Experiment set11IT064 for Agrobacterium fabrum C58

Compare to:

LB with Vanillin 1.25 mM

200 most detrimental genes:

  gene name fitness t score description  
Atu3773 +0.8 3.6 hypothetical protein compare
Atu3759 +0.8 2.0 hypothetical protein compare
Atu2201 +0.8 3.1 hydrolase compare
Atu1182 +0.7 2.0 hypothetical protein compare
Atu4677 +0.7 1.4 hypothetical protein compare
Atu8087 +0.7 0.6 putative peptidoglycan binding protein compare
Atu0354 +0.6 2.0 ferric uptake regulator compare
Atu2017 +0.6 1.3 hypothetical protein compare
Atu4144 +0.6 1.3 hypothetical protein compare
Atu1098 +0.6 1.7 hypothetical protein compare
Atu0152 +0.6 0.9 hypothetical protein compare
Atu1629 +0.6 1.4 transcriptional regulator, ArsR family compare
Atu8056 +0.6 1.1 hypothetical protein compare
Atu3775 +0.6 1.9 hypothetical protein compare
Atu0562 +0.6 2.2 flagellar motor switch protein FliN compare
Atu5540 +0.5 0.9 hypothetical protein compare
Atu2235 +0.5 1.5 hypothetical protein compare
Atu2163 +0.5 1.1 hypothetical protein compare
Atu0677 +0.5 1.4 hypothetical protein compare
Atu2484 +0.5 1.4 hypothetical protein compare
Atu4407 +0.5 1.7 periplasmic nitrate reductase, NapD protein compare
Atu8151 +0.5 1.6 hypothetical protein compare
Atu0883 +0.5 1.6 hypothetical protein compare
Atu2113 +0.5 1.6 N-acetylmuramoyl-L-alanine amidase compare
Atu0986 +0.5 1.1 hypothetical protein compare
Atu8191 +0.5 1.4 hypothetical protein compare
Atu2200 +0.5 1.9 cold shock protein compare
Atu1892 +0.5 1.2 hypothetical protein compare
Atu0237 +0.4 2.0 hypothetical protein compare
Atu1124 +0.4 1.7 hypothetical protein compare
Atu8200 +0.4 2.2 hypothetical protein compare
Atu8054 +0.4 0.8 hypothetical protein compare
Atu0671 +0.4 1.8 hypothetical protein compare
Atu1086 +0.4 3.4 MFS permease compare
Atu3150 +0.4 2.0 sugar ABC transporter permease compare
Atu1896 +0.4 1.6 hypothetical protein compare
Atu1264 +0.4 1.8 hypothetical protein compare
Atu1754 +0.4 1.0 hypothetical protein compare
Atu1865 +0.4 1.5 hypothetical protein compare
Atu1087 +0.4 3.2 secretion protein compare
Atu0043 +0.4 1.4 imidazoleglycerol-phosphate dehydratase compare
Atu1031 +0.4 1.6 hypothetical protein compare
Atu0471 +0.4 1.8 hypothetical protein compare
Atu1427 +0.4 1.6 hypothetical protein compare
Atu1175 +0.4 1.1 hypothetical protein compare
Atu2683 +0.4 1.1 hypothetical protein compare
Atu2234 +0.4 1.4 hypothetical protein compare
Atu3647 +0.4 1.8 hypothetical protein compare
Atu2789 +0.4 1.9 hypothetical protein compare
Atu8053 +0.4 1.7 hypothetical protein compare
Atu2550 +0.4 3.3 RND multidrug efflux membrane permease compare
Atu1994 +0.4 1.6 acyl-CoA hydrolase compare
Atu1625 +0.4 2.4 methyltransferase compare
Atu0723 +0.4 0.9 FAD dependent oxidoreductase compare
Atu1190 +0.4 1.6 hypothetical protein compare
Atu1864 +0.4 2.2 putative homoserine/homoserine lactone efflux protein compare
Atu1260 +0.4 0.9 hypothetical protein compare
Atu1725 +0.4 1.6 hypothetical protein compare
Atu6160 +0.4 1.8 conserved hypothetical protein compare
Atu0419 +0.4 1.1 two component sensor kinase compare
Atu3604 +0.4 0.7 hypoxanthine phosphoribosyltransferase compare
Atu0792 +0.4 2.2 hypothetical protein compare
Atu3492 +0.4 1.5 sugar kinase compare
Atu2489 +0.4 2.6 hypothetical protein compare
Atu1127 +0.4 1.4 molybdopterin converting factor small subunit compare
Atu4779 +0.3 1.5 hypothetical protein compare
Atu0690 +0.3 0.7 hypothetical protein compare
Atu8036 +0.3 1.4 protein YBGT-like protein compare
Atu1062 +0.3 1.1 phosphatidylserine synthase compare
Atu2104 +0.3 1.1 hypothetical protein compare
Atu1637 +0.3 1.5 hypothetical protein compare
Atu1213 +0.3 1.0 hypothetical protein compare
Atu1871 +0.3 1.8 glutathione S-transferase compare
Atu0540 +0.3 1.4 hypothetical protein compare
Atu2424 +0.3 2.1 ABC transporter, nucleotide binding/ATPase protein compare
Atu0953 +0.3 0.7 hypothetical protein compare
Atu4108 +0.3 2.2 ribonuclease D compare
Atu1072 +0.3 1.8 hypothetical protein compare
Atu2040 +0.3 1.9 phosphoserine phosphatase compare
Atu1085 +0.3 2.0 transcriptional regulator, MarR family compare
Atu2531 +0.3 2.2 actinorhodin polyketide dimerase compare
Atu1863 +0.3 2.0 permease compare
Atu2166 +0.3 1.5 hypothetical protein compare
Atu3510 +0.3 1.0 amidohydrolase compare
Atu3645 +0.3 2.1 hypothetical protein compare
Atu1007 +0.3 1.2 hypothetical protein compare
Atu5130 +0.3 1.6 attachment protein compare
Atu4466 +0.3 2.0 oxidoreductase compare
Atu8162 +0.3 0.5 hypothetical protein compare
Atu2391 +0.3 1.5 ABC transporter, substrate binding protein (nitrate/sulfonate/taurine/bicarbonate) compare
Atu4003 +0.3 2.0 hypothetical protein compare
Atu3656 +0.3 2.2 acetyltransferase compare
Atu4437 +0.3 1.4 LysR family transcriptional regulator compare
Atu0703 +0.3 1.1 keto-hydroxyglutarate-aldolase/keto-deoxy- phosphogluconate aldolase compare
Atu2771 +0.3 1.9 bacterioferritin compare
Atu0240 +0.3 1.5 hypothetical protein compare
Atu2236 +0.3 1.2 adenine phosphoribosyltransferase compare
Atu4324 +0.3 2.3 ribitol kinase compare
Atu3523 +0.3 2.0 polysaccharide biosynthesis-like protein compare
Atu2122 +0.3 2.2 lytic murein transglycosylase compare
Atu3532 +0.3 2.0 GntR family transcriptional regulator compare
Atu5517 +0.3 1.4 hypothetical protein compare
Atu2335 +0.3 1.0 hypothetical protein compare
Atu0662 +0.3 1.3 transcriptional regulator, GntR family compare
Atu0749 +0.3 1.0 biotin synthesis BioY protein compare
Atu1970 +0.3 1.0 hypothetical protein compare
Atu1472 +0.3 1.8 hydrolase compare
Atu2555 +0.3 0.7 L-lysine 2,3-aminomutase compare
Atu0681 +0.3 1.3 hypothetical protein compare
Atu0785 +0.3 0.9 ribosomal-protein (S5)-alanine N-acetyltransferase compare
Atu1889 +0.3 1.2 diacylglycerol kinase compare
Atu4553 +0.3 1.9 myo-inositol catabolism protein compare
Atu1516 +0.3 1.6 hypothetical protein compare
Atu1240 +0.3 2.1 hypothetical protein compare
Atu1351 +0.3 1.7 hypothetical protein compare
Atu0469 +0.3 2.2 hypothetical protein compare
Atu2081 +0.3 1.9 aminoglycoside phosphotransferase compare
Atu1971 +0.3 1.1 hypothetical protein compare
Atu0751 +0.3 1.5 ABC transporter, nucleotide binding/ATPase protein (cobalt) compare
Atu8176 +0.3 0.9 hypothetical protein compare
Atu1701 +0.3 1.0 protein-L-isoaspartate O-methyltransferase compare
Atu8189 +0.3 1.6 hypothetical protein compare
Atu5166 +0.3 1.6 type IV secretion protein AvhB5 compare
Atu2021 +0.3 1.1 transcriptional regulator, AraC family compare
Atu2325 +0.3 1.3 hypothetical protein compare
Atu4215 +0.3 1.5 cell division protein compare
Atu3415 +0.3 1.7 ABC transporter substrate binding protein compare
Atu3189 +0.3 1.6 hypothetical protein compare
Atu3313 +0.3 1.2 hypothetical protein compare
Atu0698 +0.3 1.6 hypothetical protein compare
Atu3892 +0.3 1.3 hypothetical protein compare
Atu2551 +0.3 2.1 RND multidrug efflux transporter compare
Atu4753 +0.3 1.5 amino acid ABC transporter permease compare
Atu2457 +0.3 1.1 hypothetical protein compare
Atu2117 +0.3 1.4 lytic murein transglycosylase compare
Atu3346 +0.3 1.4 succinoglycan biosynthesis regulator compare
Atu0225 +0.3 0.5 hypothetical protein compare
Atu3290 +0.3 1.8 phosphomethylpyrimidine kinase compare
Atu2035 +0.3 1.7 acetolactate synthase, small subunit compare
Atu4837 +0.3 1.5 hypothetical protein compare
Atu4151 +0.3 1.4 LysR family transcriptional regulator compare
Atu1642 +0.3 0.9 hypothetical protein compare
Atu1070 +0.3 1.2 hypothetical protein compare
Atu0627 +0.3 1.5 carboxymethylenebutenolidase compare
Atu1293 +0.3 1.6 hypothetical protein compare
Atu3569 +0.3 1.5 hypothetical protein compare
Atu3288 +0.3 1.3 hydroxyethylthiazole kinase compare
Atu4559 +0.3 1.9 sugar ABC transporter ATPase compare
Atu1682 +0.3 1.6 hypothetical protein compare
Atu4609 +0.3 1.6 glycosyltransferase compare
Atu3149 +0.3 1.4 sugar ABC transporter permease compare
Atu0337 +0.3 2.0 proteinase IV compare
Atu8041 +0.3 0.8 hypothetical protein compare
Atu3461 +0.3 0.8 GntR family transcriptional regulator compare
Atu0530 +0.3 1.6 UDP-galactose 4-epimerase compare
Atu2479 +0.3 1.3 tRNA-Gly compare
Atu0427 +0.2 1.3 hypothetical protein compare
Atu4583 +0.2 1.6 superoxide dismutase compare
Atu4362 +0.2 1.1 hypothetical protein compare
Atu1154 +0.2 1.0 hypothetical protein compare
Atu0865 +0.2 1.8 transcriptional regulator, AraC family compare
Atu0948 +0.2 1.2 hypothetical protein compare
Atu4383 +0.2 1.5 hypothetical protein compare
Atu1834 +0.2 1.6 mutT like protein compare
Atu1336 +0.2 1.2 hypothetical protein compare
Atu3679 +0.2 1.7 siderophore biosynthesis protein compare
Atu8188 +0.2 1.9 hypothetical protein compare
Atu0872 +0.2 2.1 methyl-accepting chemotaxis protein compare
Atu3049 +0.2 1.7 oligopeptide ABC transporter substrate-binding protein compare
Atu4277 +0.2 1.6 LamB/YcsF family protein compare
Atu0386 +0.2 0.8 hypothetical protein compare
Atu4832 +0.2 1.8 hypothetical protein compare
Atu4705 +0.2 1.3 LysR family transcriptional regulator compare
Atu0163 +0.2 1.3 tonB protein compare
Atu1001 +0.2 1.3 hypothetical protein compare
Atu4265 +0.2 1.3 hypothetical protein compare
Atu3079 +0.2 1.9 chromate transport protein compare
Atu3654 +0.2 1.8 hypothetical protein compare
Atu0467 +0.2 1.3 hypothetical protein compare
Atu4611 +0.2 1.4 transposase compare
Atu1851 +0.2 0.9 BolA/YrbA family protein compare
Atu4671 +0.2 1.1 response regulator compare
Atu2192 +0.2 0.6 hypothetical protein compare
Atu1830 +0.2 0.8 bacterioferritin comigratory protein compare
Atu2187 +0.2 1.1 transcriptional regulator, ArsR family compare
Atu4238 +0.2 1.1 hydrolase compare
Atu2662 +0.2 0.6 acetyltransferase compare
Atu0182 +0.2 1.2 transcriptional regulator, GntR family compare
Atu3527 +0.2 1.1 hypothetical protein compare
Atu1782 +0.2 1.3 hypothetical protein compare
Atu5170 +0.2 1.1 type IV secretion protein AvhB9 compare
Atu1323 +0.2 0.9 hypothetical protein compare
Atu0636 +0.2 1.2 hypothetical protein compare
Atu1967 +0.2 1.7 hypothetical protein compare
Atu4198 +0.2 1.1 hypothetical protein compare
Atu2404 +0.2 1.5 hypothetical protein compare
Atu0212 +0.2 1.3 hypothetical protein compare
Atu4162 +0.2 1.7 two-component response regulator compare
Atu4331 +0.2 1.7 serine/threonine phosphoprotein phosphatase compare
Atu3347 +0.2 1.5 hypothetical protein compare


Specific Phenotypes

None in this experiment

For Agrobacterium fabrum C58 in stress experiments

For stress Vanillin across organisms