Experiment set11IT042 for Agrobacterium fabrum C58

Compare to:

LB with Pyrogallol 0.5 mM

200 most detrimental genes:

  gene name fitness t score description  
Atu0464 +1.5 10.9 hypothetical protein compare
Atu0450 +1.5 10.0 transcription antitermination protein compare
Atu4166 +1.3 5.8 UDP-glucose 4-epimerase compare
Atu0462 +1.1 8.0 endolysin compare
Atu5540 +1.0 1.7 hypothetical protein compare
Atu3005 +1.0 1.4 hypothetical protein compare
Atu0461 +0.9 7.7 hypothetical protein compare
Atu0413 +0.9 3.5 stress induced protein compare
Atu4677 +0.9 1.9 hypothetical protein compare
Atu0463 +0.9 5.9 hypothetical protein compare
Atu4616 +0.9 2.3 dTDP-4-dehydrorhamnose reductase compare
Atu0457 +0.8 6.2 hypothetical protein compare
Atu8127 +0.8 7.3 hypothetical protein compare
Atu0460 +0.8 6.3 hypothetical protein compare
Atu4614 +0.8 4.9 glycosyltransferase compare
Atu8126 +0.8 4.6 putative phage tail protein I compare
Atu4609 +0.8 6.2 glycosyltransferase compare
Atu0454 +0.8 5.0 hypothetical protein compare
Atu0470 +0.8 2.5 hypothetical protein compare
Atu0469 +0.7 5.4 hypothetical protein compare
Atu2058 +0.7 3.2 hypothetical protein compare
Atu0458 +0.7 5.1 hypothetical protein compare
Atu4615 +0.7 5.0 glucose-1-phosphate thymidylyltransferase compare
Atu1021 +0.7 1.7 outer membrane protein compare
Atu8125 +0.7 5.8 hypothetical protein compare
Atu2694 +0.7 1.9 hypothetical protein compare
Atu4608 +0.7 5.7 hypothetical protein compare
Atu8083 +0.7 5.8 hypothetical protein compare
Atu8128 +0.7 4.5 putative bacteriophage P2 tail protein compare
Atu4617 +0.7 4.8 dTDP-D-glucose-4,6-dehydratase compare
Atu0452 +0.6 4.8 hypothetical protein compare
Atu0453 +0.6 5.0 hypothetical protein compare
Atu0468 +0.6 4.0 hypothetical protein compare
Atu1570 +0.6 1.0 hypothetical protein compare
Atu8054 +0.6 1.1 hypothetical protein compare
Atu8123 +0.6 2.9 hypothetical protein compare
Atu4618 +0.6 4.6 dTDP-rhamnose-3,5-epimerase compare
Atu3012 +0.6 1.4 hypothetical protein compare
Atu8191 +0.6 1.4 hypothetical protein compare
Atu2432 +0.6 1.8 hypothetical protein compare
Atu4897 +0.6 0.8 hypothetical protein compare
Atu0437 +0.6 4.5 hypothetical protein compare
Atu1760 +0.5 1.3 hypothetical protein compare
Atu0031 +0.5 1.4 PTS system, IIA component compare
Atu2573 +0.5 3.2 hypothetical protein compare
Atu3423 +0.5 1.2 hypothetical protein compare
Atu3465 +0.5 2.1 metallo-beta-lactamase superfamily protein compare
Atu0041 +0.5 1.5 glutamine amidotransferase compare
Atu3183 +0.5 0.8 hypothetical protein compare
Atu2683 +0.5 1.5 hypothetical protein compare
Atu4238 +0.5 2.5 hydrolase compare
Atu0438 +0.5 4.4 phage-related integrase compare
Atu8056 +0.5 0.9 hypothetical protein compare
Atu8124 +0.5 3.1 hypothetical protein compare
Atu0105 +0.5 1.0 hypothetical protein compare
Atu0436 +0.5 4.1 hypothetical protein compare
Atu3759 +0.5 1.2 hypothetical protein compare
Atu0883 +0.5 1.8 hypothetical protein compare
Atu4486 +0.5 2.2 nitroreductase compare
Atu3120 +0.5 0.5 hypothetical protein compare
Atu0471 +0.5 2.1 hypothetical protein compare
Atu0645 +0.5 0.9 hypothetical protein compare
Atu4869 +0.5 2.2 hypothetical protein compare
Atu1009 +0.5 1.3 hypothetical protein compare
Atu6165 +0.5 0.9 hypothetical protein compare
Atu6036 +0.5 1.1 entry-exclusion protein compare
Atu5451 +0.5 0.9 hypothetical protein compare
Atu8122 +0.5 2.9 hypothetical protein compare
Atu1098 +0.5 2.0 hypothetical protein compare
Atu0503 +0.5 3.6 enoyl-CoA hydratase compare
Atu8188 +0.5 3.4 hypothetical protein compare
Atu3466 +0.4 1.5 ArsR family transcriptional regulator compare
Atu1182 +0.4 0.8 hypothetical protein compare
Atu1503 +0.4 0.9 hypothetical protein compare
Atu3609 +0.4 2.0 1-acyl-sn-glycerol-3-phosphate acyltransferase compare
Atu0467 +0.4 1.7 hypothetical protein compare
Atu1258 +0.4 2.7 ATP-dependent Clp protease, proteolytic subunit compare
Atu3712 +0.4 1.0 hypothetical protein compare
Atu4003 +0.4 2.8 hypothetical protein compare
Atu8053 +0.4 2.1 hypothetical protein compare
Atu3289 +0.4 2.0 thiamine-phosphate pyrophosphorylase compare
Atu3773 +0.4 1.6 hypothetical protein compare
Atu1203 +0.4 1.0 hypothetical protein compare
Atu2680 +0.4 2.5 ABC transporter, nucleotide binding/ATPase protein compare
Atu3009 +0.4 0.6 exopolysaccharide production protein compare
Atu0026 +0.4 0.6 hypothetical protein compare
Atu1754 +0.4 1.3 hypothetical protein compare
Atu5517 +0.4 1.8 hypothetical protein compare
Atu0435 +0.4 0.7 tRNA-Gly compare
Atu4134 +0.4 2.6 hypothetical protein compare
Atu3313 +0.4 1.5 hypothetical protein compare
Atu1517 +0.4 1.6 hypothetical protein compare
Atu2608 +0.4 2.3 N-acetylglucosamine-6-phosphate deacetylase compare
Atu0502 +0.4 2.8 acetyl-CoA acetyltransferase compare
Atu3647 +0.4 1.3 hypothetical protein compare
Atu1685 +0.4 0.8 hypothetical protein compare
Atu2768 +0.4 1.7 hypothetical protein compare
Atu8094 +0.4 1.3 hypothetical protein compare
Atu4200 +0.4 1.6 hypothetical protein compare
Atu3509 +0.4 2.2 hypothetical protein compare
Atu4792 +0.4 0.9 hypothetical protein compare
Atu3031 +0.4 0.7 hypothetical protein compare
Atu4290 +0.4 1.2 hypothetical protein compare
Atu8200 +0.4 1.5 hypothetical protein compare
Atu3835 +0.4 1.7 hypothetical protein compare
Atu1213 +0.4 1.0 hypothetical protein compare
Atu6039 +0.4 1.9 conjugal transfer protein compare
Atu1884 +0.4 2.3 ABC transporter, substrate binding protein (aliphatic sulfonate) compare
Atu0365 +0.4 2.6 hypothetical protein compare
Atu0681 +0.4 2.3 hypothetical protein compare
Atu4122 +0.4 1.9 LysR family transcriptional regulator compare
Atu4568 +0.4 1.8 ABC transporter substrate binding protein compare
Atu1864 +0.4 1.8 putative homoserine/homoserine lactone efflux protein compare
Atu3218 +0.4 2.2 hypothetical protein compare
Atu3201 +0.4 2.3 TetR family transcriptional regulator compare
Atu4214 +0.3 1.4 cold shock protein compare
Atu2335 +0.3 0.8 hypothetical protein compare
Atu3360 +0.3 1.8 amino acid ABC transporter ATPase/permease compare
Atu1358 +0.3 1.4 hypothetical protein compare
Atu6156 +0.3 1.8 virA/G regulated gene compare
Atu4613 +0.3 2.6 glycosyltransferase compare
Atu2234 +0.3 0.9 hypothetical protein compare
Atu1889 +0.3 0.9 diacylglycerol kinase compare
Atu2678 +0.3 1.9 2'-5' RNA ligase compare
Atu3853 +0.3 2.1 hypothetical protein compare
Atu3393 +0.3 1.9 pseudoazurin compare
Atu8155 +0.3 1.4 hypothetical protein compare
Atu1629 +0.3 0.7 transcriptional regulator, ArsR family compare
Atu4187 +0.3 0.7 tRNA-Met compare
Atu3663 +0.3 0.9 hypothetical protein compare
Atu3396 +0.3 2.3 ABC transporter substrate-binding protein compare
Atu0809 +0.3 0.7 hypothetical protein compare
Atu5145 +0.3 1.4 acetyltransferase compare
Atu4454 +0.3 1.4 RpiR family transcriptional regulator compare
Atu2064 +0.3 2.1 hypothetical protein compare
Atu1845 +0.3 1.0 phosphoribosylformylglycinamidine synthase I compare
Atu4711 +0.3 1.8 two component sensor kinase compare
Atu2669 +0.3 1.8 RhtB family transporter compare
Atu2158 +0.3 2.0 hypothetical protein compare
Atu8099 +0.3 1.7 hypothetical protein compare
Atu0099 +0.3 2.3 prephenate dehydratase compare
Atu2399 +0.3 1.8 hypothetical protein compare
Atu1626 +0.3 1.8 NAD dependent epimerase/dehydratase family protein compare
Atu1830 +0.3 1.0 bacterioferritin comigratory protein compare
Atu3317 +0.3 1.0 hypothetical protein compare
Atu1686 +0.3 2.6 peptidyl-prolyl cis-trans isomerse D compare
Atu0983 +0.3 1.2 hypothetical protein compare
Atu1952 +0.3 0.6 hypothetical protein compare
Atu1553 +0.3 2.1 hypothetical protein compare
Atu1637 +0.3 1.2 hypothetical protein compare
Atu3150 +0.3 1.7 sugar ABC transporter permease compare
Atu3299 +0.3 0.8 hypothetical protein compare
Atu3367 +0.3 1.9 TRAP dicarboxylate transporter subunit DctM compare
Atu2017 +0.3 0.5 hypothetical protein compare
Atu4634 +0.3 2.0 hypothetical protein compare
Atu4737 +0.3 1.1 hypothetical protein compare
Atu3577 +0.3 2.3 transcriptional regulator compare
Atu2578 +0.3 1.8 cAMP-dependent protein kinase regulatory subunit compare
Atu0889 +0.3 1.7 hypothetical protein compare
Atu8022 +0.3 1.3 hypothetical protein compare
Atu4738 +0.3 1.2 chloramphenicol acetyltransferase compare
Atu1639 +0.3 1.3 hypothetical protein compare
Atu4459 +0.3 1.4 6-O-methylguanine DNA methyltransferase compare
Atu0677 +0.3 1.0 hypothetical protein compare
Atu0953 +0.3 0.5 hypothetical protein compare
Atu0182 +0.3 1.6 transcriptional regulator, GntR family compare
Atu4702 +0.3 1.7 GntR family transcriptional regulator compare
Atu5170 +0.3 1.6 type IV secretion protein AvhB9 compare
Atu2827 +0.3 1.0 hypothetical protein compare
Atu4328 +0.3 1.0 hypothetical protein compare
Atu2368 +0.3 0.5 hypothetical protein compare
Atu1126 +0.3 1.6 molybdopterin converting factor, large subunit compare
Atu1287 +0.3 1.1 hypothetical protein compare
Atu3497 +0.3 0.9 hypothetical protein compare
Atu3044 +0.3 1.1 asparaginase compare
Atu3957 +0.3 1.7 glycine-betaine ABC transporter substrate-binding protein compare
Atu2320 +0.3 1.6 transcriptional regulator, TetR family compare
Atu3797 +0.3 2.2 HlyD family secretion protein compare
Atu1782 +0.3 0.9 hypothetical protein compare
Atu1774 +0.3 1.7 ABC transporter, substrate binding protein (peptide) compare
Atu0375 +0.3 1.1 small heat shock protein compare
Atu3460 +0.3 1.4 RhtB family transporter compare
Atu4543 +0.3 1.3 LysR family transcriptional regulator compare
Atu4706 +0.3 2.3 formate dehydrogenase subunit gamma compare
Atu2215 +0.3 1.9 hypothetical protein compare
Atu8032 +0.3 0.9 hypothetical protein compare
Atu5106 +0.3 1.3 DNA binding protein compare
Atu2236 +0.3 1.3 adenine phosphoribosyltransferase compare
Atu3693 +0.3 2.0 two component sensor kinase compare
Atu4671 +0.3 0.8 response regulator compare
Atu4437 +0.3 1.3 LysR family transcriptional regulator compare
Atu1254 +0.3 0.5 transcriptional regulator, ArsR family compare
Atu3334 +0.3 1.1 hypothetical protein compare
Atu4348 +0.3 1.6 VgrG protein compare
Atu1847 +0.3 0.8 hypothetical protein compare
Atu4787 +0.3 1.6 inositol monophosphatase compare
Atu1007 +0.3 1.3 hypothetical protein compare
Atu3243 +0.3 1.4 hypothetical protein compare
Atu4777 +0.3 2.0 hypothetical protein compare
Atu4082 +0.3 1.7 AsnC family transcriptional regulator compare


Specific Phenotypes

For 11 genes in this experiment

For stress Pyrogallol in Agrobacterium fabrum C58

For stress Pyrogallol across organisms