Experiment set11IT072 for Agrobacterium fabrum C58

Compare to:

LB with methyl jasmonate 5 mM

200 most detrimental genes:

  gene name fitness t score description  
Atu4609 +2.3 18.7 glycosyltransferase compare
Atu4608 +2.2 19.7 hypothetical protein compare
Atu4607 +1.4 12.3 sugar acetylase compare
Atu3795 +1.3 12.0 AcrB/AcrD/AcrF family protein compare
Atu3796 +1.3 10.3 efflux protein compare
Atu3797 +1.3 9.0 HlyD family secretion protein compare
Atu2163 +1.2 2.7 hypothetical protein compare
Atu1182 +1.1 2.4 hypothetical protein compare
Atu5540 +1.0 1.8 hypothetical protein compare
Atu0026 +1.0 1.5 hypothetical protein compare
Atu2489 +0.9 7.0 hypothetical protein compare
Atu0107 +0.9 3.4 hypothetical protein compare
Atu4161 +0.9 1.8 hypothetical protein compare
Atu1525 +0.8 2.6 hypothetical protein compare
Atu4669 +0.8 5.2 hypothetical protein compare
Atu5173 +0.7 1.9 dehydrogenase compare
Atu1518 +0.7 3.6 transcriptional regulator, Fur family compare
Atu1466 +0.7 1.6 hypothetical protein compare
Atu4677 +0.7 1.5 hypothetical protein compare
Atu3634 +0.7 3.6 penicillin-binding protein dacf precursor compare
Atu0048 +0.7 5.6 hypothetical protein compare
Atu0046 +0.7 4.9 hypothetical protein compare
Atu4606 +0.7 4.7 hypothetical protein compare
Atu8039 +0.7 2.3 hypothetical protein compare
Atu1952 +0.7 1.3 hypothetical protein compare
Atu1892 +0.6 1.9 hypothetical protein compare
Atu3609 +0.6 4.0 1-acyl-sn-glycerol-3-phosphate acyltransferase compare
Atu6165 +0.6 1.5 hypothetical protein compare
Atu8134 +0.6 3.0 hypothetical protein compare
Atu0813 +0.6 4.7 hypothetical protein compare
Atu0956 +0.6 2.5 phage prohead protease compare
Atu3773 +0.6 2.1 hypothetical protein compare
Atu3295 +0.6 1.8 hypothetical protein compare
Atu8056 +0.6 1.0 hypothetical protein compare
Atu3415 +0.6 2.2 ABC transporter substrate binding protein compare
Atu1863 +0.6 2.8 permease compare
Atu8053 +0.6 2.1 hypothetical protein compare
Atu0302 +0.5 3.7 tetrapyrrole methylase family protein compare
Atu3031 +0.5 1.1 hypothetical protein compare
Atu0041 +0.5 1.4 glutamine amidotransferase compare
Atu4200 +0.5 2.0 hypothetical protein compare
Atu3794 +0.5 3.6 FadR family transcriptional regulator compare
Atu1844 +0.5 2.0 Phosphoribosylformylglycinamidine synthetase compare
Atu4613 +0.5 4.3 glycosyltransferase compare
Atu2368 +0.5 1.2 hypothetical protein compare
Atu0786 +0.5 2.1 peptidase, family M16 compare
Atu8023 +0.5 1.7 hypothetical protein compare
Atu8054 +0.5 0.8 hypothetical protein compare
Atu2549 +0.5 3.6 transcriptional regulator, TetR family compare
Atu1980 +0.5 1.5 hypothetical protein compare
Atu4187 +0.5 1.0 tRNA-Met compare
Atu2221 +0.5 3.0 Lipid A biosynthesis protein compare
Atu0536 +0.5 2.4 hypothetical protein compare
Atu1566 +0.5 0.8 hypothetical protein compare
Atu5470 +0.5 1.2 hypothetical protein compare
Atu2058 +0.5 2.2 hypothetical protein compare
Atu0413 +0.5 0.8 stress induced protein compare
Atu1098 +0.5 1.7 hypothetical protein compare
Atu0781 +0.5 2.0 hypothetical protein compare
Atu4407 +0.4 1.2 periplasmic nitrate reductase, NapD protein compare
Atu1127 +0.4 1.3 molybdopterin converting factor small subunit compare
Atu4356 +0.4 2.8 hypothetical protein compare
Atu3345 +0.4 1.6 6-pyruvoyl tetrahydrobiopterin synthase compare
Atu2442 +0.4 1.4 hypothetical protein compare
Atu5163 +0.4 1.3 type IV secretion protein AvhB2 compare
Atu3527 +0.4 2.5 hypothetical protein compare
Atu4079 +0.4 1.6 hypothetical protein compare
Atu1103 +0.4 1.8 rRNA-adenine N6,N6-dimethyltransferase compare
Atu0968 +0.4 2.8 hypothetical protein compare
Atu2484 +0.4 0.9 hypothetical protein compare
Atu1570 +0.4 0.6 hypothetical protein compare
Atu0038 +0.4 2.0 phosphoribosyl-ATP pyrophosphohydrolase compare
Atu4514 +0.4 1.5 RpiR family transcriptional regulator compare
Atu4743 +0.4 2.9 LacI family transcriptional regulator compare
Atu4117 +0.4 2.1 dipeptide ABC transporter ATPase compare
Atu8200 +0.4 1.7 hypothetical protein compare
Atu4410 +0.4 1.9 periplasmic nitrate reductase, cytochrome c-type protein compare
Atu4095 +0.4 1.6 hypothetical protein compare
Atu0594 +0.4 2.8 alpha-glucosidase compare
Atu0206 +0.4 1.3 hypothetical protein compare
Atu0163 +0.4 2.3 tonB protein compare
Atu1818 +0.4 1.2 hypothetical protein compare
Atu2200 +0.4 1.5 cold shock protein compare
Atu4469 +0.4 1.3 iron ABC transporter permease compare
Atu0703 +0.4 1.6 keto-hydroxyglutarate-aldolase/keto-deoxy- phosphogluconate aldolase compare
Atu0765 +0.4 2.4 TldD compare
Atu2130 +0.4 1.4 hypothetical protein compare
Atu0475 +0.4 3.0 hypothetical protein compare
Atu0997 +0.4 1.8 hypothetical protein compare
Atu4398 +0.4 2.3 hypothetical protein compare
Atu1799 +0.4 2.8 hypothetical protein compare
Atu0827 +0.4 2.4 hypothetical protein compare
Atu3588 +0.4 2.1 DNA-3-methyladenine glycosidase II compare
Atu1889 +0.4 1.3 diacylglycerol kinase compare
Atu2548 +0.4 3.1 phosphoribosylaminoimidazole-succinocarboxamide synthase compare
Atu4427 +0.4 1.8 replicative DNA helicase compare
Atu4486 +0.4 1.3 nitroreductase compare
Atu4779 +0.4 1.5 hypothetical protein compare
Atu4458 +0.4 1.7 hypothetical protein compare
Atu0346 +0.4 1.0 uridylyltransferase/uridylyl-removing enzyme UTase compare
Atu0681 +0.4 1.6 hypothetical protein compare
Atu0043 +0.4 1.2 imidazoleglycerol-phosphate dehydratase compare
Atu1325 +0.4 1.0 acetyltransferase compare
Atu3126 +0.4 1.5 hypothetical protein compare
Atu1164 +0.4 2.8 hypothetical protein compare
Atu0807 +0.4 1.9 metallo-beta-lactamase superfamily protein compare
Atu0892 +0.4 2.2 hypothetical protein compare
Atu8025 +0.4 0.9 hypothetical protein compare
Atu4724 +0.4 1.1 hypothetical protein compare
Atu0883 +0.4 1.2 hypothetical protein compare
Atu4737 +0.4 1.3 hypothetical protein compare
Atu2235 +0.4 1.2 hypothetical protein compare
Atu3578 +0.4 2.2 glycerol-3-phosphate dehydrogenase compare
Atu1387 +0.4 1.2 transcriptional regulator, GntR family compare
Atu0156 +0.4 1.7 hypothetical protein compare
Atu4615 +0.4 2.4 glucose-1-phosphate thymidylyltransferase compare
Atu4614 +0.4 2.5 glycosyltransferase compare
Atu2437 +0.4 1.2 hypothetical protein compare
Atu0595 +0.3 2.6 ABC transporter, nucleotide binding/ATPase protein compare
Atu8155 +0.3 1.8 hypothetical protein compare
Atu0230 +0.3 1.0 hypothetical protein compare
Atu2794 +0.3 1.8 uroporphyrin-III C-methyltransferase compare
Atu0803 +0.3 3.0 pyruvate,orthophosphate dikinase compare
Atu1725 +0.3 1.2 hypothetical protein compare
Atu0504 +0.3 2.0 hypothetical protein compare
Atu4019 +0.3 2.4 two component response regulator compare
Atu3523 +0.3 1.9 polysaccharide biosynthesis-like protein compare
Atu0953 +0.3 0.6 hypothetical protein compare
Atu1724 +0.3 2.2 hypothetical protein compare
Atu6112 +0.3 1.9 conserved hypothetical protein compare
Atu3957 +0.3 2.2 glycine-betaine ABC transporter substrate-binding protein compare
Atu2236 +0.3 1.4 adenine phosphoribosyltransferase compare
Atu6098 +0.3 0.5 transcriptional regulator, HTH family compare
Atu0085 +0.3 1.1 tRNA pseudouridine 55 synthase compare
Atu0137 +0.3 1.7 phosphopentomutase compare
Atu1971 +0.3 1.6 hypothetical protein compare
Atu2578 +0.3 1.7 cAMP-dependent protein kinase regulatory subunit compare
Atu1893 +0.3 1.8 hypothetical protein compare
Atu3541 +0.3 1.8 hypothetical protein compare
Atu8189 +0.3 1.7 hypothetical protein compare
Atu8188 +0.3 2.1 hypothetical protein compare
Atu3613 +0.3 1.9 hypothetical protein compare
Atu2044 +0.3 1.3 HFLC protein compare
Atu1830 +0.3 1.3 bacterioferritin comigratory protein compare
Atu0182 +0.3 1.5 transcriptional regulator, GntR family compare
Atu4349 +0.3 1.5 hypothetical protein compare
Atu5156 +0.3 2.3 short chain dehydrogenase dehydrogenases compare
Atu1355 +0.3 1.3 hypothetical protein compare
Atu2055 +0.3 1.5 HlyD family secretion protein compare
Atu2193 +0.3 0.5 hypothetical protein compare
Atu3767 +0.3 1.5 diguanylate cyclase compare
Atu3120 +0.3 0.6 hypothetical protein compare
Atu0751 +0.3 1.1 ABC transporter, nucleotide binding/ATPase protein (cobalt) compare
Atu1018 +0.3 1.6 hypothetical protein compare
Atu2675 +0.3 1.0 hypothetical protein compare
Atu3619 +0.3 1.0 hypothetical protein compare
Atu5473 +0.3 1.8 D-alanine aminotransferase compare
Atu8010 +0.3 1.3 hypothetical protein compare
Atu4075 +0.3 1.3 glycogen synthase compare
Atu4854 +0.3 1.5 hypothetical protein compare
Atu4454 +0.3 1.3 RpiR family transcriptional regulator compare
Atu4166 +0.3 1.0 UDP-glucose 4-epimerase compare
Atu1221 +0.3 2.0 hypothetical protein compare
Atu4018 +0.3 2.0 two component sensor kinase compare
Atu5513 +0.3 0.9 cold shock protein compare
Atu4897 +0.3 0.3 hypothetical protein compare
Atu4543 +0.3 1.3 LysR family transcriptional regulator compare
Atu1637 +0.3 1.1 hypothetical protein compare
Atu8168 +0.3 0.7 hypothetical protein compare
Atu4630 +0.3 0.8 hypothetical protein compare
Atu1260 +0.3 0.7 hypothetical protein compare
Atu1872 +0.3 1.3 hypothetical protein compare
Atu0348 +0.3 1.9 hypothetical protein compare
Atu3506 +0.3 1.1 hypothetical protein compare
Atu4093 +0.3 0.7 hypothetical protein compare
Atu0593 +0.3 2.3 ABC transporter, membrane spanning protein compare
Atu3791 +0.3 2.2 L-asparaginase compare
Atu4682 +0.3 2.0 D-amino acid dehydrogenase small subunit compare
Atu2063 +0.3 1.0 hypothetical protein compare
Atu0290 +0.3 1.4 rare lipoprotein A compare
Atu1531 +0.3 1.9 hypothetical protein compare
Atu1884 +0.3 1.1 ABC transporter, substrate binding protein (aliphatic sulfonate) compare
Atu5147 +0.3 1.9 Mg(2+) transport ATPase compare
Atu1782 +0.3 1.3 hypothetical protein compare
Atu8020 +0.3 1.0 hypothetical protein compare
Atu0637 +0.3 2.2 proteinase sohB compare
Atu1882 +0.3 1.2 usg protein compare
Atu3475 +0.3 1.5 acetyl-CoA C-acetyltransferase compare
Atu5097 +0.3 1.7 ATP-dependent DNA ligase compare
Atu1255 +0.3 1.8 oxidoreductase compare
Atu1349 +0.3 1.6 hypothetical protein compare
Atu3201 +0.3 2.0 TetR family transcriptional regulator compare
Atu2244 +0.3 1.9 tRNA/rRNA methyltransferase compare
Atu4238 +0.3 1.1 hydrolase compare
Atu3218 +0.3 1.2 hypothetical protein compare
Atu3501 +0.3 1.5 ABC transporter permease compare
Atu1837 +0.3 1.8 transcriptional regulator compare
Atu0242 +0.3 1.7 carbon-nitrogen hydrolase compare
Atu2209 +0.3 1.1 pyrroline-5-carboxylate reductase compare
Atu5421 +0.3 1.7 ABC transporter membrane spanning protein (putrescine) compare


Specific Phenotypes

For 25 genes in this experiment

For stress methyl jasmonate in Agrobacterium fabrum C58

For stress methyl jasmonate across organisms