Experiment set11IT048 for Agrobacterium fabrum C58

Compare to:

LB with Ethanol 652 mM

200 most detrimental genes:

  gene name fitness t score description  
Atu5451 +1.1 3.0 hypothetical protein compare
Atu5540 +0.9 1.6 hypothetical protein compare
Atu8161 +0.8 2.3 hypothetical protein compare
Atu0026 +0.7 1.1 hypothetical protein compare
Atu3120 +0.6 1.2 hypothetical protein compare
Atu1098 +0.6 1.8 hypothetical protein compare
Atu0953 +0.6 0.9 hypothetical protein compare
Atu0041 +0.6 1.7 glutamine amidotransferase compare
Atu0645 +0.6 0.9 hypothetical protein compare
Atu1369 +0.6 2.0 HIT family protein compare
Atu0421 +0.6 1.4 ABC transporter, membrane spanning protein compare
Atu3523 +0.6 3.8 polysaccharide biosynthesis-like protein compare
Atu0530 +0.6 3.3 UDP-galactose 4-epimerase compare
Atu3295 +0.6 2.3 hypothetical protein compare
Atu2634 +0.6 2.0 hypothetical protein compare
Atu6165 +0.6 1.4 hypothetical protein compare
Atu4743 +0.6 3.6 LacI family transcriptional regulator compare
Atu3775 +0.6 2.1 hypothetical protein compare
Atu4677 +0.5 1.0 hypothetical protein compare
Atu2067 +0.5 0.8 hypothetical protein compare
Atu0435 +0.5 1.8 tRNA-Gly compare
Atu4407 +0.5 1.4 periplasmic nitrate reductase, NapD protein compare
Atu1830 +0.5 2.1 bacterioferritin comigratory protein compare
Atu8054 +0.5 0.8 hypothetical protein compare
Atu0516 +0.5 2.5 chemotaxis receiver protein compare
Atu0936 +0.5 1.9 methyltransferase compare
Atu2028 +0.5 1.7 transcriptional regulator, ArsR family compare
Atu0354 +0.5 1.0 ferric uptake regulator compare
Atu0419 +0.5 1.5 two component sensor kinase compare
Atu1182 +0.5 0.9 hypothetical protein compare
Atu2472 +0.5 1.4 hypothetical protein compare
Atu3794 +0.5 3.1 FadR family transcriptional regulator compare
Atu1967 +0.5 3.0 hypothetical protein compare
Atu2424 +0.5 2.4 ABC transporter, nucleotide binding/ATPase protein compare
Atu1236 +0.5 2.9 polysaccharide biosynthesis glycosyltransferase compare
Atu2262 +0.5 1.9 hypothetical protein compare
Atu4342 +0.5 1.2 hypothetical protein compare
Atu4079 +0.5 1.8 hypothetical protein compare
Atu0956 +0.5 2.0 phage prohead protease compare
Atu3619 +0.4 1.3 hypothetical protein compare
Atu8188 +0.4 3.4 hypothetical protein compare
Atu1323 +0.4 1.7 hypothetical protein compare
Atu0193 +0.4 2.5 glutamine synthetase compare
Atu0544 +0.4 1.2 hypothetical protein compare
Atu0640 +0.4 1.1 hypothetical protein compare
Atu3345 +0.4 1.3 6-pyruvoyl tetrahydrobiopterin synthase compare
Atu3721 +0.4 1.4 hypothetical protein compare
Atu2368 +0.4 1.0 hypothetical protein compare
Atu2633 +0.4 1.5 RhtB family transporter compare
Atu0134 +0.4 1.6 hypothetical protein compare
Atu1447 +0.4 1.4 two component sensor kinase compare
Atu3465 +0.4 1.4 metallo-beta-lactamase superfamily protein compare
Atu2484 +0.4 1.0 hypothetical protein compare
Atu4737 +0.4 1.6 hypothetical protein compare
Atu3610 +0.4 2.5 transporter compare
Atu2377 +0.4 3.4 succinoglycan biosynthesis transport protein compare
Atu0681 +0.4 1.4 hypothetical protein compare
Atu8039 +0.4 2.3 hypothetical protein compare
Atu1639 +0.4 1.3 hypothetical protein compare
Atu2249 +0.4 0.8 hypothetical protein compare
Atu1124 +0.4 1.8 hypothetical protein compare
Atu4028 +0.4 1.9 recombination regulator RecX compare
Atu2757 +0.4 1.8 nitrogen regulatory protein PII compare
Atu3780 +0.4 2.5 hypothetical protein compare
Atu2675 +0.4 1.5 hypothetical protein compare
Atu0413 +0.4 0.7 stress induced protein compare
Atu8018 +0.4 0.6 hypothetical protein compare
Atu0206 +0.4 1.2 hypothetical protein compare
Atu0723 +0.4 0.7 FAD dependent oxidoreductase compare
Atu0948 +0.4 1.4 hypothetical protein compare
Atu4472 +0.4 1.3 hypothetical protein compare
Atu5130 +0.4 1.4 attachment protein compare
Atu2367 +0.4 1.5 hypothetical protein compare
Atu2450 +0.4 1.5 hypothetical protein compare
Atu3699 +0.4 2.1 hypothetical protein compare
Atu2669 +0.4 1.4 RhtB family transporter compare
Atu8022 +0.4 1.4 hypothetical protein compare
Atu2055 +0.4 2.2 HlyD family secretion protein compare
Atu4410 +0.4 1.9 periplasmic nitrate reductase, cytochrome c-type protein compare
Atu0585 +0.4 0.8 hypothetical protein compare
Atu1239 +0.4 2.9 exopolysaccharide production protein compare
Atu1238 +0.4 2.8 polysaccharide export protein compare
Atu2372 +0.4 2.5 UDP-hexose transferase compare
Atu1725 +0.4 1.4 hypothetical protein compare
Atu8035 +0.4 1.0 hypothetical protein compare
Atu2116 +0.4 1.2 hypothetical protein compare
Atu1389 +0.4 1.7 ABC transporter, membrane spanning protein compare
Atu1836 +0.4 0.9 hypothetical protein compare
Atu0827 +0.4 1.9 hypothetical protein compare
Atu0883 +0.4 1.2 hypothetical protein compare
Atu2375 +0.4 2.6 UDP-hexose transferase compare
Atu0573 +0.3 2.0 transcriptional regulator compare
Atu0201 +0.3 0.6 hypothetical protein compare
Atu1021 +0.3 1.2 outer membrane protein compare
Atu1570 +0.3 0.5 hypothetical protein compare
Atu1191 +0.3 1.5 hypothetical protein compare
Atu3539 +0.3 2.0 hypothetical protein compare
Atu8087 +0.3 0.4 putative peptidoglycan binding protein compare
Atu1724 +0.3 1.6 hypothetical protein compare
Atu1803 +0.3 2.2 cold shock protein compare
Atu2479 +0.3 1.9 tRNA-Gly compare
Atu4214 +0.3 1.4 cold shock protein compare
Atu2163 +0.3 0.4 hypothetical protein compare
Atu4486 +0.3 1.4 nitroreductase compare
Atu1865 +0.3 2.0 hypothetical protein compare
Atu2003 +0.3 1.7 hypothetical protein compare
Atu1333 +0.3 1.5 outer membrane protein compare
Atu1895 +0.3 2.0 3, 4-dihydroxy-2-butanone 4-phosphate synthase compare
Atu1525 +0.3 1.7 hypothetical protein compare
Atu0515 +0.3 1.2 hypothetical protein compare
Atu4454 +0.3 1.8 RpiR family transcriptional regulator compare
Atu4796 +0.3 2.6 hypothetical protein compare
Atu3634 +0.3 0.9 penicillin-binding protein dacf precursor compare
Atu5107 +0.3 1.2 hypothetical protein compare
Atu6112 +0.3 1.5 conserved hypothetical protein compare
Atu3926 +0.3 1.2 translation initiation inhibitor compare
Atu2313 +0.3 1.7 hypothetical protein compare
Atu5469 +0.3 2.3 DNA polymerase IV compare
Atu4820 +0.3 2.2 hypothetical protein compare
Atu0861 +0.3 1.2 hypothetical protein compare
Atu5145 +0.3 1.4 acetyltransferase compare
Atu1005 +0.3 1.7 hypothetical protein compare
Atu1185 +0.3 1.5 hypothetical protein compare
Atu3973 +0.3 1.8 hypothetical protein compare
Atu2617 +0.3 1.3 chemotaxis protein compare
Atu5173 +0.3 1.1 dehydrogenase compare
Atu1880 +0.3 1.4 ABC transporter, membrane spanning protein (amino acid) compare
Atu3459 +0.3 2.2 ABC transporter permease compare
Atu2573 +0.3 1.4 hypothetical protein compare
Atu4854 +0.3 1.4 hypothetical protein compare
Atu6030 +0.3 2.1 ORF13 hypothetical protein compare
Atu0703 +0.3 0.9 keto-hydroxyglutarate-aldolase/keto-deoxy- phosphogluconate aldolase compare
Atu4706 +0.3 1.3 formate dehydrogenase subunit gamma compare
Atu8200 +0.3 1.1 hypothetical protein compare
Atu6100 +0.3 2.2 conserved hypothetical protein compare
Atu1121 +0.3 1.6 lignin degradation protein compare
Atu8166 +0.3 1.6 hypothetical protein compare
Atu2285 +0.3 2.1 transcriptional regulator, LuxR family compare
Atu1969 +0.3 1.9 hypothetical protein compare
Atu3324 +0.3 1.3 hypothetical protein compare
Atu2694 +0.3 0.6 hypothetical protein compare
Atu1235 +0.3 2.4 hypothetical protein compare
Atu0997 +0.3 1.4 hypothetical protein compare
Atu4650 +0.3 1.4 sugar ABC transporter ATPase compare
Atu3067 +0.3 1.5 hypothetical protein compare
Atu8056 +0.3 0.5 hypothetical protein compare
Atu6179 +0.3 1.3 virA/G regulated protein compare
Atu3908 +0.3 2.0 GntR family transcriptional regulator compare
Atu8122 +0.3 1.7 hypothetical protein compare
Atu4297 +0.3 1.6 AraC family transcriptional regulator compare
Atu0230 +0.3 0.9 hypothetical protein compare
Atu1446 +0.3 0.8 two component response regulator compare
Atu2131 +0.3 1.6 hypothetical protein compare
Atu3645 +0.3 2.1 hypothetical protein compare
Atu4362 +0.3 1.1 hypothetical protein compare
Atu3678 +0.3 1.0 siderophore biosynthesis protein compare
Atu4053 +0.3 0.8 succinoglycan biosynthesis protein compare
Atu0156 +0.3 1.8 hypothetical protein compare
Atu8163 +0.3 1.5 hypothetical protein compare
Atu2311 +0.3 1.9 xanthine dehydrogenase chaperone compare
Atu1203 +0.3 1.0 hypothetical protein compare
Atu4134 +0.3 1.5 hypothetical protein compare
Atu0719 +0.3 1.7 transacetylase compare
Atu3070 +0.3 1.8 allantoate amidohydrolase compare
Atu1483 +0.3 1.6 cytochrome b561 compare
Atu1494 +0.3 1.6 metal dependent hydrolase compare
Atu3506 +0.3 1.1 hypothetical protein compare
Atu0696 +0.3 1.3 phosphatase compare
Atu1566 +0.3 0.4 hypothetical protein compare
Atu2075 +0.3 1.7 chemotaxis protein compare
Atu2236 +0.3 1.3 adenine phosphoribosyltransferase compare
Atu6125 +0.3 1.8 conjugative transfer protein, Dtr system compare
Atu1888 +0.3 2.0 two component sensor kinase compare
Atu0163 +0.3 1.7 tonB protein compare
Atu2729 +0.3 1.0 hypothetical protein compare
Atu2465 +0.3 1.6 two component sensor kinase compare
Atu0525 +0.3 1.3 transcriptional regulator, LuxR family compare
Atu4061 +0.3 1.3 exopolysaccharide production repressor protein compare
Atu3773 +0.3 0.8 hypothetical protein compare
Atu3777 +0.3 2.1 hypothetical protein compare
Atu3860 +0.3 2.4 hypothetical protein compare
Atu1690 +0.3 1.6 molybdopterin biosynthesis protein compare
Atu3886 +0.3 1.6 lysophospholipase compare
Atu1850 +0.3 0.9 phosphoribosylformylglycinamidine synthetase II compare
Atu4724 +0.3 0.8 hypothetical protein compare
Atu4549 +0.3 1.9 beta-ketoadipyl CoA thiolase compare
Atu0212 +0.3 1.3 hypothetical protein compare
Atu8170 +0.3 1.5 hypothetical protein compare
Atu3763 +0.3 0.5 hypothetical protein compare
Atu0386 +0.3 0.8 hypothetical protein compare
Atu1592 +0.3 1.6 hypothetical protein compare
Atu0931 +0.3 2.1 penicillin binding protein compare
Atu0722 +0.3 1.2 hypothetical protein compare
Atu3423 +0.3 0.8 hypothetical protein compare
Atu2431 +0.3 1.2 hypothetical protein compare
Atu3099 +0.3 2.0 glycerol-3-phosphate transporter ATP-binding subunit compare
Atu1754 +0.3 0.6 hypothetical protein compare
Atu1264 +0.3 1.5 hypothetical protein compare
Atu6131 +0.3 1.3 TraR Antiactivator compare
Atu1249 +0.3 1.6 hypothetical protein compare


Specific Phenotypes

None in this experiment

For Agrobacterium fabrum C58 in stress experiments

For stress Ethanol across organisms