Experiment set11IT061 for Agrobacterium fabrum C58

Compare to:

LB with Linalool 5 mM

200 most important genes:

  gene name fitness t score description  
Atu2207 -2.3 -6.5 two component sensor kinase compare
Atu3469 -2.2 -4.4 phosphoglyceromutase compare
Atu1030 -2.1 -2.7 GTP pyrophosphohydrolase/synthetase, RelA/SpoT family compare
Atu0331 -2.1 -4.1 sigma-54 modulation protein compare
Atu0912 -2.0 -2.5 Na+/H+ antiporter compare
Atu2084 -1.8 -1.6 hypothetical protein compare
Atu3763 -1.8 -1.6 hypothetical protein compare
Atu4217 -1.7 -2.8 TetR family transcriptional regulator compare
Atu2584 -1.6 -6.5 hypothetical protein compare
Atu0784 -1.6 -3.5 hypothetical protein compare
Atu2787 -1.5 -2.0 hypothetical protein compare
Atu1219 -1.5 -1.3 hypothetical protein compare
Atu2577 -1.5 -11.2 ABC transporter, nucleotide binding/ATPase protein compare
Atu2590 -1.4 -9.3 hypothetical protein compare
Atu2585 -1.4 -6.8 hypothetical protein compare
Atu0486 -1.4 -5.7 dihydroorotate dehydrogenase compare
Atu0030 -1.4 -2.4 phosphocarrier protein HPr compare
Atu0141 -1.4 -2.1 cytochrome O ubiquinol oxidase subunit I compare
Atu2592 -1.4 -6.6 hypothetical protein compare
Atu1891 -1.4 -3.5 cobalamin biosynthesis protein compare
Atu0184 -1.3 -3.2 glucokinase compare
Atu0977 -1.3 -5.6 serine protease DO-like protease compare
Atu1327 -1.3 -3.6 NADH-ubiquinone oxidoreductase compare
Atu2582 -1.3 -6.7 UDP-glucose/GDP-mannose dehydrogenase compare
Atu2583 -1.3 -9.5 glycosyltransferase compare
Atu0050 -1.3 -5.7 two component response regulator compare
Atu1359 -1.3 -1.4 dnaK deletion suppressor protein compare
Atu0769 -1.3 -2.0 protoheme IX farnesyltransferase compare
Atu1810 -1.3 -2.0 hypothetical protein compare
Atu3012 -1.3 -2.2 hypothetical protein compare
Atu3598 -1.3 -2.1 thiol:disulfide interchange protein compare
Atu0687 -1.2 -3.5 hypothetical protein compare
Atu0971 -1.2 -3.6 two component sensor kinase compare
Atu4317 -1.2 -2.6 TetR family transcriptional regulator compare
Atu4149 -1.2 -8.5 UDP-glucose 6-dehydrogenase compare
Atu2052 -1.2 -6.6 hypothetical protein compare
Atu1581 -1.2 -2.6 hypothetical protein compare
Atu4148 -1.2 -4.9 UDP-glucuronic acid epimerase compare
Atu4882 -1.2 -2.7 hypothetical protein compare
Atu4888 -1.2 -4.7 hypothetical protein compare
Atu2125 -1.2 -1.9 ABC transporter, nucleotide binding/ATPase protein compare
Atu2591 -1.1 -5.4 glucosyltransferase compare
Atu0298 -1.1 -4.5 orotidine 5 compare
Atu2439 -1.1 -2.1 hypothetical protein compare
Atu4890 -1.0 -2.0 IS426 transposase compare
Atu3780 -1.0 -5.2 hypothetical protein compare
Atu3008 -1.0 -1.1 hypothetical protein compare
Atu0925 -1.0 -3.0 hypothetical protein compare
Atu4055 -1.0 -4.4 endo-1,3-1,4-beta-glycanase compare
Atu0399 -1.0 -2.6 dihydroorotase compare
Atu3739 -1.0 -2.0 phosphoglycerate kinase compare
Atu1076 -1.0 -2.6 colicin V production protein compare
Atu2800 -1.0 -1.6 precorrin-3B C17-methyltransferase compare
Atu0040 -1.0 -1.6 phosphoribosylformino-5-aminoimidazole carboxamide ribotide isomerase compare
Atu0361 -1.0 -2.4 transcriptional regulator compare
Atu3203 -0.9 -5.9 RND multidrug efflux membrane permease compare
Atu3202 -0.9 -7.6 RND multidrug efflux transporter compare
Atu0051 -0.9 -4.6 two component sensor kinase compare
Atu1307 -0.9 -4.6 dihydroorotase compare
Atu0062 -0.9 -4.9 transcriptional regulator, ROK family compare
Atu3712 -0.9 -1.6 hypothetical protein compare
Atu0422 -0.9 -1.7 ABC transporter, membrane spanning protein compare
Atu0153 -0.9 -4.4 transcriptional regulator, Fur family compare
Atu1739 -0.9 -3.6 permease compare
Atu0434 -0.9 -2.4 2'-deoxycytidine 5'-triphosphate deaminase compare
Atu3013 -0.9 -2.3 hypothetical protein compare
Atu0400 -0.9 -3.7 orotate phosphoribosyltransferase compare
Atu3798 -0.9 -4.2 TetR family transcriptional regulator compare
Atu1163 -0.8 -1.3 exopolysaccharide II synthesis transcriptional activator ExpG compare
Atu2824 -0.8 -3.5 hypothetical protein compare
Atu4610 -0.8 -5.6 sugar nucleotide epimerase/dehydratase compare
Atu0142 -0.8 -2.2 cytochrome o ubiquinol oxidase subunit II compare
Atu4072 -0.8 -1.0 nodulation protein N compare
Atu2073 -0.8 -4.4 membrane protein compare
Atu1131 -0.8 -4.3 outer membrane protein compare
Atu1364 -0.8 -4.2 ATP-dependent Clp protease, ATP-binding subunit compare
Atu1308 -0.8 -3.5 aspartate carbamoyl transferase catalytic subunit compare
Atu2692 -0.8 -2.7 intracellular septation protein compare
Atu4144 -0.8 -1.1 hypothetical protein compare
Atu2193 -0.8 -0.9 hypothetical protein compare
Atu2728 -0.8 -3.4 beta (1-->2) glucan export ATP-binding protein compare
Atu1685 -0.8 -1.1 hypothetical protein compare
Atu0886 -0.8 -1.5 hypothetical protein compare
Atu1028 -0.8 -2.1 hypothetical protein compare
Atu0319 -0.8 -1.2 ubiquinone biosynthesis protein compare
Atu0388 -0.7 -5.6 two component sensor kinase compare
Atu0025 -0.7 -1.8 hypothetical protein compare
Atu0780 -0.7 -5.3 hypothetical protein compare
Atu1621 -0.7 -4.0 hypothetical protein compare
Atu3779 -0.7 -4.7 lytic murein transglycosylase compare
Atu3023 -0.7 -4.8 sugar ABC transporter permease compare
Atu3757 -0.7 -1.6 hypothetical protein compare
Atu2796 -0.7 -3.7 precorrin-4 C11-methyltransferase compare
Atu3015 -0.7 -3.5 hypothetical protein compare
Atu1647 -0.7 -4.1 ABC transporter, membrane spanning protein compare
Atu3395 -0.7 -3.8 iron (III ABC transporter permease ABC transporter permease compare
Atu1140 -0.7 -3.6 phosphoribosyalaminoimidazole-succinocarboxamide synthase compare
Atu3016 -0.7 -3.7 phosphoglyceromutase compare
Atu2805 -0.7 -3.3 cobalamin synthesis protein compare
Atu3886 -0.7 -4.0 lysophospholipase compare
Atu2304 -0.7 -4.2 bacteroid development protein compare
Atu3443 -0.7 -2.5 hypothetical protein compare
Atu1225 -0.7 -1.5 hypothetical protein compare
Atu2793 -0.7 -2.8 cobyrinic acid a,c-diamide synthase compare
Atu2684 -0.7 -1.2 hypothetical protein compare
Atu3727 -0.7 -2.7 hypothetical protein compare
Atu2795 -0.7 -4.0 cobalamin biosynthetic protein compare
Atu0435 -0.7 -1.7 tRNA-Gly compare
Atu2799 -0.7 -3.0 precorrin-6x reductase compare
Atu2722 -0.6 -4.0 porin compare
Atu4068 -0.6 -2.3 sarcosine oxidase delta subunit compare
Atu1645 -0.6 -3.9 ABC transporter, substrate binding protein compare
Atu2270 -0.6 -1.6 ATP-dependent Clp protease, proteolytic subunit compare
Atu0036 -0.6 -2.4 hypothetical protein compare
Atu0401 -0.6 -3.0 fructokinase compare
Atu4173 -0.6 -1.6 phosphoenolpyruvate-protein phosphotransferase compare
Atu1141 -0.6 -3.8 Phosphoribosylglycinamide synthetase compare
Atu4541 -0.6 -2.9 carboxymuconolactone decarboxylase compare
Atu1513 -0.6 -2.9 ABC excinuclease subunit A compare
Atu3593 -0.6 -3.9 hypothetical protein compare
Atu0479 -0.6 -4.2 ABC transporter, substrate binding protein (amino acid) compare
Atu2801 -0.6 -2.8 precorrin-2 C20 methyltransferase compare
Atu3010 -0.6 -3.5 hypothetical protein compare
Atu0533 -0.6 -1.4 putative inhibitor of septum formation compare
Atu1373 -0.6 -4.3 hypothetical protein compare
Atu3394 -0.6 -1.6 iron ABC transporter ATPase compare
Atu2831 -0.6 -2.9 glucose inhibited division protein A compare
Atu1592 -0.6 -2.9 hypothetical protein compare
Atu1542 -0.6 -3.3 Bifunctional adenosylcobalamin biosynthesis protein cobP compare
Atu3608 -0.6 -3.0 hypothetical protein compare
Atu0039 -0.6 -1.6 imidazoleglycerol-phosphate synthase cyclase compare
Atu1099 -0.6 -3.7 hypothetical protein compare
Atu2798 -0.6 -2.0 precorrin-6y methyltransferase compare
Atu2640 -0.6 -2.6 hypothetical protein compare
Atu4884 -0.6 -2.4 hypothetical protein compare
Atu0257 -0.6 -4.0 hypothetical protein compare
Atu1175 -0.6 -1.2 hypothetical protein compare
Atu3018 -0.6 -2.4 hypothetical protein compare
Atu3755 -0.6 -2.7 phosphoribosylaminoimidazole carboxylase ATPase subunit compare
Atu0690 -0.6 -1.6 hypothetical protein compare
Atu1447 -0.6 -1.0 two component sensor kinase compare
Atu2286 -0.6 -1.4 hypothetical protein compare
Atu1503 -0.6 -0.9 hypothetical protein compare
Atu0926 -0.6 -2.7 hypothetical protein compare
Atu3353 -0.6 -3.6 mannose-1-phosphate guanylyltransferase compare
Atu0923 -0.6 -2.9 hypothetical protein compare
Atu2821 -0.5 -2.7 transcriptional regulator, GntR family compare
Atu2809 -0.5 -3.3 cobalamin biosynthesis protein compare
Atu4471 -0.5 -4.1 ABC transporter substrate-binding protein compare
Atu3754 -0.5 -1.3 phosphoribosylaminoimidazole carboxylase catalytic subunit compare
Atu2184 -0.5 -2.4 transcriptional regulator, AsnC family compare
Atu0149 -0.5 -1.6 enoyl-(acyl-carrier-protein) reductase compare
Atu3019 -0.5 -3.1 hypothetical protein compare
Atu3009 -0.5 -0.8 exopolysaccharide production protein compare
Atu1204 -0.5 -3.4 potassium uptake protein compare
Atu5088 -0.5 -2.1 hypothetical protein compare
Atu2807 -0.5 -3.4 cob(I)alamin adenosyltransferase compare
Atu3912 -0.5 -3.3 hypothetical protein compare
Atu4099 -0.5 -2.7 hypothetical protein compare
Atu0767 -0.5 -2.8 cytochrome c oxidase subunit II compare
Atu4872 -0.5 -4.2 LysR family transcriptional regulator compare
Atu2554 -0.5 -1.1 lysyl-tRNA synthetase compare
Atu0119 -0.5 -0.9 hypothetical protein compare
Atu0947 -0.5 -2.7 transcriptional regulator, AsnC family compare
Atu8202 -0.5 -2.1 hypothetical protein compare
Atu1499 -0.5 -3.5 penicillin binding protein compare
Atu3740 -0.5 -3.4 fructose bisphosphate aldolase compare
Atu4446 -0.5 -4.0 hypothetical protein compare
Atu3911 -0.5 -1.6 hypothetical protein compare
Atu3021 -0.5 -3.5 sugar ABC transporter ATPase compare
Atu0647 -0.5 -2.6 phosphoribosylamine--glycine ligase compare
Atu0031 -0.5 -0.9 PTS system, IIA component compare
Atu6114 -0.5 -2.4 hypothetical protein compare
Atu3121 -0.5 -0.9 cold shock protein compare
Atu8093 -0.5 -2.2 hypothetical protein compare
Atu4877 -0.5 -3.6 short-chain dehydrogenase compare
Atu2067 -0.5 -0.6 hypothetical protein compare
Atu1644 -0.5 -1.9 hypothetical protein compare
Atu1495 -0.5 -1.9 hypothetical protein compare
Atu4470 -0.5 -2.9 iron ABC transporter ATPase compare
Atu1110 -0.5 -1.7 cytosol aminopeptidase compare
Atu1351 -0.5 -2.4 hypothetical protein compare
Atu3311 -0.5 -4.1 phosphomannose isomerase compare
Atu0488 -0.5 -1.6 hypothetical protein compare
Atu4880 -0.5 -3.6 AraC family transcriptional regulator compare
Atu0976 -0.5 -1.3 cycL protein compare
Atu3496 -0.5 -1.3 hypothetical protein compare
Atu2803 -0.5 -2.2 Cobalamin biosynthesis associated protein compare
Atu4418 -0.5 -1.8 glutaryl-CoA dehydrogenase compare
Atu3579 -0.5 -2.3 lactoylglutathione lyase compare
Atu4887 -0.5 -2.2 hypothetical protein compare
Atu1759 -0.5 -3.1 L-serine dehydratase compare
Atu1620 -0.5 -3.3 triosephosphate isomerase compare
Atu2740 -0.5 -2.4 transcriptional regulator, GntR family compare
Atu2041 -0.5 -0.9 acetyltransferase compare
Atu0427 -0.5 -2.2 hypothetical protein compare
Atu3628 -0.5 -2.0 hypothetical protein compare
Atu1463 -0.5 -1.8 glycine cleavage system component H compare
Atu0502 -0.5 -3.0 acetyl-CoA acetyltransferase compare
Atu4879 -0.5 -2.8 hypothetical protein compare


Specific Phenotypes

None in this experiment

For Agrobacterium fabrum C58 in stress experiments

For stress Linalool across organisms