Experiment set11IT068 for Agrobacterium fabrum C58

Compare to:

LB with D(+)-Carvone 5 mM

200 most important genes:

  gene name fitness t score description  
Atu4610 -5.7 -12.3 sugar nucleotide epimerase/dehydratase compare
Atu0978 -5.3 -10.7 two component response regulator compare
Atu0769 -4.1 -2.8 protoheme IX farnesyltransferase compare
Atu4055 -3.9 -7.5 endo-1,3-1,4-beta-glycanase compare
Atu1030 -3.6 -3.5 GTP pyrophosphohydrolase/synthetase, RelA/SpoT family compare
Atu2590 -3.6 -14.0 hypothetical protein compare
Atu0979 -3.6 -11.3 two component sensor kinase compare
Atu3763 -3.5 -2.4 hypothetical protein compare
Atu3469 -3.4 -4.5 phosphoglyceromutase compare
Atu2584 -3.3 -8.0 hypothetical protein compare
Atu2585 -3.2 -8.5 hypothetical protein compare
Atu2583 -3.1 -13.6 glycosyltransferase compare
Atu4317 -3.1 -4.6 TetR family transcriptional regulator compare
Atu0030 -3.1 -3.2 phosphocarrier protein HPr compare
Atu2577 -3.1 -20.4 ABC transporter, nucleotide binding/ATPase protein compare
Atu4148 -3.0 -8.1 UDP-glucuronic acid epimerase compare
Atu0784 -3.0 -5.5 hypothetical protein compare
Atu2582 -2.9 -11.1 UDP-glucose/GDP-mannose dehydrogenase compare
Atu2207 -2.9 -3.1 two component sensor kinase compare
Atu4149 -2.9 -11.6 UDP-glucose 6-dehydrogenase compare
Atu2591 -2.8 -10.7 glucosyltransferase compare
Atu0331 -2.8 -5.0 sigma-54 modulation protein compare
Atu8095 -2.8 -11.0 hypothetical protein compare
Atu2592 -2.7 -8.8 hypothetical protein compare
Atu1484 -2.7 -6.6 transcriptional regulator compare
Atu4217 -2.5 -2.9 TetR family transcriptional regulator compare
Atu0912 -2.5 -2.7 Na+/H+ antiporter compare
Atu0533 -2.3 -4.7 putative inhibitor of septum formation compare
Atu3779 -2.3 -12.8 lytic murein transglycosylase compare
Atu1644 -2.3 -4.1 hypothetical protein compare
Atu1446 -2.2 -3.6 two component response regulator compare
Atu0355 -2.1 -11.0 1-acyl-sn-glycerol-3-phosphate acyltransferase compare
Atu1647 -2.1 -9.6 ABC transporter, membrane spanning protein compare
Atu3613 -2.1 -8.7 hypothetical protein compare
Atu1645 -2.1 -8.2 ABC transporter, substrate binding protein compare
Atu0031 -2.0 -2.4 PTS system, IIA component compare
Atu1739 -2.0 -5.5 permease compare
Atu2439 -1.9 -2.4 hypothetical protein compare
Atu2304 -1.9 -11.5 bacteroid development protein compare
Atu2684 -1.9 -3.0 hypothetical protein compare
Atu1646 -1.9 -6.3 ABC transporter, nucleotide binding/ATPase protein compare
Atu1327 -1.7 -4.8 NADH-ubiquinone oxidoreductase compare
Atu0977 -1.6 -4.3 serine protease DO-like protease compare
Atu1359 -1.6 -1.5 dnaK deletion suppressor protein compare
Atu3798 -1.5 -7.1 TetR family transcriptional regulator compare
Atu4072 -1.5 -1.9 nodulation protein N compare
Atu1545 -1.5 -7.8 hypothetical protein compare
Atu0926 -1.4 -5.2 hypothetical protein compare
Atu1621 -1.4 -8.0 hypothetical protein compare
Atu0931 -1.4 -9.3 penicillin binding protein compare
Atu0479 -1.4 -6.7 ABC transporter, substrate binding protein (amino acid) compare
Atu0188 -1.3 -3.9 ABC transporter, membrane spanning protein (peptide) compare
Atu3598 -1.3 -2.6 thiol:disulfide interchange protein compare
Atu3608 -1.3 -3.9 hypothetical protein compare
Atu0184 -1.3 -3.5 glucokinase compare
Atu0142 -1.3 -2.7 cytochrome o ubiquinol oxidase subunit II compare
Atu3886 -1.3 -7.0 lysophospholipase compare
Atu2184 -1.3 -3.5 transcriptional regulator, AsnC family compare
Atu0923 -1.3 -3.2 hypothetical protein compare
Atu3353 -1.2 -7.8 mannose-1-phosphate guanylyltransferase compare
Atu0687 -1.2 -2.1 hypothetical protein compare
Atu3203 -1.2 -5.3 RND multidrug efflux membrane permease compare
Atu0051 -1.2 -5.6 two component sensor kinase compare
Atu8167 -1.2 -8.1 putative transmembrane protein compare
Atu1333 -1.2 -3.3 outer membrane protein compare
Atu0361 -1.2 -2.1 transcriptional regulator compare
Atu3780 -1.1 -4.7 hypothetical protein compare
Atu2824 -1.1 -4.3 hypothetical protein compare
Atu3012 -1.1 -1.9 hypothetical protein compare
Atu3697 -1.1 -3.6 ATP-dependent protease LA 2 compare
Atu1131 -1.1 -6.9 outer membrane protein compare
Atu1028 -1.1 -2.6 hypothetical protein compare
Atu0925 -1.1 -1.9 hypothetical protein compare
Atu0141 -1.1 -1.7 cytochrome O ubiquinol oxidase subunit I compare
Atu1056 -1.1 -4.8 hypothetical protein compare
Atu4077 -1.1 -7.1 glycogen branching protein compare
Atu0190 -1.1 -5.6 ABC transporter, nucleotide binding/ATPase protein (peptide) compare
Atu5160 -1.1 -2.6 transcriptional regulator protein compare
Atu3311 -1.1 -7.1 phosphomannose isomerase compare
Atu1373 -1.1 -5.9 hypothetical protein compare
Atu1439 -1.0 -2.1 hypothetical protein compare
Atu3202 -1.0 -8.2 RND multidrug efflux transporter compare
Atu0233 -1.0 -7.5 lysozyme compare
Atu2183 -1.0 -6.4 lipopolysaccharide core biosynthesis mannosyltransferase compare
Atu3008 -1.0 -1.0 hypothetical protein compare
Atu0780 -1.0 -6.1 hypothetical protein compare
Atu1163 -1.0 -2.2 exopolysaccharide II synthesis transcriptional activator ExpG compare
Atu0050 -0.9 -4.6 two component response regulator compare
Atu1810 -0.9 -1.6 hypothetical protein compare
Atu8159 -0.9 -2.7 hypothetical protein compare
Atu2433 -0.9 -1.4 hypothetical protein compare
Atu2614 -0.9 -4.5 hypothetical protein compare
Atu3248 -0.9 -4.8 cell division inhibitor compare
Atu4527 -0.9 -1.7 hypothetical protein compare
Atu1449 -0.9 -3.9 potassium uptake protein compare
Atu0017 -0.9 -2.9 N-(5-phosphoribosyl) anthranilate isomerase compare
Atu1339 -0.9 -2.6 ribonuclease E compare
Atu1685 -0.9 -1.2 hypothetical protein compare
Atu1774 -0.9 -5.4 ABC transporter, substrate binding protein (peptide) compare
Atu1803 -0.9 -4.3 cold shock protein compare
Atu1076 -0.9 -2.2 colicin V production protein compare
Atu1177 -0.9 -4.0 hypothetical protein compare
Atu2017 -0.8 -0.7 hypothetical protein compare
Atu4171 -0.8 -5.0 cold-shock dead-box protein A compare
Atu1099 -0.8 -3.9 hypothetical protein compare
Atu1160 -0.8 -3.1 hypothetical protein compare
Atu2125 -0.8 -1.6 ABC transporter, nucleotide binding/ATPase protein compare
Atu0344 -0.8 -3.4 hypothetical protein compare
Atu1804 -0.8 -4.7 hypothetical protein compare
Atu0388 -0.8 -5.6 two component sensor kinase compare
Atu0768 -0.8 -5.5 cytochrome-c oxidase chain I compare
Atu1499 -0.8 -5.2 penicillin binding protein compare
Atu3623 -0.8 -2.6 DnaJ family molecular chaperone compare
Atu1204 -0.8 -3.7 potassium uptake protein compare
Atu1251 -0.8 -4.5 O-acetylhomoserine sulfhydrylase compare
Atu0759 -0.8 -4.7 hypothetical protein compare
Atu3249 -0.8 -3.8 septum formation inhibitor compare
Atu2722 -0.8 -4.1 porin compare
Atu0189 -0.8 -2.6 ABC transporter, membrane spanning protein (peptide) compare
Atu2379 -0.8 -4.4 phosphomannomutase compare
Atu3336 -0.7 -2.7 hypothetical protein compare
Atu0353 -0.7 -4.3 acetyltransferase compare
Atu0486 -0.7 -3.7 dihydroorotate dehydrogenase compare
Atu0895 -0.7 -2.3 ABC transporter, substrate binding protein compare
Atu4214 -0.7 -2.3 cold shock protein compare
Atu3698 -0.7 -3.4 thioredoxin compare
Atu1225 -0.7 -1.6 hypothetical protein compare
Atu0153 -0.7 -2.7 transcriptional regulator, Fur family compare
Atu2117 -0.7 -4.3 lytic murein transglycosylase compare
Atu1364 -0.7 -3.2 ATP-dependent Clp protease, ATP-binding subunit compare
Atu3343 -0.7 -4.0 trehalose utilization-like protein compare
Atu1286 -0.7 -1.9 hypothetical protein compare
Atu2073 -0.7 -2.3 membrane protein compare
Atu0036 -0.7 -2.6 hypothetical protein compare
Atu6036 -0.7 -1.1 entry-exclusion protein compare
Atu2801 -0.7 -3.0 precorrin-2 C20 methyltransferase compare
Atu4050 -0.7 -2.7 UTP-glucose-1-phosphate uridylyltransferase compare
Atu3341 -0.7 -3.8 trehalose/maltose ABC transporter ATPase compare
Atu0788 -0.7 -2.8 hypothetical protein compare
Atu3342 -0.7 -3.4 trehalose utilization-like protein compare
Atu0971 -0.7 -2.5 two component sensor kinase compare
Atu5125 -0.7 -3.6 GntR family transcriptional regulator compare
Atu4896 -0.7 -1.1 acetyltransferase compare
Atu2249 -0.7 -0.9 hypothetical protein compare
Atu8032 -0.6 -1.3 hypothetical protein compare
Atu2753 -0.6 -3.8 ATP-dependent helicase compare
Atu1470 -0.6 -0.5 Camphor resistance protein compare
Atu3910 -0.6 -2.3 LamB/YcsF family protein compare
Atu2790 -0.6 -1.3 3-isopropylmalate dehydratase, small subunit compare
Atu2762 -0.6 -2.7 hypothetical protein compare
Atu2237 -0.6 -3.0 cytochrome c1 compare
Atu1445 -0.6 -3.0 two component sensor kinase compare
Atu4075 -0.6 -2.7 glycogen synthase compare
Atu2710 -0.6 -3.4 hypothetical protein compare
Atu0941 -0.6 -0.8 hypothetical protein compare
Atu1062 -0.6 -1.3 phosphatidylserine synthase compare
Atu1619 -0.6 -1.9 protein-export membrane protein SECG compare
Atu1971 -0.6 -1.8 hypothetical protein compare
Atu4345 -0.6 -1.9 hypothetical protein compare
Atu2464 -0.6 -1.3 formyltetrahydrofolate deformylase compare
Atu2052 -0.6 -3.1 hypothetical protein compare
Atu1001 -0.6 -2.6 hypothetical protein compare
Atu1044 -0.6 -4.4 hypothetical protein compare
Atu1009 -0.6 -1.7 hypothetical protein compare
Atu0386 -0.6 -1.4 hypothetical protein compare
Atu1679 -0.6 -1.7 peptidyl prolyl cis-trans isomerase compare
Atu5430 -0.6 -1.0 hypothetical protein compare
Atu0503 -0.6 -4.7 enoyl-CoA hydratase compare
Atu3746 -0.6 -3.1 hypothetical protein compare
Atu4446 -0.6 -3.4 hypothetical protein compare
Atu0399 -0.6 -2.3 dihydroorotase compare
Atu2770 -0.6 -2.5 acetoacetyl CoA reductase; poly-beta-hydroxybutyrate biosynthesis compare
Atu3339 -0.6 -2.9 trehalose/maltose ABC transporter permease compare
Atu1500 -0.6 -2.2 rare lipoprotein A compare
Atu0806 -0.5 -4.2 hypothetical protein compare
Atu4888 -0.5 -2.1 hypothetical protein compare
Atu3603 -0.5 -1.6 two component response regulator compare
Atu0044 -0.5 -3.5 heat shock protein hslV compare
Atu0354 -0.5 -1.2 ferric uptake regulator compare
Atu3747 -0.5 -3.4 hypothetical protein compare
Atu1513 -0.5 -2.7 ABC excinuclease subunit A compare
Atu2200 -0.5 -1.0 cold shock protein compare
Atu8054 -0.5 -0.7 hypothetical protein compare
Atu4159 -0.5 -2.1 AsnC family transcriptional regulator compare
Atu3757 -0.5 -1.9 hypothetical protein compare
Atu1380 -0.5 -3.4 zinc metallopeptidase compare
Atu1592 -0.5 -1.8 hypothetical protein compare
Atu2267 -0.5 -2.0 hypothetical protein compare
Atu0225 -0.5 -0.7 hypothetical protein compare
Atu3963 -0.5 -2.9 GntR family transcriptional regulator compare
Atu8056 -0.5 -0.7 hypothetical protein compare
Atu0771 -0.5 -2.7 cytochrome c oxidase subunit III compare
Atu0257 -0.5 -3.7 hypothetical protein compare
Atu1686 -0.5 -4.1 peptidyl-prolyl cis-trans isomerse D compare
Atu0106 -0.5 -1.7 cold shock protein compare
Atu0755 -0.5 -1.6 hypothetical protein compare
Atu1705 -0.5 -1.6 SEC-independent protein translocase protein compare
Atu0640 -0.5 -1.1 hypothetical protein compare
Atu2169 -0.5 -2.4 hypothetical protein compare
Atu0124 -0.5 -1.2 hypothetical protein compare


Specific Phenotypes

For 10 genes in this experiment

For stress D(+)-Carvone in Agrobacterium fabrum C58

For stress D(+)-Carvone across organisms