Experiment set11IT036 for Agrobacterium fabrum C58

Compare to:

LB with syringaldehyde 1.25 mM

200 most detrimental genes:

  gene name fitness t score description  
Atu1952 +1.0 2.8 hypothetical protein compare
Atu4897 +1.0 1.5 hypothetical protein compare
Atu8161 +1.0 2.7 hypothetical protein compare
Atu2067 +0.9 1.3 hypothetical protein compare
Atu3120 +0.8 1.4 hypothetical protein compare
Atu5468 +0.8 1.7 hypothetical protein compare
Atu1182 +0.7 2.0 hypothetical protein compare
Atu2484 +0.7 2.0 hypothetical protein compare
Atu2017 +0.7 1.1 hypothetical protein compare
Atu5430 +0.7 1.6 hypothetical protein compare
Atu0152 +0.7 1.4 hypothetical protein compare
Atu0026 +0.7 0.9 hypothetical protein compare
Atu0842 +0.6 2.1 hypothetical protein compare
Atu1503 +0.6 1.3 hypothetical protein compare
Atu5517 +0.6 2.7 hypothetical protein compare
Atu5130 +0.6 2.9 attachment protein compare
Atu4166 +0.6 1.8 UDP-glucose 4-epimerase compare
Atu4743 +0.6 2.8 LacI family transcriptional regulator compare
Atu4199 +0.5 4.1 TetR family transcriptional regulator compare
Atu1213 +0.5 1.7 hypothetical protein compare
Atu1203 +0.5 1.5 hypothetical protein compare
Atu4614 +0.5 2.9 glycosyltransferase compare
Atu2163 +0.5 0.6 hypothetical protein compare
Atu1475 +0.5 2.2 hypothetical protein compare
Atu6112 +0.5 2.3 conserved hypothetical protein compare
Atu1573 +0.5 0.9 hypothetical protein compare
Atu5057 +0.5 2.1 hypothetical protein compare
Atu2472 +0.5 1.4 hypothetical protein compare
Atu3619 +0.5 1.6 hypothetical protein compare
Atu5173 +0.5 1.9 dehydrogenase compare
Atu1608 +0.5 2.4 hypothetical protein compare
Atu0681 +0.5 2.1 hypothetical protein compare
Atu1830 +0.5 1.8 bacterioferritin comigratory protein compare
Atu4838 +0.5 2.3 outer membrane lipoprotein compare
Atu4609 +0.5 3.7 glycosyltransferase compare
Atu2063 +0.5 1.4 hypothetical protein compare
Atu0948 +0.4 1.7 hypothetical protein compare
Atu0585 +0.4 1.0 hypothetical protein compare
Atu4617 +0.4 3.2 dTDP-D-glucose-4,6-dehydratase compare
Atu2489 +0.4 2.8 hypothetical protein compare
Atu1688 +0.4 2.2 indole-3-glycerol-phosphate synthase compare
Atu1844 +0.4 1.5 Phosphoribosylformylglycinamidine synthetase compare
Atu4615 +0.4 2.8 glucose-1-phosphate thymidylyltransferase compare
Atu0041 +0.4 0.9 glutamine amidotransferase compare
Atu1427 +0.4 1.6 hypothetical protein compare
Atu3634 +0.4 1.9 penicillin-binding protein dacf precursor compare
Atu1884 +0.4 1.7 ABC transporter, substrate binding protein (aliphatic sulfonate) compare
Atu3031 +0.4 0.8 hypothetical protein compare
Atu4607 +0.4 2.8 sugar acetylase compare
Atu1302 +0.4 1.2 hypothetical protein compare
Atu3075 +0.4 1.9 TetR family transcriptional regulator compare
Atu1896 +0.4 1.9 hypothetical protein compare
Atu5443 +0.4 2.8 TetR family transcriptional regulator compare
Atu0926 +0.4 1.6 hypothetical protein compare
Atu1301 +0.4 1.5 hypothetical protein compare
Atu3775 +0.4 1.0 hypothetical protein compare
Atu2379 +0.4 2.5 phosphomannomutase compare
Atu0107 +0.4 1.3 hypothetical protein compare
Atu1908 +0.4 2.3 hypothetical protein compare
Atu4769 +0.4 1.9 hypothetical protein compare
Atu0931 +0.4 3.0 penicillin binding protein compare
Atu3886 +0.4 3.1 lysophospholipase compare
Atu8169 +0.4 2.2 hypothetical protein compare
Atu2380 +0.4 1.3 hypothetical protein compare
Atu1750 +0.4 2.2 phosphoribosyl c-AMP cyclohydrolase compare
Atu3773 +0.4 1.4 hypothetical protein compare
Atu1725 +0.4 1.8 hypothetical protein compare
Atu4499 +0.4 1.6 hypothetical protein compare
Atu2064 +0.4 2.5 hypothetical protein compare
Atu6138 +0.4 2.3 Repressor of the acc and arc operons compare
Atu0671 +0.4 1.8 hypothetical protein compare
Atu4669 +0.4 2.4 hypothetical protein compare
Atu3215 +0.3 1.6 oligopeptide ABC transporter ATPase compare
Atu2201 +0.3 1.2 hydrolase compare
Atu5115 +0.3 0.6 hypothetical protein compare
Atu2235 +0.3 1.1 hypothetical protein compare
Atu0382 +0.3 0.9 hypothetical protein compare
Atu4608 +0.3 2.8 hypothetical protein compare
Atu1225 +0.3 0.9 hypothetical protein compare
Atu3887 +0.3 1.1 small heat shock protein compare
Atu4406 +0.3 1.4 periplasmic nitrate reductase, ferredoxin-like protein compare
Atu5107 +0.3 1.0 hypothetical protein compare
Atu2368 +0.3 0.8 hypothetical protein compare
Atu1160 +0.3 1.7 hypothetical protein compare
Atu4557 +0.3 1.8 sugar ABC transporter permease compare
Atu4328 +0.3 1.3 hypothetical protein compare
Atu0188 +0.3 1.4 ABC transporter, membrane spanning protein (peptide) compare
Atu8153 +0.3 1.8 hypothetical protein compare
Atu4486 +0.3 1.5 nitroreductase compare
Atu0479 +0.3 2.4 ABC transporter, substrate binding protein (amino acid) compare
Atu0124 +0.3 1.9 hypothetical protein compare
Atu5469 +0.3 2.4 DNA polymerase IV compare
Atu3068 +0.3 2.5 ribokinase compare
Atu1889 +0.3 1.0 diacylglycerol kinase compare
Atu6173 +0.3 1.9 component of type IV secretion system compare
Atu5540 +0.3 0.5 hypothetical protein compare
Atu1252 +0.3 1.1 hypothetical protein compare
Atu2491 +0.3 1.5 hypothetical protein compare
Atu2183 +0.3 2.1 lipopolysaccharide core biosynthesis mannosyltransferase compare
Atu4454 +0.3 1.5 RpiR family transcriptional regulator compare
Atu0968 +0.3 2.2 hypothetical protein compare
Atu2671 +0.3 1.9 ABC transporter, membrane spanning protein compare
Atu4677 +0.3 0.5 hypothetical protein compare
Atu0303 +0.3 1.7 hypothetical protein compare
Atu3561 +0.3 1.2 hypothetical protein compare
Atu0346 +0.3 0.5 uridylyltransferase/uridylyl-removing enzyme UTase compare
Atu0240 +0.3 1.1 hypothetical protein compare
Atu3067 +0.3 1.9 hypothetical protein compare
Atu0105 +0.3 0.8 hypothetical protein compare
Atu8166 +0.3 1.7 hypothetical protein compare
Atu5186 +0.3 1.3 hypothetical protein compare
Atu3428 +0.3 1.8 hypothetical protein compare
Atu0795 +0.3 0.8 hypothetical protein compare
Atu3126 +0.3 1.0 hypothetical protein compare
Atu3009 +0.3 0.5 exopolysaccharide production protein compare
Atu6030 +0.3 1.9 ORF13 hypothetical protein compare
Atu3092 +0.3 2.2 hypothetical protein compare
Atu1967 +0.3 1.5 hypothetical protein compare
Atu4766 +0.3 1.0 hypothetical protein compare
Atu2375 +0.3 2.0 UDP-hexose transferase compare
Atu8039 +0.3 1.0 hypothetical protein compare
Atu1001 +0.3 1.7 hypothetical protein compare
Atu8191 +0.3 0.7 hypothetical protein compare
Atu0922 +0.3 1.5 hypothetical protein compare
Atu1236 +0.3 2.0 polysaccharide biosynthesis glycosyltransferase compare
Atu2432 +0.3 0.9 hypothetical protein compare
Atu3780 +0.3 1.6 hypothetical protein compare
Atu1387 +0.3 1.4 transcriptional regulator, GntR family compare
Atu1536 +0.3 1.3 cytochrome C oxidase, FixO chain compare
Atu1550 +0.3 1.4 polypeptide deformylase compare
Atu3460 +0.3 1.3 RhtB family transporter compare
Atu0181 +0.3 1.4 hypothetical protein compare
Atu8158 +0.3 1.3 hypothetical protein compare
Atu0190 +0.3 1.8 ABC transporter, nucleotide binding/ATPase protein (peptide) compare
Atu2324 +0.3 1.4 ureidoglycolate hydrolase compare
Atu1694 +0.3 0.9 hypothetical protein compare
Atu2276 +0.3 1.7 ABC transporter, substrate binding protein (branched chain amino acid) compare
Atu2633 +0.3 1.0 RhtB family transporter compare
Atu8054 +0.3 0.5 hypothetical protein compare
Atu2399 +0.3 1.8 hypothetical protein compare
Atu1883 +0.3 1.6 hypothetical protein compare
Atu2294 +0.3 1.1 aminoglycoside N6'-acetyltransferase compare
Atu4472 +0.3 1.3 hypothetical protein compare
Atu0477 +0.3 0.7 hypothetical protein compare
Atu2191 +0.3 1.1 transcriptional regulator, LysR family compare
Atu8088 +0.3 0.7 hypothetical protein compare
Atu4117 +0.3 1.4 dipeptide ABC transporter ATPase compare
Atu1637 +0.3 1.2 hypothetical protein compare
Atu4179 +0.3 1.5 hypothetical protein compare
Atu2221 +0.3 1.1 Lipid A biosynthesis protein compare
Atu1872 +0.3 1.6 hypothetical protein compare
Atu5207 +0.3 1.4 hypothetical protein compare
Atu0563 +0.3 2.2 flagellar motor switch protein FliG compare
Atu0536 +0.3 1.6 hypothetical protein compare
Atu0636 +0.3 1.7 hypothetical protein compare
Atu3654 +0.3 2.2 hypothetical protein compare
Atu5171 +0.3 1.7 type IV secretion protein AvhB10 compare
Atu0604 +0.3 1.0 hypothetical protein compare
Atu4787 +0.3 1.3 inositol monophosphatase compare
Atu3415 +0.3 1.6 ABC transporter substrate binding protein compare
Atu4124 +0.3 1.5 branched chain amino acid ABC transporter ATPase compare
Atu1325 +0.3 1.0 acetyltransferase compare
Atu0573 +0.3 1.7 transcriptional regulator compare
Atu3763 +0.3 0.5 hypothetical protein compare
Atu4850 +0.3 1.8 hypothetical protein compare
Atu4407 +0.3 0.6 periplasmic nitrate reductase, NapD protein compare
Atu1510 +0.3 1.5 hypothetical protein compare
Atu3311 +0.3 2.3 phosphomannose isomerase compare
Atu3085 +0.3 1.6 hydantoin racemase compare
Atu8112 +0.3 2.0 hypothetical protein compare
Atu1399 +0.3 0.9 ABC transporter, substrate binding protein (amino acid) compare
Atu4820 +0.3 1.7 hypothetical protein compare
Atu1551 +0.3 1.6 hypothetical protein compare
Atu4613 +0.3 2.2 glycosyltransferase compare
Atu1840 +0.3 1.8 hypothetical protein compare
Atu4535 +0.3 1.4 amino acid ABC transporter substrate-binding protein compare
Atu4796 +0.3 2.1 hypothetical protein compare
Atu4705 +0.3 1.6 LysR family transcriptional regulator compare
Atu1634 +0.3 0.4 hypothetical protein compare
Atu0195 +0.3 1.6 gluconokinase compare
Atu4452 +0.3 1.4 hypothetical protein compare
Atu3461 +0.3 0.7 GntR family transcriptional regulator compare
Atu3044 +0.3 1.4 asparaginase compare
Atu4618 +0.3 1.9 dTDP-rhamnose-3,5-epimerase compare
Atu3183 +0.3 0.4 hypothetical protein compare
Atu1466 +0.3 0.5 hypothetical protein compare
Atu4840 +0.3 1.0 hypothetical protein compare
Atu8053 +0.3 1.2 hypothetical protein compare
Atu4831 +0.3 1.6 hypothetical protein compare
Atu1570 +0.3 0.4 hypothetical protein compare
Atu1724 +0.3 1.2 hypothetical protein compare
Atu1997 +0.3 1.6 sulfite reductase compare
Atu0232 +0.3 1.4 hypothetical protein compare
Atu1692 +0.3 0.6 hypothetical protein compare
Atu3313 +0.3 1.1 hypothetical protein compare
Atu0827 +0.3 1.5 hypothetical protein compare
Atu1113 +0.3 1.5 dehydrogenase compare
Atu3537 +0.3 1.2 hypothetical protein compare
Atu1835 +0.3 1.5 hypothetical protein compare
Atu3049 +0.3 2.0 oligopeptide ABC transporter substrate-binding protein compare


Specific Phenotypes

For 2 genes in this experiment

For stress syringaldehyde in Agrobacterium fabrum C58

For stress syringaldehyde across organisms