Experiment set11IT048 for Agrobacterium fabrum C58

Compare to:

LB with Ethanol 652 mM

200 most important genes:

  gene name fitness t score description  
Atu0434 -5.8 -4.0 2'-deoxycytidine 5'-triphosphate deaminase compare
Atu0978 -2.9 -11.1 two component response regulator compare
Atu0979 -2.5 -9.3 two component sensor kinase compare
Atu0769 -2.4 -2.7 protoheme IX farnesyltransferase compare
Atu0086 -2.0 -1.9 ribosome-binding factor A compare
Atu2439 -1.6 -2.8 hypothetical protein compare
Atu1847 -1.5 -3.0 hypothetical protein compare
Atu2207 -1.5 -2.3 two component sensor kinase compare
Atu3469 -1.5 -3.6 phosphoglyceromutase compare
Atu4896 -1.3 -2.0 acetyltransferase compare
Atu1810 -1.3 -2.1 hypothetical protein compare
Atu2125 -1.2 -2.1 ABC transporter, nucleotide binding/ATPase protein compare
Atu0486 -1.2 -4.0 dihydroorotate dehydrogenase compare
Atu8138 -1.2 -1.6 hypothetical protein compare
Atu0912 -1.2 -1.7 Na+/H+ antiporter compare
Atu0400 -1.2 -3.7 orotate phosphoribosyltransferase compare
Atu4610 -1.2 -7.5 sugar nucleotide epimerase/dehydratase compare
Atu3739 -1.1 -3.2 phosphoglycerate kinase compare
Atu0142 -1.1 -2.2 cytochrome o ubiquinol oxidase subunit II compare
Atu0399 -1.1 -4.7 dihydroorotase compare
Atu0184 -1.1 -3.0 glucokinase compare
Atu0298 -1.0 -4.4 orotidine 5 compare
Atu3008 -1.0 -1.1 hypothetical protein compare
Atu1679 -1.0 -2.7 peptidyl prolyl cis-trans isomerase compare
Atu1495 -1.0 -3.4 hypothetical protein compare
Atu3012 -1.0 -1.3 hypothetical protein compare
Atu0051 -1.0 -3.7 two component sensor kinase compare
Atu0031 -0.9 -1.5 PTS system, IIA component compare
Atu2800 -0.9 -2.3 precorrin-3B C17-methyltransferase compare
Atu0050 -0.9 -4.1 two component response regulator compare
Atu2684 -0.9 -1.4 hypothetical protein compare
Atu0659 -0.8 -3.9 NTP pyrophosphohydrolase, MutT family compare
Atu1752 -0.8 -4.3 hypothetical protein compare
Atu3910 -0.8 -4.2 LamB/YcsF family protein compare
Atu0601 -0.8 -5.4 oxidoreductase compare
Atu1683 -0.8 -1.6 hypothetical protein compare
Atu3009 -0.8 -0.9 exopolysaccharide production protein compare
Atu1619 -0.8 -2.6 protein-export membrane protein SECG compare
Atu4470 -0.8 -3.6 iron ABC transporter ATPase compare
Atu4884 -0.8 -2.7 hypothetical protein compare
Atu0986 -0.8 -1.3 hypothetical protein compare
Atu1694 -0.8 -2.9 hypothetical protein compare
Atu2805 -0.8 -4.6 cobalamin synthesis protein compare
Atu0977 -0.8 -2.4 serine protease DO-like protease compare
Atu1439 -0.8 -1.6 hypothetical protein compare
Atu3016 -0.7 -3.8 phosphoglyceromutase compare
Atu0999 -0.7 -3.6 magnesium transport protein compare
Atu6098 -0.7 -0.9 transcriptional regulator, HTH family compare
Atu4890 -0.7 -1.5 IS426 transposase compare
Atu0638 -0.7 -2.3 hypothetical protein compare
Atu1110 -0.7 -2.2 cytosol aminopeptidase compare
Atu4075 -0.7 -3.3 glycogen synthase compare
Atu1103 -0.7 -2.5 rRNA-adenine N6,N6-dimethyltransferase compare
Atu0030 -0.7 -1.4 phosphocarrier protein HPr compare
Atu2057 -0.7 -1.7 DNA helicase II compare
Atu3727 -0.7 -2.2 hypothetical protein compare
Atu4468 -0.7 -4.4 iron transport ABC transporter permease compare
Atu3653 -0.6 -3.2 hypothetical protein compare
Atu4879 -0.6 -3.7 hypothetical protein compare
Atu0535 -0.6 -3.0 hypothetical protein compare
Atu0941 -0.6 -0.8 hypothetical protein compare
Atu2801 -0.6 -2.5 precorrin-2 C20 methyltransferase compare
Atu2831 -0.6 -2.8 glucose inhibited division protein A compare
Atu2692 -0.6 -2.5 intracellular septation protein compare
Atu4317 -0.6 -1.7 TetR family transcriptional regulator compare
Atu1204 -0.6 -3.5 potassium uptake protein compare
Atu2591 -0.6 -3.4 glucosyltransferase compare
Atu3015 -0.6 -3.2 hypothetical protein compare
Atu2824 -0.6 -2.3 hypothetical protein compare
Atu4880 -0.6 -4.3 AraC family transcriptional regulator compare
Atu4616 -0.6 -1.1 dTDP-4-dehydrorhamnose reductase compare
Atu0876 -0.6 -1.3 superoxide dismutase compare
Atu0361 -0.6 -1.2 transcriptional regulator compare
Atu2832 -0.6 -2.6 tRNA modification GTPase compare
Atu0040 -0.6 -1.1 phosphoribosylformino-5-aminoimidazole carboxamide ribotide isomerase compare
Atu4882 -0.6 -1.7 hypothetical protein compare
Atu1511 -0.6 -1.9 hypothetical protein compare
Atu1801 -0.6 -2.2 hypothetical protein compare
Atu3018 -0.6 -2.0 hypothetical protein compare
Atu3516 -0.6 -2.4 MutT family NTP pyrophosphatase compare
Atu1219 -0.6 -0.8 hypothetical protein compare
Atu1177 -0.6 -2.8 hypothetical protein compare
Atu3019 -0.6 -3.8 hypothetical protein compare
Atu1308 -0.6 -2.8 aspartate carbamoyl transferase catalytic subunit compare
Atu4888 -0.6 -2.5 hypothetical protein compare
Atu1307 -0.6 -2.3 dihydroorotase compare
Atu1484 -0.6 -1.9 transcriptional regulator compare
Atu1327 -0.6 -2.2 NADH-ubiquinone oxidoreductase compare
Atu2798 -0.6 -2.4 precorrin-6y methyltransferase compare
Atu2052 -0.5 -3.0 hypothetical protein compare
Atu2795 -0.5 -3.0 cobalamin biosynthetic protein compare
Atu4471 -0.5 -3.9 ABC transporter substrate-binding protein compare
Atu4541 -0.5 -2.3 carboxymuconolactone decarboxylase compare
Atu5115 -0.5 -1.2 hypothetical protein compare
Atu2640 -0.5 -1.9 hypothetical protein compare
Atu4893 -0.5 -2.3 hypothetical protein compare
Atu1581 -0.5 -1.2 hypothetical protein compare
Atu1759 -0.5 -3.1 L-serine dehydratase compare
Atu2344 -0.5 -0.9 lactoylglutathione lyase compare
Atu2073 -0.5 -2.1 membrane protein compare
Atu1364 -0.5 -2.5 ATP-dependent Clp protease, ATP-binding subunit compare
Atu8180 -0.5 -2.9 hypothetical protein compare
Atu0971 -0.5 -1.4 two component sensor kinase compare
Atu2677 -0.5 -2.3 protein tyrosine phosphatase compare
Atu0955 -0.5 -2.3 hypothetical protein compare
Atu3013 -0.5 -2.3 hypothetical protein compare
Atu4582 -0.5 -2.1 ferredoxin compare
Atu4223 -0.5 -1.1 sarcosine oxidase delta subunit compare
Atu5045 -0.5 -1.5 hypothetical protein compare
Atu2577 -0.5 -3.9 ABC transporter, nucleotide binding/ATPase protein compare
Atu4889 -0.5 -2.1 hypothetical protein compare
Atu0344 -0.5 -2.0 hypothetical protein compare
Atu0115 -0.5 -0.7 hypothetical protein compare
Atu3466 -0.5 -1.3 ArsR family transcriptional regulator compare
Atu4527 -0.5 -1.1 hypothetical protein compare
Atu1223 -0.5 -0.9 hypothetical protein compare
Atu0846 -0.5 -1.5 transcriptional regulator, MarR family compare
Atu8159 -0.5 -1.5 hypothetical protein compare
Atu4120 -0.5 -2.7 mandelate racemase compare
Atu1734 -0.5 -1.3 hypothetical protein compare
Atu0149 -0.5 -1.9 enoyl-(acyl-carrier-protein) reductase compare
Atu4892 -0.5 -3.2 hypothetical protein compare
Atu1573 -0.5 -1.1 hypothetical protein compare
Atu2722 -0.5 -2.7 porin compare
Atu4137 -0.5 -1.6 hypothetical protein compare
Atu8033 -0.5 -2.2 hypothetical protein compare
Atu0690 -0.4 -1.2 hypothetical protein compare
Atu2605 -0.4 -1.6 hypothetical protein compare
Atu3023 -0.4 -2.8 sugar ABC transporter permease compare
Atu4630 -0.4 -1.3 hypothetical protein compare
Atu2590 -0.4 -2.7 hypothetical protein compare
Atu1138 -0.4 -2.8 protease VII precursor compare
Atu2583 -0.4 -3.3 glycosyltransferase compare
Atu1302 -0.4 -1.2 hypothetical protein compare
Atu0039 -0.4 -1.1 imidazoleglycerol-phosphate synthase cyclase compare
Atu3031 -0.4 -0.8 hypothetical protein compare
Atu3911 -0.4 -2.3 hypothetical protein compare
Atu2807 -0.4 -2.0 cob(I)alamin adenosyltransferase compare
Atu1359 -0.4 -0.6 dnaK deletion suppressor protein compare
Atu1677 -0.4 -1.9 queuine tRNA-ribosyltransferase compare
Atu1463 -0.4 -1.7 glycine cleavage system component H compare
Atu1285 -0.4 -2.4 metal dependent hydrolase compare
Atu0346 -0.4 -1.1 uridylyltransferase/uridylyl-removing enzyme UTase compare
Atu1779 -0.4 -1.3 hypothetical protein compare
Atu2796 -0.4 -1.8 precorrin-4 C11-methyltransferase compare
Atu4232 -0.4 -1.9 GntR family transcriptional regulator compare
Atu4462 -0.4 -2.3 transcriptional regulator compare
Atu3021 -0.4 -3.0 sugar ABC transporter ATPase compare
Atu4187 -0.4 -0.7 tRNA-Met compare
Atu0153 -0.4 -1.9 transcriptional regulator, Fur family compare
Atu0388 -0.4 -3.2 two component sensor kinase compare
Atu1019 -0.4 -1.6 hypothetical protein compare
Atu0976 -0.4 -0.9 cycL protein compare
Atu2270 -0.4 -0.8 ATP-dependent Clp protease, proteolytic subunit compare
Atu3249 -0.4 -1.9 septum formation inhibitor compare
Atu2793 -0.4 -2.0 cobyrinic acid a,c-diamide synthase compare
Atu1989 -0.4 -1.7 two component response regulator compare
Atu3447 -0.4 -1.7 hypothetical protein compare
Atu3022 -0.4 -3.0 sugar ABC transporter permease compare
Atu2728 -0.4 -1.6 beta (1-->2) glucan export ATP-binding protein compare
Atu2592 -0.4 -2.3 hypothetical protein compare
Atu3815 -0.4 -2.3 GntR family transcriptional regulator compare
Atu3201 -0.4 -3.1 TetR family transcriptional regulator compare
Atu3183 -0.4 -0.5 hypothetical protein compare
Atu0749 -0.4 -1.4 biotin synthesis BioY protein compare
Atu5010 -0.4 -1.7 hypothetical protein compare
Atu4881 -0.4 -2.3 hypothetical protein compare
Atu3746 -0.4 -1.8 hypothetical protein compare
Atu5164 -0.4 -0.6 type IV secretion protein AvhB3 compare
Atu3663 -0.4 -0.8 hypothetical protein compare
Atu5114 -0.4 -1.9 hypothetical protein compare
Atu4149 -0.4 -3.0 UDP-glucose 6-dehydrogenase compare
Atu8144 -0.4 -1.1 hypothetical protein compare
Atu4876 -0.4 -3.1 oxidoreductase compare
Atu0566 -0.4 -1.2 hypothetical protein compare
Atu3429 -0.4 -0.8 hypothetical protein compare
Atu3342 -0.4 -2.3 trehalose utilization-like protein compare
Atu3427 -0.4 -1.0 hypothetical protein compare
Atu0947 -0.4 -2.4 transcriptional regulator, AsnC family compare
Atu4887 -0.4 -1.8 hypothetical protein compare
Atu1344 -0.4 -1.1 hypothetical protein compare
Atu2267 -0.4 -2.0 hypothetical protein compare
Atu3343 -0.4 -2.2 trehalose utilization-like protein compare
Atu2477 -0.4 -1.5 DNA oxidation protective protein, not DNA-binding compare
Atu1260 -0.4 -0.8 hypothetical protein compare
Atu5429 -0.4 -1.7 transcriptional regulator compare
Atu3010 -0.4 -2.3 hypothetical protein compare
Atu0635 -0.4 -2.0 hypothetical protein compare
Atu8057 -0.4 -2.0 hypothetical protein compare
Atu0893 -0.4 -1.4 ABC transporter, nucleotide binding/ATPase protein compare
Atu4749 -0.4 -1.9 fructose transport system kinase compare
Atu2317 -0.4 -1.5 hypothetical protein compare
Atu8154 -0.4 -1.3 Plasmid stabilization system protein compare
Atu2002 -0.4 -1.7 esterase/lipase compare
Atu2821 -0.4 -1.4 transcriptional regulator, GntR family compare
Atu4819 -0.4 -1.6 hypothetical protein compare
Atu4226 -0.4 -2.4 transcriptional regulator compare
Atu1513 -0.4 -1.8 ABC excinuclease subunit A compare
Atu3834 -0.4 -2.5 hypothetical protein compare
Atu2555 -0.4 -1.5 L-lysine 2,3-aminomutase compare


Specific Phenotypes

None in this experiment

For Agrobacterium fabrum C58 in stress experiments

For stress Ethanol across organisms