Experiment set11IT051 for Agrobacterium fabrum C58

Compare to:

LB with Guaiacol 5 mM

200 most important genes:

  gene name fitness t score description  
Atu0912 -3.2 -2.9 Na+/H+ antiporter compare
Atu0769 -2.5 -2.9 protoheme IX farnesyltransferase compare
Atu1327 -2.4 -3.2 NADH-ubiquinone oxidoreductase compare
Atu1810 -2.3 -2.5 hypothetical protein compare
Atu3469 -2.3 -4.4 phosphoglyceromutase compare
Atu0434 -2.1 -2.7 2'-deoxycytidine 5'-triphosphate deaminase compare
Atu0142 -1.8 -4.0 cytochrome o ubiquinol oxidase subunit II compare
Atu3763 -1.7 -2.3 hypothetical protein compare
Atu2207 -1.7 -2.1 two component sensor kinase compare
Atu0051 -1.6 -7.0 two component sensor kinase compare
Atu2067 -1.6 -1.5 hypothetical protein compare
Atu0399 -1.6 -5.4 dihydroorotase compare
Atu2585 -1.5 -6.6 hypothetical protein compare
Atu0331 -1.5 -3.6 sigma-54 modulation protein compare
Atu1739 -1.4 -4.8 permease compare
Atu3798 -1.4 -5.8 TetR family transcriptional regulator compare
Atu1449 -1.4 -8.0 potassium uptake protein compare
Atu0030 -1.3 -2.5 phosphocarrier protein HPr compare
Atu2073 -1.3 -4.0 membrane protein compare
Atu1030 -1.3 -2.2 GTP pyrophosphohydrolase/synthetase, RelA/SpoT family compare
Atu0400 -1.3 -4.8 orotate phosphoribosyltransferase compare
Atu4317 -1.3 -3.7 TetR family transcriptional regulator compare
Atu0050 -1.3 -5.2 two component response regulator compare
Atu0486 -1.3 -4.8 dihydroorotate dehydrogenase compare
Atu0184 -1.3 -3.8 glucokinase compare
Atu1446 -1.3 -2.8 two component response regulator compare
Atu0977 -1.2 -3.9 serine protease DO-like protease compare
Atu0141 -1.2 -1.9 cytochrome O ubiquinol oxidase subunit I compare
Atu1204 -1.2 -7.0 potassium uptake protein compare
Atu2125 -1.1 -2.1 ABC transporter, nucleotide binding/ATPase protein compare
Atu4418 -1.1 -5.1 glutaryl-CoA dehydrogenase compare
Atu3429 -1.1 -1.8 hypothetical protein compare
Atu1308 -1.1 -5.3 aspartate carbamoyl transferase catalytic subunit compare
Atu2439 -1.0 -1.4 hypothetical protein compare
Atu1258 -1.0 -4.6 ATP-dependent Clp protease, proteolytic subunit compare
Atu2237 -1.0 -4.4 cytochrome c1 compare
Atu0638 -1.0 -3.1 hypothetical protein compare
Atu0138 -1.0 -5.0 surfeit 1 compare
Atu0401 -1.0 -4.5 fructokinase compare
Atu2238 -0.9 -5.8 ubiquinol-cytochrome c reductase cytochrome b subunit compare
Atu4149 -0.9 -6.7 UDP-glucose 6-dehydrogenase compare
Atu2591 -0.9 -5.9 glucosyltransferase compare
Atu1134 -0.9 -6.3 hypothetical protein compare
Atu1307 -0.9 -2.9 dihydroorotase compare
Atu1468 -0.9 -5.0 hypothetical protein compare
Atu4148 -0.9 -3.8 UDP-glucuronic acid epimerase compare
Atu2590 -0.8 -5.3 hypothetical protein compare
Atu0298 -0.8 -4.6 orotidine 5 compare
Atu1836 -0.8 -1.8 hypothetical protein compare
Atu0784 -0.8 -2.3 hypothetical protein compare
Atu2577 -0.8 -6.9 ABC transporter, nucleotide binding/ATPase protein compare
Atu3739 -0.8 -2.6 phosphoglycerate kinase compare
Atu2583 -0.8 -5.7 glycosyltransferase compare
Atu0503 -0.8 -6.0 enoyl-CoA hydratase compare
Atu0086 -0.8 -0.9 ribosome-binding factor A compare
Atu0185 -0.8 -2.8 methylglyoxal synthase compare
Atu4527 -0.8 -1.7 hypothetical protein compare
Atu2582 -0.7 -4.2 UDP-glucose/GDP-mannose dehydrogenase compare
Atu0533 -0.7 -2.0 putative inhibitor of septum formation compare
Atu2592 -0.7 -4.1 hypothetical protein compare
Atu2584 -0.7 -2.5 hypothetical protein compare
Atu0419 -0.7 -1.8 two component sensor kinase compare
Atu1110 -0.7 -2.6 cytosol aminopeptidase compare
Atu4890 -0.7 -1.5 IS426 transposase compare
Atu3730 -0.7 -1.4 hypothetical protein compare
Atu0630 -0.7 -1.7 hypothetical protein compare
Atu4884 -0.7 -2.8 hypothetical protein compare
Atu2249 -0.7 -1.1 hypothetical protein compare
Atu1364 -0.7 -3.2 ATP-dependent Clp protease, ATP-binding subunit compare
Atu3598 -0.6 -1.3 thiol:disulfide interchange protein compare
Atu2803 -0.6 -2.8 Cobalamin biosynthesis associated protein compare
Atu0039 -0.6 -1.4 imidazoleglycerol-phosphate synthase cyclase compare
Atu0999 -0.6 -4.2 magnesium transport protein compare
Atu2442 -0.6 -2.1 hypothetical protein compare
Atu1359 -0.6 -0.9 dnaK deletion suppressor protein compare
Atu0031 -0.6 -1.2 PTS system, IIA component compare
Atu0296 -0.6 -4.0 NADH-ubiquinone oxidoreductase compare
Atu3005 -0.6 -0.7 hypothetical protein compare
Atu0340 -0.6 -1.4 SAM dependent methyltransferase compare
Atu8202 -0.6 -2.6 hypothetical protein compare
Atu0388 -0.6 -5.2 two component sensor kinase compare
Atu0013 -0.6 -3.0 NAD(P)H-flavin oxidoreductase compare
Atu2239 -0.6 -2.5 ubiquinol-cytochrome C reductase iron-sulfur subunit compare
Atu2184 -0.6 -3.1 transcriptional regulator, AsnC family compare
Atu1685 -0.6 -0.9 hypothetical protein compare
Atu1373 -0.6 -4.0 hypothetical protein compare
Atu0153 -0.6 -3.2 transcriptional regulator, Fur family compare
Atu0029 -0.6 -3.3 S-adenosylhomocysteine hydrolase compare
Atu3293 -0.6 -3.6 D-amino acid dehydrogenase small subunit compare
Atu1466 -0.6 -1.3 hypothetical protein compare
Atu4782 -0.6 -3.1 two component response regulator compare
Atu3698 -0.6 -3.4 thioredoxin compare
Atu3505 -0.6 -3.1 3-hydroxyisobutyryl-CoA hydrolase compare
Atu2832 -0.6 -2.4 tRNA modification GTPase compare
Atu2799 -0.6 -2.1 precorrin-6x reductase compare
Atu0502 -0.6 -2.5 acetyl-CoA acetyltransferase compare
Atu3423 -0.6 -1.4 hypothetical protein compare
Atu3201 -0.6 -3.5 TetR family transcriptional regulator compare
Atu0981 -0.5 -4.2 glutamate-ammonia-ligase adenylyltransferase compare
Atu4077 -0.5 -3.5 glycogen branching protein compare
Atu0025 -0.5 -1.9 hypothetical protein compare
Atu4099 -0.5 -2.7 hypothetical protein compare
Atu3019 -0.5 -3.7 hypothetical protein compare
Atu3009 -0.5 -0.8 exopolysaccharide production protein compare
Atu2783 -0.5 -2.4 acetyltransferase compare
Atu2805 -0.5 -2.4 cobalamin synthesis protein compare
Atu3910 -0.5 -2.8 LamB/YcsF family protein compare
Atu1679 -0.5 -1.4 peptidyl prolyl cis-trans isomerase compare
Atu1904 -0.5 -1.1 transcriptional regulator compare
Atu3697 -0.5 -2.3 ATP-dependent protease LA 2 compare
Atu2267 -0.5 -2.4 hypothetical protein compare
Atu3912 -0.5 -3.4 hypothetical protein compare
Atu4050 -0.5 -1.6 UTP-glucose-1-phosphate uridylyltransferase compare
Atu3486 -0.5 -1.8 DeoR family transcriptional regulator compare
Atu4470 -0.5 -3.3 iron ABC transporter ATPase compare
Atu1470 -0.5 -0.9 Camphor resistance protein compare
Atu1501 -0.5 -2.0 hypothetical protein compare
Atu0943 -0.5 -1.3 hypothetical protein compare
Atu4468 -0.5 -3.1 iron transport ABC transporter permease compare
Atu3911 -0.5 -2.9 hypothetical protein compare
Atu2052 -0.5 -2.9 hypothetical protein compare
Atu3688 -0.5 -2.3 iron(III ABC transporter permease dicitrate ABC transporter permease compare
Atu0976 -0.5 -1.4 cycL protein compare
Atu4471 -0.5 -3.7 ABC transporter substrate-binding protein compare
Atu1573 -0.5 -0.9 hypothetical protein compare
Atu5115 -0.5 -1.3 hypothetical protein compare
Atu4541 -0.5 -2.3 carboxymuconolactone decarboxylase compare
Atu2809 -0.5 -3.1 cobalamin biosynthesis protein compare
Atu1754 -0.5 -1.1 hypothetical protein compare
Atu4446 -0.5 -3.2 hypothetical protein compare
Atu4223 -0.5 -0.9 sarcosine oxidase delta subunit compare
Atu2083 -0.5 -1.7 DNA repair protein RecN compare
Atu0971 -0.5 -1.9 two component sensor kinase compare
Atu4630 -0.5 -1.7 hypothetical protein compare
Atu0062 -0.5 -2.8 transcriptional regulator, ROK family compare
Atu4072 -0.4 -0.8 nodulation protein N compare
Atu4068 -0.4 -0.9 sarcosine oxidase delta subunit compare
Atu3963 -0.4 -2.8 GntR family transcriptional regulator compare
Atu0636 -0.4 -2.5 hypothetical protein compare
Atu2821 -0.4 -2.4 transcriptional regulator, GntR family compare
Atu8167 -0.4 -3.0 putative transmembrane protein compare
Atu2270 -0.4 -0.9 ATP-dependent Clp protease, proteolytic subunit compare
Atu0923 -0.4 -2.0 hypothetical protein compare
Atu0886 -0.4 -0.6 hypothetical protein compare
Atu4889 -0.4 -2.0 hypothetical protein compare
Atu0876 -0.4 -1.1 superoxide dismutase compare
Atu8093 -0.4 -2.1 hypothetical protein compare
Atu4078 -0.4 -3.5 glycogen phosphorylase compare
Atu2793 -0.4 -2.1 cobyrinic acid a,c-diamide synthase compare
Atu3292 -0.4 -3.2 alanine racemase compare
Atu2077 -0.4 -1.4 DNA polymerase III, epsilon subunit compare
Atu1339 -0.4 -1.3 ribonuclease E compare
Atu4671 -0.4 -0.9 response regulator compare
Atu3011 -0.4 -0.7 ArsR family transcriptional regulator compare
Atu4792 -0.4 -0.9 hypothetical protein compare
Atu3510 -0.4 -1.5 amidohydrolase compare
Atu0189 -0.4 -1.0 ABC transporter, membrane spanning protein (peptide) compare
Atu4518 -0.4 -1.4 branched chain amino acid ABC transporter permease compare
Atu3023 -0.4 -2.8 sugar ABC transporter permease compare
Atu5045 -0.4 -1.4 hypothetical protein compare
Atu2634 -0.4 -1.2 hypothetical protein compare
Atu4427 -0.4 -2.5 replicative DNA helicase compare
Atu4882 -0.4 -1.1 hypothetical protein compare
Atu2567 -0.4 -2.3 thiamin biosynthesis protein ThiG compare
Atu1184 -0.4 -1.6 hypothetical protein compare
Atu0225 -0.4 -0.6 hypothetical protein compare
Atu1606 -0.4 -1.4 methionine aminopeptidase compare
Atu5462 -0.4 -1.7 ABC transporter nucleotide binding/ATPase compare
Atu2792 -0.4 -2.8 hypothetical protein compare
Atu4133 -0.4 -1.4 hypothetical protein compare
Atu2831 -0.4 -2.2 glucose inhibited division protein A compare
Atu0645 -0.4 -0.6 hypothetical protein compare
Atu1570 -0.4 -0.5 hypothetical protein compare
Atu2200 -0.4 -1.2 cold shock protein compare
Atu3613 -0.4 -2.1 hypothetical protein compare
Atu0007 -0.4 -2.3 hypothetical protein compare
Atu2824 -0.4 -1.5 hypothetical protein compare
Atu0206 -0.4 -1.5 hypothetical protein compare
Atu1217 -0.4 -1.9 cysteine synthase compare
Atu3935 -0.4 -3.2 N-formimino-L-glutamate deiminase compare
Atu0463 -0.4 -2.0 hypothetical protein compare
Atu2286 -0.4 -0.8 hypothetical protein compare
Atu0953 -0.4 -0.6 hypothetical protein compare
Atu5088 -0.4 -1.6 hypothetical protein compare
Atu2796 -0.4 -2.2 precorrin-4 C11-methyltransferase compare
Atu4872 -0.4 -2.6 LysR family transcriptional regulator compare
Atu2080 -0.4 -2.1 acetyltransferase compare
Atu0201 -0.4 -1.1 hypothetical protein compare
Atu2343 -0.4 -1.6 acetyltransferase compare
Atu3674 -0.4 -2.1 hypothetical protein compare
Atu0011 -0.4 -1.5 transcriptional regulator compare
Atu3887 -0.4 -2.3 small heat shock protein compare
Atu5175 -0.4 -2.5 two component response regulator compare
Atu4290 -0.4 -1.0 hypothetical protein compare
Atu2333 -0.4 -2.5 ATP-dependent RNA helicase compare
Atu5494 -0.4 -1.8 hypothetical protein compare
Atu3014 -0.4 -0.9 hypothetical protein compare
Atu2722 -0.4 -2.0 porin compare
Atu1131 -0.4 -2.7 outer membrane protein compare
Atu2614 -0.4 -2.1 hypothetical protein compare


Specific Phenotypes

For 6 genes in this experiment

For stress Guaiacol in Agrobacterium fabrum C58

For stress Guaiacol across organisms