu3286 +0.3 1.6 ABC transporter permease compare
Atu1203 +0.3 0.9 hypothetical protein compare
Atu1070 +0.3 1.5 hypothetical protein compare
Atu1642 +0.3 1.0 hypothetical protein compare
Atu0553 +0.3 2.0 flagellar hook-basal body complex protein compare
Atu2388 +0.3 1.7 ABC transporter, nucleotide binding/ATPase protein (nitrate) compare
Atu4792 +0.3 0.9 hypothetical protein compare
Atu3215 +0.3 1.3 oligopeptide ABC transporter ATPase compare
Atu1774 +0.3 1.7 ABC transporter, substrate binding protein (peptide) compare
Atu2055 +0.3 1.3 HlyD family secretion protein compare
Atu0788 +0.3 1.3 hypothetical protein compare
Atu4543 +0.3 1.0 LysR family transcriptional regulator compare
Atu0212 +0.3 1.5 hypothetical protein compare
Atu4061 +0.3 1.4 exopolysaccharide production repressor protein compare
Atu4290 +0.3 0.7 hypothetical protein compare
Atu3919 +0.3 1.5 hypothetical protein compare
Atu0702 +0.3 1.9 calcium-binding protein, regucalcin compare
Atu4486 +0.3 0.9 nitroreductase compare
Atu2655 +0.3 1.6 hypothetical protein compare
Atu8189 +0.3 1.1 hypothetical protein compare
Atu6009 +0.3 1.4 indole-3-lactate synthase compare
Atu0744 +0.3 1.1 hypothetical protein compare
Atu1994 +0.3 1.0 acyl-CoA hydrolase compare
Atu0106 +0.3 0.7 cold shock protein compare
Atu1608 +0.3 1.8 hypothetical protein compare
Atu2511 +0.3 1.8 D-alanine aminotransferase compare
Atu0199 +0.3 1.9 ABC transporter, substrate binding protein (proline/glycine/betaine) compare
Atu0883 +0.3 0.8 hypothetical protein compare
Atu1863 +0.3 1.5 permease compare
Atu3779 +0.3 2.1 lytic murein transglycosylase compare
Atu0041 +0.3 0.8 glutamine amidotransferase compare
Atu2617 +0.3 1.1 chemotaxis protein compare
Atu1483 +0.3 1.3 cytochrome b561 compare
Atu0508 +0.3 1.6 PH Adaption potassium efflux system compare
Atu1967 +0.3 1.3 hypothetical protein compare
Atu0961 +0.3 1.4 hypothetical protein compare
Atu3788 +0.3 1.6 potassium-transporting ATPase subunit C compare
Atu0878 +0.3 1.5 hypothetical protein compare
Atu1859 +0.3 1.2 glutaminase A compare
Atu2244 +0.3 2.0 tRNA/rRNA methyltransferase compare
Atu3400 +0.3 0.6 hypothetical protein compare
Atu5164 +0.3 0.5 type IV secretion protein AvhB3 compare
Atu0364 +0.3 1.5 ribokinase compare
Atu2578 +0.3 1.3 cAMP-dependent protein kinase regulatory subunit compare
Atu2116 +0.3 0.9 hypothetical protein compare
Atu5142 +0.3 0.7 hypothetical protein compare
Atu1499 +0.3 2.1 penicillin binding protein compare
Atu2472 +0.3 0.8 hypothetical protein compare
Atu1418 +0.3 1.5 methylenetetrahydrofolate reductase compare
Atu3647 +0.3 1.2 hypothetical protein compare
Atu1888 +0.3 1.9 two component sensor kinase compare
Atu1893 +0.3 1.5 hypothetical protein compare
Atu3780 +0.3 1.7 hypothetical protein compare
Atu2712 +0.3 2.0 ABC transporter, nucleotide binding/ATPase protein (thiamine) compare
Atu1747 +0.3 1.6 hypothetical protein compare
Atu4367 +0.3 1.8 LysR family transcriptional regulator compare
Atu0797 +0.3 1.5 hydrolase compare
Atu1952 +0.3 0.6 hypothetical protein compare
Atu0739 +0.3 1.1 hypothetical protein compare
Atu4326 +0.3 1.9 proline/glycine betaine transporter compare
Atu0907 +0.3 1.0 Phosphinothricin acetyltransferase compare
Atu8151 +0.3 0.8 hypothetical protein compare
Atu0207 +0.3 2.1 transcriptional regulator, LysR family compare
Atu0536 +0.3 1.5 hypothetical protein compare
Atu2144 +0.3 1.7 hypothetical protein compare
Atu3497 +0.3 0.6 hypothetical protein compare
Atu4821 +0.3 1.8 3-oxoacyl-ACP reductase compare
Atu8169 +0.3 1.4 hypothetical protein compare
Atu1920 +0.3 1.4 hypothetical protein compare
Atu2176 +0.3 1.3 hypothetical protein compare
Atu5441 +0.3 2.1 ABC transporter substrate binding protein compare
Atu3271 +0.3 1.5 glycosyltransferase compare
Atu4155 +0.3 1.4 aliphatic sulfonate ABC transporter permease compare
Atu1427 +0.3 1.1 hypothetical protein compare
Atu1400 +0.3 2.0 phosphoglycerate dehydrogenase compare
Atu1517 +0.3 1.4 hypothetical protein compare
Atu4434 +0.3 1.5 oligopeptide ABC transporter ATPase compare
Atu2677 +0.3 1.2 protein tyrosine phosphatase compare
Atu2380 +0.2 0.9 hypothetical protein compare
Atu2725 +0.2 1.3 transcriptional regulator, DeoR family compare
Atu8094 +0.2 1.1 hypothetical protein compare
Atu1121 +0.2 1.4 lignin degradation protein compare
Atu6188 +0.2 1.6 virA/G regulated protein compare
Atu4647 +0.2 1.3 hypothetical protein compare
Atu3467 +0.2 0.8 hypothetical protein compare
Atu2424 +0.2 1.6 ABC transporter, nucleotide binding/ATPase protein compare
Atu3835 +0.2 1.5 hypothetical protein compare
Atu1155 +0.2 1.6 hypothetical protein compare
Atu1682 +0.2 1.8 hypothetical protein compare
Atu2425 +0.2 1.8 ABC transporter, nucleotide binding/ATPase protein compare
Atu1908 +0.2 1.3 hypothetical protein compare
Atu4549 +0.2 1.5 beta-ketoadipyl CoA thiolase compare
Atu5535 +0.2 1.7 ABC transporter nucleotide binding/ATPase compare


Specific Phenotypes

None in this experiment

For Agrobacterium fabrum C58 in stress experiments

For stress Rosmarinic acid across organisms