Experiment set11IT058 for Agrobacterium fabrum C58

Compare to:

LB with Menthol 1.25 mM

200 most detrimental genes:

  gene name fitness t score description  
Atu0925 +0.9 2.0 hypothetical protein compare
Atu0041 +0.8 2.3 glutamine amidotransferase compare
Atu3886 +0.8 6.1 lysophospholipase compare
Atu8056 +0.7 1.5 hypothetical protein compare
Atu4677 +0.7 1.8 hypothetical protein compare
Atu8025 +0.7 2.3 hypothetical protein compare
Atu0931 +0.7 5.5 penicillin binding protein compare
Atu8200 +0.7 3.4 hypothetical protein compare
Atu1892 +0.7 2.6 hypothetical protein compare
Atu0124 +0.7 3.2 hypothetical protein compare
Atu2432 +0.7 2.2 hypothetical protein compare
Atu3183 +0.6 1.2 hypothetical protein compare
Atu0152 +0.6 1.8 hypothetical protein compare
Atu0479 +0.6 4.0 ABC transporter, substrate binding protein (amino acid) compare
Atu5164 +0.6 1.3 type IV secretion protein AvhB3 compare
Atu1182 +0.6 1.4 hypothetical protein compare
Atu3634 +0.6 3.5 penicillin-binding protein dacf precursor compare
Atu0926 +0.6 2.8 hypothetical protein compare
Atu1896 +0.6 2.0 hypothetical protein compare
Atu5513 +0.6 1.9 cold shock protein compare
Atu3775 +0.6 2.1 hypothetical protein compare
Atu3052 +0.6 2.3 MarR family transcriptional regulator compare
Atu1056 +0.5 2.6 hypothetical protein compare
Atu1219 +0.5 1.1 hypothetical protein compare
Atu8035 +0.5 1.4 hypothetical protein compare
Atu1291 +0.5 1.3 hypothetical protein compare
Atu3794 +0.5 3.4 FadR family transcriptional regulator compare
Atu8087 +0.5 0.7 putative peptidoglycan binding protein compare
Atu8191 +0.5 1.5 hypothetical protein compare
Atu0470 +0.5 1.6 hypothetical protein compare
Atu3780 +0.5 3.1 hypothetical protein compare
Atu4290 +0.5 1.1 hypothetical protein compare
Atu8020 +0.5 1.2 hypothetical protein compare
Atu0809 +0.5 0.9 hypothetical protein compare
Atu0806 +0.5 3.7 hypothetical protein compare
Atu1883 +0.5 2.8 hypothetical protein compare
Atu5106 +0.5 2.2 DNA binding protein compare
Atu1685 +0.5 1.0 hypothetical protein compare
Atu3067 +0.4 2.8 hypothetical protein compare
Atu5427 +0.4 2.3 hypothetical protein compare
Atu3628 +0.4 2.5 hypothetical protein compare
Atu1701 +0.4 1.5 protein-L-isoaspartate O-methyltransferase compare
Atu3086 +0.4 2.8 spermidine/putrescine ABC transporter permease compare
Atu0645 +0.4 0.8 hypothetical protein compare
Atu3523 +0.4 2.3 polysaccharide biosynthesis-like protein compare
Atu2235 +0.4 1.5 hypothetical protein compare
Atu4897 +0.4 0.8 hypothetical protein compare
Atu4608 +0.4 3.4 hypothetical protein compare
Atu1499 +0.4 3.0 penicillin binding protein compare
Atu1232 +0.4 1.2 hypothetical protein compare
Atu2249 +0.4 0.9 hypothetical protein compare
Atu3759 +0.4 1.0 hypothetical protein compare
Atu0680 +0.4 1.7 hypothetical protein compare
Atu2391 +0.4 2.0 ABC transporter, substrate binding protein (nitrate/sulfonate/taurine/bicarbonate) compare
Atu2183 +0.4 2.4 lipopolysaccharide core biosynthesis mannosyltransferase compare
Atu4614 +0.4 2.3 glycosyltransferase compare
Atu4200 +0.4 1.7 hypothetical protein compare
Atu3609 +0.4 2.5 1-acyl-sn-glycerol-3-phosphate acyltransferase compare
Atu3044 +0.4 1.5 asparaginase compare
Atu0671 +0.4 2.4 hypothetical protein compare
Atu1550 +0.4 1.5 polypeptide deformylase compare
Atu2193 +0.4 0.6 hypothetical protein compare
Atu0344 +0.4 1.5 hypothetical protein compare
Atu2683 +0.4 1.0 hypothetical protein compare
Atu3567 +0.4 2.2 hypothetical protein compare
Atu1098 +0.4 1.1 hypothetical protein compare
Atu4617 +0.4 2.5 dTDP-D-glucose-4,6-dehydratase compare
Atu3773 +0.4 0.9 hypothetical protein compare
Atu8054 +0.4 0.6 hypothetical protein compare
Atu1435 +0.4 1.0 hypothetical protein compare
Atu3791 +0.4 2.6 L-asparaginase compare
Atu0393 +0.4 2.2 ABC transporter, membrane spanning protein compare
Atu0197 +0.4 2.5 ABC transporter, nucleotide binding/ATPase protein (proline/glycine/betaine) compare
Atu2136 +0.4 2.0 chromosome partitioning protein compare
Atu2335 +0.4 1.2 hypothetical protein compare
Atu3623 +0.4 1.4 DnaJ family molecular chaperone compare
Atu3527 +0.3 2.0 hypothetical protein compare
Atu5451 +0.3 0.7 hypothetical protein compare
Atu0272 +0.3 1.5 transcriptional regulator, MarR family compare
Atu4669 +0.3 2.2 hypothetical protein compare
Atu2058 +0.3 1.8 hypothetical protein compare
Atu5170 +0.3 1.7 type IV secretion protein AvhB9 compare
Atu5540 +0.3 0.6 hypothetical protein compare
Atu0302 +0.3 2.1 tetrapyrrole methylase family protein compare
Atu5142 +0.3 0.7 hypothetical protein compare
Atu1969 +0.3 2.0 hypothetical protein compare
Atu3414 +0.3 2.6 AgaE protein compare
Atu0488 +0.3 1.1 hypothetical protein compare
Atu4486 +0.3 1.3 nitroreductase compare
Atu1213 +0.3 1.0 hypothetical protein compare
Atu2532 +0.3 1.2 transcriptional regulator, MarR family compare
Atu1863 +0.3 1.9 permease compare
Atu1252 +0.3 1.4 hypothetical protein compare
Atu2325 +0.3 1.2 hypothetical protein compare
Atu0190 +0.3 1.8 ABC transporter, nucleotide binding/ATPase protein (peptide) compare
Atu1629 +0.3 0.7 transcriptional regulator, ArsR family compare
Atu4079 +0.3 1.5 hypothetical protein compare
Atu1007 +0.3 1.4 hypothetical protein compare
Atu4155 +0.3 2.0 aliphatic sulfonate ABC transporter permease compare
Atu4615 +0.3 2.5 glucose-1-phosphate thymidylyltransferase compare
Atu3299 +0.3 0.6 hypothetical protein compare
Atu3074 +0.3 1.7 short chain dehydrogenase compare
Atu6131 +0.3 1.8 TraR Antiactivator compare
Atu3779 +0.3 2.5 lytic murein transglycosylase compare
Atu4385 +0.3 2.0 hypothetical protein compare
Atu6104 +0.3 1.8 conserved hypothetical protein compare
Atu3353 +0.3 2.2 mannose-1-phosphate guanylyltransferase compare
Atu3056 +0.3 2.5 beta 1,3 glucan synthase catalytic subunit compare
Atu5034 +0.3 1.5 hypothetical protein compare
Atu4220 +0.3 2.3 short-chain dehydrogenase compare
Atu1455 +0.3 1.1 hypothetical protein compare
Atu0540 +0.3 1.1 hypothetical protein compare
Atu1895 +0.3 1.7 3, 4-dihydroxy-2-butanone 4-phosphate synthase compare
Atu0131 +0.3 1.8 purine nucleoside phosphorylase compare
Atu1472 +0.3 1.5 hydrolase compare
Atu4162 +0.3 2.0 two-component response regulator compare
Atu4454 +0.3 1.4 RpiR family transcriptional regulator compare
Atu2489 +0.3 2.2 hypothetical protein compare
Atu3068 +0.3 2.1 ribokinase compare
Atu0463 +0.3 1.8 hypothetical protein compare
Atu2465 +0.3 1.9 two component sensor kinase compare
Atu3563 +0.3 1.7 transcription elongation factor regulatory protein compare
Atu0961 +0.3 1.0 hypothetical protein compare
Atu2139 +0.3 1.5 aldehyde dehydrogenase compare
Atu3428 +0.3 1.6 hypothetical protein compare
Atu3070 +0.3 2.2 allantoate amidohydrolase compare
Atu4231 +0.3 1.8 formyltetrahydrofolate deformylase compare
Atu2061 +0.3 1.7 hydrolase compare
Atu4607 +0.3 1.9 sugar acetylase compare
Atu0354 +0.3 0.8 ferric uptake regulator compare
Atu3381 +0.3 1.4 LysR family transcriptional regulator compare
Atu3624 +0.3 1.9 stress induced morphogen compare
Atu0381 +0.3 1.1 hypothetical protein compare
Atu4160 +0.3 1.7 RNA polymerase sigma factor compare
Atu8022 +0.3 1.4 hypothetical protein compare
Atu2424 +0.3 1.7 ABC transporter, nucleotide binding/ATPase protein compare
Atu4362 +0.3 1.2 hypothetical protein compare
Atu1475 +0.3 0.9 hypothetical protein compare
Atu3392 +0.3 1.2 methyltransferase compare
Atu4303 +0.3 1.9 hypothetical protein compare
Atu3647 +0.3 1.2 hypothetical protein compare
Atu0876 +0.3 0.8 superoxide dismutase compare
Atu3585 +0.3 1.3 glutathione S-transferase compare
Atu1568 +0.3 1.5 transcriptional regulator, TetR family compare
Atu3838 +0.3 1.5 hypothetical protein compare
Atu1666 +0.3 1.2 hypothetical protein compare
Atu1774 +0.3 1.7 ABC transporter, substrate binding protein (peptide) compare
Atu1371 +0.3 1.4 glycerophosphoryl diester phosphodiesterase compare
Atu3053 +0.3 2.0 peptide ABC transporter ATPase compare
Atu1878 +0.3 1.0 hypothetical protein compare
Atu1965 +0.3 1.5 UDP-glucose 4-epimerase compare
Atu4508 +0.3 2.0 oxoreductase compare
Atu0157 +0.3 2.1 ABC transporter, substrate binding protein compare
Atu3072 +0.3 2.1 peptide synthetase compare
Atu3786 +0.3 1.4 two component response regulator compare
Atu4434 +0.3 1.9 oligopeptide ABC transporter ATPase compare
Atu2668 +0.3 2.0 oxidoreductase compare
Atu4061 +0.3 1.0 exopolysaccharide production repressor protein compare
Atu8029 +0.3 0.8 hypothetical protein compare
Atu5449 +0.3 1.5 heat-shock protein compare
Atu3423 +0.3 0.9 hypothetical protein compare
Atu4746 +0.3 1.9 sugar ABC transporter permease compare
Atu4214 +0.3 1.3 cold shock protein compare
Atu4820 +0.3 1.8 hypothetical protein compare
Atu3092 +0.3 1.7 hypothetical protein compare
Atu3788 +0.3 1.4 potassium-transporting ATPase subunit C compare
Atu0563 +0.3 2.0 flagellar motor switch protein FliG compare
Atu5145 +0.3 1.2 acetyltransferase compare
Atu3560 +0.3 1.7 glycosyltransferase compare
Atu4779 +0.3 1.1 hypothetical protein compare
Atu1861 +0.3 1.9 transporter compare
Atu2732 +0.3 1.4 hippurate hydrolase compare
Atu3311 +0.3 2.1 phosphomannose isomerase compare
Atu0956 +0.3 1.1 phage prohead protease compare
Atu4658 +0.3 1.7 hypothetical protein compare
Atu2113 +0.3 0.8 N-acetylmuramoyl-L-alanine amidase compare
Atu4292 +0.3 1.8 chloramphenicol resistance protein compare
Atu4435 +0.2 0.9 oligopeptide ABC transporter ATPase compare
Atu4238 +0.2 1.4 hydrolase compare
Atu3370 +0.2 1.8 sugar ABC transporter permease compare
Atu1859 +0.2 1.3 glutaminase A compare
Atu0378 +0.2 1.5 hydrolase compare
Atu0965 +0.2 1.8 hypothetical protein compare
Atu1078 +0.2 1.1 hypothetical protein compare
Atu1830 +0.2 0.8 bacterioferritin comigratory protein compare
Atu4262 +0.2 1.8 ABC transporter substrate binding protein compare
Atu4423 +0.2 1.9 ABC transporter permease compare
Atu4280 +0.2 1.6 short-chain dehydrogenase compare
Atu5147 +0.2 1.4 Mg(2+) transport ATPase compare
Atu0163 +0.2 1.6 tonB protein compare
Atu2735 +0.2 1.8 threonine dehydratase compare
Atu2507 +0.2 1.6 ABC transporter, membrane spanning protein (sugar) compare
Atu3155 +0.2 1.3 LysR family transcriptional regulator compare
Atu1264 +0.2 0.9 hypothetical protein compare
Atu3260 +0.2 1.6 ABC transporter substrate binding protein compare
Atu4383 +0.2 1.4 hypothetical protein compare
Atu0193 +0.2 0.9 glutamine synthetase compare
Atu3051 +0.2 1.8 agropine synthesis reductase compare
Atu1834 +0.2 1.6 mutT like protein compare
Atu8046 +0.2 0.9 hypothetical protein compare


Specific Phenotypes

None in this experiment

For Agrobacterium fabrum C58 in stress experiments

For stress Menthol across organisms