Experiment set11IT062 for Agrobacterium fabrum C58

Compare to:

LB with Linalool 5 mM

200 most important genes:

  gene name fitness t score description  
Atu3469 -2.9 -5.1 phosphoglyceromutase compare
Atu2125 -2.6 -3.5 ABC transporter, nucleotide binding/ATPase protein compare
Atu4217 -2.3 -2.1 TetR family transcriptional regulator compare
Atu2684 -2.2 -3.5 hypothetical protein compare
Atu2207 -2.1 -3.8 two component sensor kinase compare
Atu3730 -2.0 -2.5 hypothetical protein compare
Atu0769 -1.9 -1.8 protoheme IX farnesyltransferase compare
Atu0977 -1.8 -5.3 serine protease DO-like protease compare
Atu2584 -1.6 -7.1 hypothetical protein compare
Atu2662 -1.6 -2.2 acetyltransferase compare
Atu0030 -1.6 -2.7 phosphocarrier protein HPr compare
Atu0912 -1.5 -2.1 Na+/H+ antiporter compare
Atu4148 -1.4 -5.7 UDP-glucuronic acid epimerase compare
Atu0400 -1.4 -4.0 orotate phosphoribosyltransferase compare
Atu2583 -1.4 -10.2 glycosyltransferase compare
Atu1359 -1.4 -1.6 dnaK deletion suppressor protein compare
Atu2439 -1.4 -1.9 hypothetical protein compare
Atu0399 -1.3 -5.5 dihydroorotase compare
Atu0298 -1.3 -6.4 orotidine 5 compare
Atu4317 -1.3 -3.0 TetR family transcriptional regulator compare
Atu2591 -1.3 -6.3 glucosyltransferase compare
Atu0025 -1.3 -2.2 hypothetical protein compare
Atu0141 -1.3 -2.0 cytochrome O ubiquinol oxidase subunit I compare
Atu0050 -1.3 -5.5 two component response regulator compare
Atu0184 -1.3 -3.5 glucokinase compare
Atu0876 -1.3 -2.5 superoxide dismutase compare
Atu2577 -1.3 -10.2 ABC transporter, nucleotide binding/ATPase protein compare
Atu1810 -1.3 -1.7 hypothetical protein compare
Atu0784 -1.3 -4.2 hypothetical protein compare
Atu1308 -1.3 -5.1 aspartate carbamoyl transferase catalytic subunit compare
Atu1327 -1.2 -4.5 NADH-ubiquinone oxidoreductase compare
Atu2592 -1.2 -6.2 hypothetical protein compare
Atu2582 -1.2 -6.8 UDP-glucose/GDP-mannose dehydrogenase compare
Atu0533 -1.2 -2.0 putative inhibitor of septum formation compare
Atu2590 -1.2 -6.3 hypothetical protein compare
Atu0142 -1.2 -2.9 cytochrome o ubiquinol oxidase subunit II compare
Atu1739 -1.2 -3.2 permease compare
Atu4149 -1.2 -7.0 UDP-glucose 6-dehydrogenase compare
Atu0051 -1.1 -5.5 two component sensor kinase compare
Atu3739 -1.1 -1.7 phosphoglycerate kinase compare
Atu0486 -1.1 -5.0 dihydroorotate dehydrogenase compare
Atu2728 -1.1 -4.0 beta (1-->2) glucan export ATP-binding protein compare
Atu2585 -1.1 -5.1 hypothetical protein compare
Atu3763 -1.1 -1.6 hypothetical protein compare
Atu2052 -1.0 -4.8 hypothetical protein compare
Atu4072 -1.0 -1.5 nodulation protein N compare
Atu0687 -1.0 -1.2 hypothetical protein compare
Atu1364 -1.0 -4.9 ATP-dependent Clp protease, ATP-binding subunit compare
Atu2083 -1.0 -3.1 DNA repair protein RecN compare
Atu0971 -1.0 -3.5 two component sensor kinase compare
Atu3598 -1.0 -2.2 thiol:disulfide interchange protein compare
Atu4888 -1.0 -3.6 hypothetical protein compare
Atu0036 -0.9 -2.9 hypothetical protein compare
Atu0331 -0.9 -2.0 sigma-54 modulation protein compare
Atu1163 -0.9 -2.0 exopolysaccharide II synthesis transcriptional activator ExpG compare
Atu8159 -0.9 -3.3 hypothetical protein compare
Atu2824 -0.9 -4.0 hypothetical protein compare
Atu0031 -0.9 -1.6 PTS system, IIA component compare
Atu1030 -0.9 -1.4 GTP pyrophosphohydrolase/synthetase, RelA/SpoT family compare
Atu4882 -0.9 -2.0 hypothetical protein compare
Atu3593 -0.9 -4.9 hypothetical protein compare
Atu4469 -0.8 -3.6 iron ABC transporter permease compare
Atu8018 -0.8 -1.0 hypothetical protein compare
Atu1683 -0.8 -2.2 hypothetical protein compare
Atu1225 -0.8 -1.8 hypothetical protein compare
Atu0361 -0.8 -2.5 transcriptional regulator compare
Atu4884 -0.8 -3.1 hypothetical protein compare
Atu2800 -0.8 -2.6 precorrin-3B C17-methyltransferase compare
Atu2073 -0.8 -4.2 membrane protein compare
Atu3018 -0.8 -3.3 hypothetical protein compare
Atu3911 -0.8 -2.8 hypothetical protein compare
Atu4773 -0.8 -1.7 two component response regulator compare
Atu1694 -0.8 -3.0 hypothetical protein compare
Atu3202 -0.8 -6.6 RND multidrug efflux transporter compare
Atu1701 -0.8 -2.0 protein-L-isoaspartate O-methyltransferase compare
Atu8202 -0.8 -3.1 hypothetical protein compare
Atu2270 -0.7 -1.6 ATP-dependent Clp protease, proteolytic subunit compare
Atu1667 -0.7 -1.7 hypothetical protein compare
Atu4468 -0.7 -4.7 iron transport ABC transporter permease compare
Atu4879 -0.7 -4.1 hypothetical protein compare
Atu3016 -0.7 -2.8 phosphoglyceromutase compare
Atu1542 -0.7 -3.9 Bifunctional adenosylcobalamin biosynthesis protein cobP compare
Atu1140 -0.7 -3.8 phosphoribosyalaminoimidazole-succinocarboxamide synthase compare
Atu0836 -0.7 -2.3 Glutathione-S-transferase compare
Atu0062 -0.7 -4.3 transcriptional regulator, ROK family compare
Atu0149 -0.7 -2.6 enoyl-(acyl-carrier-protein) reductase compare
Atu6114 -0.7 -1.5 hypothetical protein compare
Atu3015 -0.7 -3.3 hypothetical protein compare
Atu1850 -0.7 -3.1 phosphoribosylformylglycinamidine synthetase II compare
Atu0434 -0.7 -1.9 2'-deoxycytidine 5'-triphosphate deaminase compare
Atu3395 -0.7 -3.8 iron (III ABC transporter permease ABC transporter permease compare
Atu2832 -0.7 -2.6 tRNA modification GTPase compare
Atu3663 -0.7 -1.4 hypothetical protein compare
Atu2640 -0.7 -2.9 hypothetical protein compare
Atu2464 -0.7 -2.1 formyltetrahydrofolate deformylase compare
Atu1307 -0.7 -2.1 dihydroorotase compare
Atu3727 -0.7 -2.0 hypothetical protein compare
Atu4890 -0.6 -1.4 IS426 transposase compare
Atu0339 -0.6 -2.8 hypothetical protein compare
Atu0124 -0.6 -2.7 hypothetical protein compare
Atu1446 -0.6 -1.5 two component response regulator compare
Atu2344 -0.6 -2.4 lactoylglutathione lyase compare
Atu3755 -0.6 -3.0 phosphoribosylaminoimidazole carboxylase ATPase subunit compare
Atu3746 -0.6 -2.7 hypothetical protein compare
Atu2692 -0.6 -2.6 intracellular septation protein compare
Atu0777 -0.6 -0.9 hypothetical protein compare
Atu4610 -0.6 -4.0 sugar nucleotide epimerase/dehydratase compare
Atu4099 -0.6 -3.1 hypothetical protein compare
Atu3963 -0.6 -4.0 GntR family transcriptional regulator compare
Atu8138 -0.6 -1.4 hypothetical protein compare
Atu3798 -0.6 -2.7 TetR family transcriptional regulator compare
Atu4878 -0.6 -3.0 hypothetical protein compare
Atu1759 -0.6 -4.6 L-serine dehydratase compare
Atu2772 -0.6 -3.1 Invasion protein A compare
Atu3020 -0.6 -3.7 GntR family transcriptional regulator compare
Atu2805 -0.6 -2.7 cobalamin synthesis protein compare
Atu3628 -0.6 -2.8 hypothetical protein compare
Atu2793 -0.6 -3.0 cobyrinic acid a,c-diamide synthase compare
Atu1333 -0.6 -1.8 outer membrane protein compare
Atu1891 -0.6 -1.8 cobalamin biosynthesis protein compare
Atu1099 -0.6 -3.3 hypothetical protein compare
Atu2801 -0.6 -2.7 precorrin-2 C20 methyltransferase compare
Atu2808 -0.6 -3.3 cobyric acid synthase compare
Atu8156 -0.6 -1.9 hypothetical protein compare
Atu6106 -0.6 -2.9 conserved hypothetical protein compare
Atu3886 -0.6 -3.3 lysophospholipase compare
Atu1513 -0.6 -3.0 ABC excinuclease subunit A compare
Atu3203 -0.6 -3.1 RND multidrug efflux membrane permease compare
Atu0115 -0.6 -0.9 hypothetical protein compare
Atu0723 -0.6 -1.1 FAD dependent oxidoreductase compare
Atu3023 -0.6 -4.4 sugar ABC transporter permease compare
Atu3579 -0.6 -2.6 lactoylglutathione lyase compare
Atu1645 -0.6 -3.2 ABC transporter, substrate binding protein compare
Atu0824 -0.6 -1.0 hypothetical protein compare
Atu3486 -0.6 -1.5 DeoR family transcriptional regulator compare
Atu1470 -0.6 -1.0 Camphor resistance protein compare
Atu3336 -0.6 -1.5 hypothetical protein compare
Atu2796 -0.5 -2.7 precorrin-4 C11-methyltransferase compare
Atu3505 -0.5 -3.2 3-hydroxyisobutyryl-CoA hydrolase compare
Atu1646 -0.5 -2.0 ABC transporter, nucleotide binding/ATPase protein compare
Atu5125 -0.5 -2.6 GntR family transcriptional regulator compare
Atu3012 -0.5 -1.2 hypothetical protein compare
Atu8012 -0.5 -0.9 hypothetical protein compare
Atu2041 -0.5 -1.5 acetyltransferase compare
Atu4055 -0.5 -3.6 endo-1,3-1,4-beta-glycanase compare
Atu4876 -0.5 -4.5 oxidoreductase compare
Atu0225 -0.5 -0.8 hypothetical protein compare
Atu3019 -0.5 -4.1 hypothetical protein compare
Atu0190 -0.5 -3.1 ABC transporter, nucleotide binding/ATPase protein (peptide) compare
Atu0780 -0.5 -3.2 hypothetical protein compare
Atu3032 -0.5 -2.0 hypothetical protein compare
Atu0923 -0.5 -2.9 hypothetical protein compare
Atu3864 -0.5 -1.9 hypothetical protein compare
Atu4887 -0.5 -2.5 hypothetical protein compare
Atu4881 -0.5 -2.8 hypothetical protein compare
Atu4880 -0.5 -3.9 AraC family transcriptional regulator compare
Atu0565 -0.5 -2.5 hypothetical protein compare
Atu3396 -0.5 -3.5 ABC transporter substrate-binding protein compare
Atu1439 -0.5 -1.7 hypothetical protein compare
Atu1131 -0.5 -3.0 outer membrane protein compare
Atu0647 -0.5 -3.1 phosphoribosylamine--glycine ligase compare
Atu2304 -0.5 -3.3 bacteroid development protein compare
Atu1463 -0.5 -2.1 glycine cleavage system component H compare
Atu3910 -0.5 -2.2 LamB/YcsF family protein compare
Atu2057 -0.5 -1.4 DNA helicase II compare
Atu0257 -0.5 -3.4 hypothetical protein compare
Atu0017 -0.5 -1.6 N-(5-phosphoribosyl) anthranilate isomerase compare
Atu1141 -0.5 -2.5 Phosphoribosylglycinamide synthetase compare
Atu0479 -0.5 -3.1 ABC transporter, substrate binding protein (amino acid) compare
Atu0422 -0.5 -1.4 ABC transporter, membrane spanning protein compare
Atu0926 -0.5 -2.5 hypothetical protein compare
Atu3021 -0.5 -2.6 sugar ABC transporter ATPase compare
Atu1056 -0.5 -2.0 hypothetical protein compare
Atu0040 -0.5 -0.7 phosphoribosylformino-5-aminoimidazole carboxamide ribotide isomerase compare
Atu0153 -0.5 -2.2 transcriptional regulator, Fur family compare
Atu1644 -0.5 -1.7 hypothetical protein compare
Atu1647 -0.5 -3.0 ABC transporter, membrane spanning protein compare
Atu0388 -0.5 -4.0 two component sensor kinase compare
Atu3912 -0.5 -3.3 hypothetical protein compare
Atu1339 -0.5 -1.4 ribonuclease E compare
Atu2462 -0.5 -1.2 hypothetical protein compare
Atu1619 -0.5 -1.8 protein-export membrane protein SECG compare
Atu4872 -0.5 -3.6 LysR family transcriptional regulator compare
Atu8093 -0.5 -2.6 hypothetical protein compare
Atu3518 -0.5 -3.2 bifunctional ornithine acetyltransferase/N-acetylglutamate synthase compare
Atu3779 -0.5 -3.4 lytic murein transglycosylase compare
Atu1500 -0.5 -2.1 rare lipoprotein A compare
Atu4470 -0.5 -3.4 iron ABC transporter ATPase compare
Atu3394 -0.5 -2.5 iron ABC transporter ATPase compare
Atu0503 -0.5 -3.7 enoyl-CoA hydratase compare
Atu0189 -0.5 -1.4 ABC transporter, membrane spanning protein (peptide) compare
Atu0768 -0.5 -3.8 cytochrome-c oxidase chain I compare
Atu0592 -0.5 -2.4 ABC transporter, membrane spanning protein compare
Atu3264 -0.5 -1.7 IclR family transcriptional regulator compare
Atu4873 -0.5 -2.4 TetR family transcriptional regulator compare
Atu1503 -0.5 -0.8 hypothetical protein compare
Atu4889 -0.5 -1.7 hypothetical protein compare
Atu2831 -0.5 -2.6 glucose inhibited division protein A compare
Atu4541 -0.5 -1.9 carboxymuconolactone decarboxylase compare
Atu8165 -0.5 -1.1 hypothetical protein compare


Specific Phenotypes

None in this experiment

For Agrobacterium fabrum C58 in stress experiments

For stress Linalool across organisms