Experiment set11IT041 for Agrobacterium fabrum C58

Compare to:

LB with Pyrogallol 0.5 mM

200 most important genes:

  gene name fitness t score description  
Atu2585 -4.7 -7.2 hypothetical protein compare
Atu3469 -4.6 -3.2 phosphoglyceromutase compare
Atu2592 -4.2 -7.0 hypothetical protein compare
Atu2590 -4.1 -13.0 hypothetical protein compare
Atu2591 -4.1 -10.1 glucosyltransferase compare
Atu2582 -4.0 -10.4 UDP-glucose/GDP-mannose dehydrogenase compare
Atu2577 -4.0 -19.8 ABC transporter, nucleotide binding/ATPase protein compare
Atu4148 -3.8 -6.8 UDP-glucuronic acid epimerase compare
Atu2584 -3.8 -4.4 hypothetical protein compare
Atu4149 -3.7 -13.2 UDP-glucose 6-dehydrogenase compare
Atu2583 -3.6 -14.7 glycosyltransferase compare
Atu0162 -3.4 -7.3 biopolymer transport protein compare
Atu0837 -3.3 -7.2 transcriptional regulator, MarR family compare
Atu0161 -3.3 -10.7 biopolymer transport protein compare
Atu0163 -3.1 -8.0 tonB protein compare
Atu0769 -2.4 -2.3 protoheme IX farnesyltransferase compare
Atu0030 -2.3 -2.7 phosphocarrier protein HPr compare
Atu0153 -2.2 -5.8 transcriptional regulator, Fur family compare
Atu3009 -2.1 -2.2 exopolysaccharide production protein compare
Atu3688 -2.0 -6.2 iron(III ABC transporter permease dicitrate ABC transporter permease compare
Atu4317 -1.9 -2.5 TetR family transcriptional regulator compare
Atu2474 -1.6 -6.8 ABC transporter, membrane spanning protein compare
Atu0142 -1.6 -3.2 cytochrome o ubiquinol oxidase subunit II compare
Atu0040 -1.5 -1.6 phosphoribosylformino-5-aminoimidazole carboxamide ribotide isomerase compare
Atu0091 -1.5 -10.1 MFS permease compare
Atu2207 -1.5 -3.3 two component sensor kinase compare
Atu0971 -1.5 -3.9 two component sensor kinase compare
Atu2383 -1.4 -9.2 hypothetical protein compare
Atu3663 -1.4 -1.9 hypothetical protein compare
Atu2052 -1.4 -5.9 hypothetical protein compare
Atu3690 -1.4 -6.1 iron (III ABC transporter permease dicitrate ABC transporter permease compare
Atu2476 -1.3 -8.0 ABC transporter, nucleotide binding/ATPase protein compare
Atu4610 -1.3 -8.2 sugar nucleotide epimerase/dehydratase compare
Atu2473 -1.3 -7.9 ABC transporter, substrate binding protein compare
Atu2475 -1.3 -5.6 ABC transporter, membrane spanning protein compare
Atu3763 -1.3 -1.6 hypothetical protein compare
Atu8082 -1.2 -1.7 hypothetical protein compare
Atu2728 -1.2 -4.4 beta (1-->2) glucan export ATP-binding protein compare
Atu3691 -1.2 -6.5 iron (III) dicitrate ABC transporter ATPase compare
Atu3739 -1.2 -3.0 phosphoglycerate kinase compare
Atu2439 -1.2 -2.0 hypothetical protein compare
Atu0029 -1.2 -5.4 S-adenosylhomocysteine hydrolase compare
Atu4217 -1.2 -1.4 TetR family transcriptional regulator compare
Atu3687 -1.2 -8.9 TonB-dependent receptor compare
Atu3598 -1.1 -1.5 thiol:disulfide interchange protein compare
Atu3689 -1.1 -7.6 iron(III ABC transporter permease dicitrate ABC transporter permease compare
Atu1225 -1.1 -1.9 hypothetical protein compare
Atu0141 -1.1 -1.8 cytochrome O ubiquinol oxidase subunit I compare
Atu1685 -1.1 -1.2 hypothetical protein compare
Atu1810 -1.1 -1.5 hypothetical protein compare
Atu3917 -1.1 -7.6 hypothetical protein compare
Atu0601 -1.1 -5.7 oxidoreductase compare
Atu1030 -1.1 -1.5 GTP pyrophosphohydrolase/synthetase, RelA/SpoT family compare
Atu3692 -1.0 -4.7 sigma factor compare
Atu1874 -1.0 -2.4 RecA protein compare
Atu4773 -1.0 -2.3 two component response regulator compare
Atu8180 -0.9 -4.7 hypothetical protein compare
Atu0073 -0.9 -5.3 recF-like protein compare
Atu0977 -0.9 -3.2 serine protease DO-like protease compare
Atu0269 -0.9 -3.3 exodeoxyribonuclease VII large subunit compare
Atu0138 -0.9 -4.6 surfeit 1 compare
Atu4734 -0.9 -7.3 bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase compare
Atu8165 -0.9 -1.6 hypothetical protein compare
Atu2217 -0.9 -2.7 hypothetical protein compare
Atu0777 -0.9 -0.9 hypothetical protein compare
Atu0225 -0.9 -1.0 hypothetical protein compare
Atu1645 -0.9 -4.5 ABC transporter, substrate binding protein compare
Atu0566 -0.8 -1.5 hypothetical protein compare
Atu2555 -0.8 -3.0 L-lysine 2,3-aminomutase compare
Atu3727 -0.8 -2.8 hypothetical protein compare
Atu4478 -0.8 -5.3 multidrug resistance efflux pump compare
Atu3162 -0.8 -4.9 LacI family transcriptional regulator compare
Atu0031 -0.8 -1.2 PTS system, IIA component compare
Atu2551 -0.8 -6.3 RND multidrug efflux transporter compare
Atu0184 -0.8 -2.0 glucokinase compare
Atu0051 -0.8 -3.0 two component sensor kinase compare
Atu2620 -0.8 -1.2 hypothetical protein compare
Atu2554 -0.8 -1.6 lysyl-tRNA synthetase compare
Atu3744 -0.8 -5.3 ABC transporter permease compare
Atu2692 -0.8 -3.0 intracellular septation protein compare
Atu5057 -0.8 -1.1 hypothetical protein compare
Atu4527 -0.8 -1.5 hypothetical protein compare
Atu2772 -0.7 -3.2 Invasion protein A compare
Atu3400 -0.7 -1.8 hypothetical protein compare
Atu1380 -0.7 -3.7 zinc metallopeptidase compare
Atu4290 -0.7 -1.8 hypothetical protein compare
Atu2685 -0.7 -5.0 aconitate hydratase compare
Atu1694 -0.7 -1.3 hypothetical protein compare
Atu1149 -0.7 -1.0 adenylate cyclase compare
Atu8034 -0.7 -2.1 hypothetical protein compare
Atu0784 -0.7 -1.7 hypothetical protein compare
Atu8138 -0.7 -1.2 hypothetical protein compare
Atu3336 -0.7 -1.8 hypothetical protein compare
Atu2803 -0.7 -2.1 Cobalamin biosynthesis associated protein compare
Atu5125 -0.7 -2.4 GntR family transcriptional regulator compare
Atu3730 -0.7 -1.1 hypothetical protein compare
Atu3280 -0.7 -2.8 GntR family transcriptional regulator compare
Atu3012 -0.7 -1.6 hypothetical protein compare
Atu5115 -0.7 -1.7 hypothetical protein compare
Atu8019 -0.7 -2.1 hypothetical protein compare
Atu0641 -0.7 -2.3 hypothetical protein compare
Atu2633 -0.7 -1.0 RhtB family transporter compare
Atu4072 -0.7 -1.0 nodulation protein N compare
Atu0050 -0.7 -2.3 two component response regulator compare
Atu1026 -0.7 -1.5 hypothetical protein compare
Atu1678 -0.7 -3.1 S-adenosylmethionine tRNA ribosyltransferase-isomerase compare
Atu3429 -0.7 -1.0 hypothetical protein compare
Atu1163 -0.7 -1.0 exopolysaccharide II synthesis transcriptional activator ExpG compare
Atu4099 -0.6 -2.9 hypothetical protein compare
Atu1526 -0.6 -3.6 6-phosphogluconate dehydrogenase, decarboxylating compare
Atu4077 -0.6 -3.8 glycogen branching protein compare
Atu4161 -0.6 -1.3 hypothetical protein compare
Atu3515 -0.6 -1.9 hypothetical protein compare
Atu1129 -0.6 -2.8 excinuclease ABC chain C compare
Atu8096 -0.6 -1.5 hypothetical protein compare
Atu2550 -0.6 -5.1 RND multidrug efflux membrane permease compare
Atu2648 -0.6 -1.8 hypothetical protein compare
Atu4479 -0.6 -5.1 MFS permease compare
Atu3608 -0.6 -2.6 hypothetical protein compare
Atu5035 -0.6 -2.5 hypothetical protein compare
Atu2532 -0.6 -1.9 transcriptional regulator, MarR family compare
Atu3342 -0.6 -3.4 trehalose utilization-like protein compare
Atu1742 -0.6 -2.2 hypothetical protein compare
Atu2073 -0.6 -2.6 membrane protein compare
Atu8168 -0.6 -1.8 hypothetical protein compare
Atu3014 -0.6 -1.2 hypothetical protein compare
Atu3916 -0.6 -4.8 exogenous ferric siderophore receptor compare
Atu3699 -0.6 -3.3 hypothetical protein compare
Atu3386 -0.6 -3.5 two component sensor kinase compare
Atu0533 -0.6 -0.9 putative inhibitor of septum formation compare
Atu1779 -0.6 -1.3 hypothetical protein compare
Atu4040 -0.6 -1.4 hypothetical protein compare
Atu8020 -0.6 -2.3 hypothetical protein compare
Atu6009 -0.6 -1.8 indole-3-lactate synthase compare
Atu4469 -0.6 -1.0 iron ABC transporter permease compare
Atu0768 -0.6 -4.7 cytochrome-c oxidase chain I compare
Atu1804 -0.6 -2.6 hypothetical protein compare
Atu0701 -0.6 -3.7 GGDEF family protein compare
Atu1321 -0.6 -2.2 hypothetical protein compare
Atu0838 -0.6 -4.6 MFS permease compare
Atu1359 -0.6 -0.6 dnaK deletion suppressor protein compare
Atu1423 -0.6 -2.5 hypothetical protein compare
Atu8202 -0.6 -2.4 hypothetical protein compare
Atu3486 -0.5 -1.5 DeoR family transcriptional regulator compare
Atu1339 -0.5 -1.3 ribonuclease E compare
Atu0419 -0.5 -0.8 two component sensor kinase compare
Atu2454 -0.5 -3.7 iron-chelator utilization protein compare
Atu5429 -0.5 -3.0 transcriptional regulator compare
Atu0630 -0.5 -1.1 hypothetical protein compare
Atu1559 -0.5 -0.9 hypothetical protein compare
Atu2396 -0.5 -2.1 urease accessory protein compare
Atu0354 -0.5 -1.0 ferric uptake regulator compare
Atu3264 -0.5 -2.3 IclR family transcriptional regulator compare
Atu1683 -0.5 -1.4 hypothetical protein compare
Atu1805 -0.5 -2.8 hypothetical protein compare
Atu2045 -0.5 -1.9 HFLK protein compare
Atu3023 -0.5 -3.3 sugar ABC transporter permease compare
Atu2083 -0.5 -1.1 DNA repair protein RecN compare
Atu1803 -0.5 -2.6 cold shock protein compare
Atu8117 -0.5 -1.0 hypothetical protein compare
Atu2800 -0.5 -1.5 precorrin-3B C17-methyltransferase compare
Atu0604 -0.5 -1.7 hypothetical protein compare
Atu1750 -0.5 -2.5 phosphoribosyl c-AMP cyclohydrolase compare
Atu1469 -0.5 -1.4 hypothetical protein compare
Atu4139 -0.5 -1.4 hypothetical protein compare
Atu4428 -0.5 -2.4 amidohydrolase compare
Atu5104 -0.5 -2.9 hypothetical protein compare
Atu1646 -0.5 -2.1 ABC transporter, nucleotide binding/ATPase protein compare
Atu3698 -0.5 -1.8 thioredoxin compare
Atu0206 -0.5 -1.1 hypothetical protein compare
Atu4879 -0.5 -2.7 hypothetical protein compare
Atu3912 -0.5 -2.8 hypothetical protein compare
Atu4449 -0.5 -2.0 sorbitol/mannitol ABC transporter permease compare
Atu8177 -0.5 -1.5 hypothetical protein compare
Atu3686 -0.5 -2.8 siderophore biosynthesis protein compare
Atu8166 -0.5 -1.4 hypothetical protein compare
Atu3669 -0.5 -2.8 siderophore biosynthesis protein compare
Atu1032 -0.5 -2.1 hypothetical protein compare
Atu1513 -0.5 -2.1 ABC excinuclease subunit A compare
Atu4159 -0.5 -1.8 AsnC family transcriptional regulator compare
Atu3496 -0.5 -1.6 hypothetical protein compare
Atu3685 -0.5 -2.4 thioesterase, siderophore biosynthesis protein compare
Atu3427 -0.5 -1.3 hypothetical protein compare
Atu0525 -0.5 -1.7 transcriptional regulator, LuxR family compare
Atu0912 -0.5 -0.6 Na+/H+ antiporter compare
Atu1680 -0.5 -2.0 peptidyl prolyl cis-trans isomerase compare
Atu1242 -0.5 -2.3 cytochrome oxidase assembly factor compare
Atu2831 -0.5 -2.4 glucose inhibited division protein A compare
Atu6153 -0.4 -1.7 conserved hypothetical protein compare
Atu0943 -0.4 -0.8 hypothetical protein compare
Atu8041 -0.4 -1.1 hypothetical protein compare
Atu3532 -0.4 -1.8 GntR family transcriptional regulator compare
Atu1729 -0.4 -2.0 putative molybdenum cofactor biosynthesis protein compare
Atu3634 -0.4 -1.5 penicillin-binding protein dacf precursor compare
Atu1793 -0.4 -3.0 phosphatidylcholine synthase compare
Atu2091 -0.4 -2.3 GGDEF family protein compare
Atu1005 -0.4 -1.5 hypothetical protein compare
Atu2148 -0.4 -2.3 ABC transporter, membrane spanning protein compare
Atu4443 -0.4 -2.2 hypothetical protein compare
Atu0049 -0.4 -1.9 hypothetical protein compare


Specific Phenotypes

For 12 genes in this experiment

For stress Pyrogallol in Agrobacterium fabrum C58

For stress Pyrogallol across organisms