Experiment set11IT055 for Agrobacterium fabrum C58

Compare to:

LB with Ferulic Acid 1.25 mM

200 most detrimental genes:

  gene name fitness t score description  
Atu1182 +1.0 3.0 hypothetical protein compare
Atu1952 +1.0 2.3 hypothetical protein compare
Atu1149 +0.9 1.2 adenylate cyclase compare
Atu0479 +0.8 4.8 ABC transporter, substrate binding protein (amino acid) compare
Atu1466 +0.7 2.3 hypothetical protein compare
Atu3773 +0.7 2.3 hypothetical protein compare
Atu8161 +0.7 1.9 hypothetical protein compare
Atu4677 +0.6 1.3 hypothetical protein compare
Atu2432 +0.6 1.9 hypothetical protein compare
Atu1213 +0.6 1.9 hypothetical protein compare
Atu0926 +0.6 3.1 hypothetical protein compare
Atu3886 +0.6 4.4 lysophospholipase compare
Atu1232 +0.6 1.8 hypothetical protein compare
Atu3619 +0.6 1.7 hypothetical protein compare
Atu5164 +0.6 1.3 type IV secretion protein AvhB3 compare
Atu0931 +0.6 4.9 penicillin binding protein compare
Atu2484 +0.6 1.7 hypothetical protein compare
Atu5540 +0.5 0.9 hypothetical protein compare
Atu0925 +0.5 1.1 hypothetical protein compare
Atu0976 +0.5 1.5 cycL protein compare
Atu4214 +0.5 1.5 cold shock protein compare
Atu0477 +0.5 1.0 hypothetical protein compare
Atu1387 +0.5 1.5 transcriptional regulator, GntR family compare
Atu4896 +0.5 1.1 acetyltransferase compare
Atu8191 +0.5 1.5 hypothetical protein compare
Atu5173 +0.5 2.0 dehydrogenase compare
Atu3604 +0.5 0.6 hypoxanthine phosphoribosyltransferase compare
Atu1499 +0.5 3.6 penicillin binding protein compare
Atu3780 +0.5 2.9 hypothetical protein compare
Atu1647 +0.5 2.8 ABC transporter, membrane spanning protein compare
Atu4028 +0.5 2.0 recombination regulator RecX compare
Atu0795 +0.5 1.1 hypothetical protein compare
Atu4454 +0.5 2.0 RpiR family transcriptional regulator compare
Atu3647 +0.5 1.5 hypothetical protein compare
Atu0105 +0.5 1.5 hypothetical protein compare
Atu1366 +0.4 2.4 hypothetical protein compare
Atu4093 +0.4 1.5 hypothetical protein compare
Atu1325 +0.4 1.3 acetyltransferase compare
Atu6112 +0.4 2.0 conserved hypothetical protein compare
Atu1399 +0.4 2.1 ABC transporter, substrate binding protein (amino acid) compare
Atu1566 +0.4 0.9 hypothetical protein compare
Atu1124 +0.4 2.1 hypothetical protein compare
Atu3428 +0.4 2.5 hypothetical protein compare
Atu5155 +0.4 2.3 MarR family transcriptional regulator compare
Atu1517 +0.4 2.4 hypothetical protein compare
Atu1483 +0.4 2.1 cytochrome b561 compare
Atu1007 +0.4 1.5 hypothetical protein compare
Atu1629 +0.4 0.9 transcriptional regulator, ArsR family compare
Atu2236 +0.4 1.8 adenine phosphoribosyltransferase compare
Atu3120 +0.4 0.8 hypothetical protein compare
Atu3092 +0.4 3.0 hypothetical protein compare
Atu1864 +0.4 1.5 putative homoserine/homoserine lactone efflux protein compare
Atu2649 +0.4 2.0 hypothetical protein compare
Atu0703 +0.4 1.4 keto-hydroxyglutarate-aldolase/keto-deoxy- phosphogluconate aldolase compare
Atu6189 +0.4 1.1 protein secretion chaperone compare
Atu2232 +0.4 2.1 ATP-dependent Clp protease adaptor protein ClpS compare
Atu0124 +0.4 2.3 hypothetical protein compare
Atu1660 +0.4 1.7 hypothetical protein compare
Atu3215 +0.4 2.0 oligopeptide ABC transporter ATPase compare
Atu0533 +0.4 0.8 putative inhibitor of septum formation compare
Atu5034 +0.4 1.9 hypothetical protein compare
Atu8035 +0.4 1.1 hypothetical protein compare
Atu0671 +0.4 1.9 hypothetical protein compare
Atu4160 +0.4 2.3 RNA polymerase sigma factor compare
Atu1968 +0.4 1.1 hypothetical protein compare
Atu3794 +0.4 1.9 FadR family transcriptional regulator compare
Atu4459 +0.4 2.3 6-O-methylguanine DNA methyltransferase compare
Atu0997 +0.4 1.7 hypothetical protein compare
Atu0303 +0.4 1.6 hypothetical protein compare
Atu0354 +0.4 1.0 ferric uptake regulator compare
Atu3628 +0.4 2.2 hypothetical protein compare
Atu1637 +0.4 1.8 hypothetical protein compare
Atu5146 +0.3 1.2 hypothetical protein compare
Atu0807 +0.3 2.4 metallo-beta-lactamase superfamily protein compare
Atu2472 +0.3 0.7 hypothetical protein compare
Atu4496 +0.3 2.1 acetyltransferase compare
Atu1058 +0.3 1.5 hypothetical protein compare
Atu2221 +0.3 1.5 Lipid A biosynthesis protein compare
Atu3189 +0.3 2.4 hypothetical protein compare
Atu0375 +0.3 1.3 small heat shock protein compare
Atu1570 +0.3 0.5 hypothetical protein compare
Atu3539 +0.3 1.8 hypothetical protein compare
Atu1653 +0.3 1.8 hypothetical protein compare
Atu8200 +0.3 1.6 hypothetical protein compare
Atu0645 +0.3 0.6 hypothetical protein compare
Atu3634 +0.3 1.4 penicillin-binding protein dacf precursor compare
Atu3468 +0.3 0.5 hypothetical protein compare
Atu1245 +0.3 1.6 agmatinase compare
Atu4854 +0.3 1.4 hypothetical protein compare
Atu3067 +0.3 1.9 hypothetical protein compare
Atu4267 +0.3 2.2 hypothetical protein compare
Atu1971 +0.3 1.6 hypothetical protein compare
Atu0540 +0.3 1.0 hypothetical protein compare
Atu3122 +0.3 1.3 cold shock protein compare
Atu2396 +0.3 1.6 urease accessory protein compare
Atu3072 +0.3 2.7 peptide synthetase compare
Atu0432 +0.3 2.0 O-succinylhomoserine sulfhydrylase compare
Atu4614 +0.3 2.2 glycosyltransferase compare
Atu3654 +0.3 2.2 hypothetical protein compare
Atu2040 +0.3 1.8 phosphoserine phosphatase compare
Atu2671 +0.3 2.1 ABC transporter, membrane spanning protein compare
Atu1863 +0.3 1.9 permease compare
Atu3410 +0.3 1.9 ABC transporter permease compare
Atu0152 +0.3 1.2 hypothetical protein compare
Atu8188 +0.3 2.2 hypothetical protein compare
Atu4053 +0.3 0.9 succinoglycan biosynthesis protein compare
Atu4108 +0.3 2.3 ribonuclease D compare
Atu4458 +0.3 1.7 hypothetical protein compare
Atu4437 +0.3 1.3 LysR family transcriptional regulator compare
Atu0874 +0.3 1.6 acetyltransferase compare
Atu3645 +0.3 2.2 hypothetical protein compare
Atu2657 +0.3 1.1 hypothetical protein compare
Atu3031 +0.3 0.7 hypothetical protein compare
Atu2077 +0.3 1.2 DNA polymerase III, epsilon subunit compare
Atu3642 +0.3 1.9 vgrG protein compare
Atu4162 +0.3 2.0 two-component response regulator compare
Atu3699 +0.3 1.1 hypothetical protein compare
Atu2025 +0.3 1.5 transcriptional regulator compare
Atu2235 +0.3 1.1 hypothetical protein compare
Atu0563 +0.3 2.2 flagellar motor switch protein FliG compare
Atu4504 +0.3 2.2 MarR family transcriptional regulator compare
Atu3562 +0.3 1.7 hypothetical protein compare
Atu2017 +0.3 0.6 hypothetical protein compare
Atu6131 +0.3 1.9 TraR Antiactivator compare
Atu4669 +0.3 2.0 hypothetical protein compare
Atu2368 +0.3 0.7 hypothetical protein compare
Atu5438 +0.3 2.2 3-oxoacyl-ACP reductase compare
Atu1419 +0.3 2.0 transcriptional regulator, GntR family compare
Atu0733 +0.3 1.9 enoyl-CoA hydratase/isomerase compare
Atu1882 +0.3 1.1 usg protein compare
Atu4650 +0.3 2.2 sugar ABC transporter ATPase compare
Atu0827 +0.3 1.6 hypothetical protein compare
Atu4026 +0.3 1.8 hypothetical protein compare
Atu3099 +0.3 1.9 glycerol-3-phosphate transporter ATP-binding subunit compare
Atu0788 +0.3 1.4 hypothetical protein compare
Atu0026 +0.3 0.4 hypothetical protein compare
Atu1139 +0.3 1.0 hypothetical protein compare
Atu8053 +0.3 1.2 hypothetical protein compare
Atu1191 +0.3 1.2 hypothetical protein compare
Atu1967 +0.3 1.6 hypothetical protein compare
Atu3255 +0.3 2.0 dicarboxylate ABC transporter permease compare
Atu1500 +0.3 1.7 rare lipoprotein A compare
Atu1059 +0.3 1.6 hypothetical protein compare
Atu3384 +0.3 1.9 hypothetical protein compare
Atu4345 +0.3 1.7 hypothetical protein compare
Atu8022 +0.3 1.3 hypothetical protein compare
Atu2313 +0.3 1.2 hypothetical protein compare
Atu2148 +0.3 1.5 ABC transporter, membrane spanning protein compare
Atu3272 +0.3 2.0 exopolysaccharide export protein compare
Atu0746 +0.3 1.1 hypothetical protein compare
Atu3095 +0.3 1.1 hypothetical protein compare
Atu1190 +0.3 1.2 hypothetical protein compare
Atu2507 +0.3 1.7 ABC transporter, membrane spanning protein (sugar) compare
Atu0537 +0.3 1.5 histidinol dehydrogenase compare
Atu1666 +0.3 2.0 hypothetical protein compare
Atu3345 +0.3 1.1 6-pyruvoyl tetrahydrobiopterin synthase compare
Atu4406 +0.3 0.8 periplasmic nitrate reductase, ferredoxin-like protein compare
Atu4831 +0.3 1.7 hypothetical protein compare
Atu2457 +0.3 1.4 hypothetical protein compare
Atu8039 +0.3 1.4 hypothetical protein compare
Atu1023 +0.3 0.9 hypothetical protein compare
Atu4288 +0.3 1.8 LysR family transcriptional regulator compare
Atu2424 +0.3 1.6 ABC transporter, nucleotide binding/ATPase protein compare
Atu3996 +0.3 1.3 hypothetical protein compare
Atu4372 +0.3 1.8 ribose ABC transporter permease compare
Atu1912 +0.3 2.1 methyl-accepting chemotaxis protein compare
Atu1871 +0.3 1.5 glutathione S-transferase compare
Atu3065 +0.3 2.3 sugar ABC transporter permease compare
Atu3775 +0.3 1.0 hypothetical protein compare
Atu1476 +0.3 1.6 esterase D compare
Atu3243 +0.3 1.6 hypothetical protein compare
Atu3205 +0.3 2.0 hypothetical protein compare
Atu3051 +0.3 1.7 agropine synthesis reductase compare
Atu2215 +0.3 1.6 hypothetical protein compare
Atu5493 +0.3 1.6 hypothetical protein compare
Atu2177 +0.3 1.2 hypothetical protein compare
Atu1649 +0.3 1.4 hypothetical protein compare
Atu4338 +0.3 1.2 hypothetical protein compare
Atu3299 +0.3 0.7 hypothetical protein compare
Atu3104 +0.3 1.7 alpha-L-arabinofuranosidase compare
Atu2225 +0.3 2.0 transcriptional regulator compare
Atu8151 +0.3 0.8 hypothetical protein compare
Atu4769 +0.3 1.9 hypothetical protein compare
Atu2631 +0.3 1.6 hypothetical protein compare
Atu4027 +0.3 1.8 cytochrome c2 compare
Atu1858 +0.3 1.5 hypothetical protein compare
Atu2130 +0.3 1.1 hypothetical protein compare
Atu4286 +0.3 1.6 hypothetical protein compare
Atu2351 +0.3 1.4 hypothetical protein compare
Atu3252 +0.3 1.5 GntR family transcriptional regulator compare
Atu4197 +0.3 1.6 hypothetical protein compare
Atu3091 +0.3 1.5 hypothetical protein compare
Atu2489 +0.3 1.9 hypothetical protein compare
Atu2020 +0.3 1.4 transcriptional regulator, TetR family compare
Atu5147 +0.3 1.5 Mg(2+) transport ATPase compare
Atu0870 +0.3 1.3 trans-aconitate methyltransferase compare
Atu2670 +0.3 1.5 ABC transporter, nucleotide binding/ATPase protein compare
Atu0041 +0.3 0.7 glutamine amidotransferase compare
Atu4230 +0.3 1.6 glutamine synthetase compare
Atu1435 +0.3 1.3 hypothetical protein compare


Specific Phenotypes

None in this experiment

For Agrobacterium fabrum C58 in stress experiments

For stress Ferulic Acid across organisms