Experiment set11IT034 for Agrobacterium fabrum C58

Compare to:

LB with Acetosyringone 1.25 mM

200 most important genes:

  gene name fitness t score description  
Atu1446 -2.4 -3.6 two component response regulator compare
Atu3469 -2.4 -4.1 phosphoglyceromutase compare
Atu2306 -2.2 -9.9 methionine aminopeptidase compare
Atu2439 -1.9 -2.0 hypothetical protein compare
Atu1327 -1.8 -3.1 NADH-ubiquinone oxidoreductase compare
Atu3755 -1.8 -5.4 phosphoribosylaminoimidazole carboxylase ATPase subunit compare
Atu2584 -1.7 -6.3 hypothetical protein compare
Atu1308 -1.7 -5.9 aspartate carbamoyl transferase catalytic subunit compare
Atu4148 -1.7 -5.7 UDP-glucuronic acid epimerase compare
Atu0784 -1.6 -4.1 hypothetical protein compare
Atu6131 -1.6 -9.4 TraR Antiactivator compare
Atu2585 -1.6 -6.6 hypothetical protein compare
Atu2591 -1.6 -7.8 glucosyltransferase compare
Atu2590 -1.6 -9.6 hypothetical protein compare
Atu2207 -1.6 -2.7 two component sensor kinase compare
Atu0030 -1.6 -2.4 phosphocarrier protein HPr compare
Atu0769 -1.5 -2.0 protoheme IX farnesyltransferase compare
Atu2692 -1.5 -4.9 intracellular septation protein compare
Atu0399 -1.5 -4.6 dihydroorotase compare
Atu3754 -1.5 -6.9 phosphoribosylaminoimidazole carboxylase catalytic subunit compare
Atu4149 -1.5 -7.8 UDP-glucose 6-dehydrogenase compare
Atu1850 -1.5 -2.7 phosphoribosylformylglycinamidine synthetase II compare
Atu1844 -1.5 -3.5 Phosphoribosylformylglycinamidine synthetase compare
Atu1333 -1.5 -2.6 outer membrane protein compare
Atu0361 -1.5 -3.4 transcriptional regulator compare
Atu1141 -1.5 -7.2 Phosphoribosylglycinamide synthetase compare
Atu2824 -1.5 -4.5 hypothetical protein compare
Atu1470 -1.4 -1.8 Camphor resistance protein compare
Atu8095 -1.4 -6.7 hypothetical protein compare
Atu1359 -1.4 -1.5 dnaK deletion suppressor protein compare
Atu2577 -1.4 -10.9 ABC transporter, nucleotide binding/ATPase protein compare
Atu2582 -1.4 -5.8 UDP-glucose/GDP-mannose dehydrogenase compare
Atu1110 -1.4 -3.7 cytosol aminopeptidase compare
Atu2052 -1.4 -6.9 hypothetical protein compare
Atu4882 -1.4 -2.9 hypothetical protein compare
Atu2583 -1.4 -8.0 glycosyltransferase compare
Atu1075 -1.3 -6.2 amidophosphoribosyltransferase compare
Atu1140 -1.3 -2.9 phosphoribosyalaminoimidazole-succinocarboxamide synthase compare
Atu2592 -1.3 -5.1 hypothetical protein compare
Atu0971 -1.3 -3.2 two component sensor kinase compare
Atu1739 -1.3 -4.4 permease compare
Atu1030 -1.2 -1.2 GTP pyrophosphohydrolase/synthetase, RelA/SpoT family compare
Atu0298 -1.2 -5.6 orotidine 5 compare
Atu8087 -1.2 -1.2 putative peptidoglycan binding protein compare
Atu0400 -1.1 -3.4 orotate phosphoribosyltransferase compare
Atu4616 -1.1 -1.4 dTDP-4-dehydrorhamnose reductase compare
Atu2125 -1.1 -1.9 ABC transporter, nucleotide binding/ATPase protein compare
Atu0331 -1.1 -3.1 sigma-54 modulation protein compare
Atu0647 -1.1 -5.5 phosphoribosylamine--glycine ligase compare
Atu0422 -1.1 -2.4 ABC transporter, membrane spanning protein compare
Atu1163 -1.1 -2.5 exopolysaccharide II synthesis transcriptional activator ExpG compare
Atu1307 -1.1 -3.6 dihydroorotase compare
Atu0977 -1.1 -3.4 serine protease DO-like protease compare
Atu3519 -1.1 -6.0 peptidyl-prolyl cis-trans isomerase compare
Atu1683 -1.1 -2.8 hypothetical protein compare
Atu0025 -1.1 -2.1 hypothetical protein compare
Atu0941 -1.0 -1.2 hypothetical protein compare
Atu0486 -1.0 -4.0 dihydroorotate dehydrogenase compare
Atu0031 -1.0 -1.5 PTS system, IIA component compare
Atu3730 -1.0 -1.3 hypothetical protein compare
Atu1838 -0.9 -3.8 ABC transporter, substrate binding protein (amino acid) compare
Atu1845 -0.9 -2.4 phosphoribosylformylglycinamidine synthase I compare
Atu2073 -0.9 -3.6 membrane protein compare
Atu2728 -0.9 -3.4 beta (1-->2) glucan export ATP-binding protein compare
Atu1364 -0.9 -3.8 ATP-dependent Clp protease, ATP-binding subunit compare
Atu0119 -0.9 -1.3 hypothetical protein compare
Atu2044 -0.9 -3.4 HFLC protein compare
Atu0533 -0.9 -2.1 putative inhibitor of septum formation compare
Atu0689 -0.9 -5.7 ribosomal large subunit pseudouridine synthase B compare
Atu3492 -0.8 -2.3 sugar kinase compare
Atu3121 -0.8 -1.4 cold shock protein compare
Atu2017 -0.8 -1.0 hypothetical protein compare
Atu0812 -0.8 -2.4 hypothetical protein compare
Atu4077 -0.8 -5.8 glycogen branching protein compare
Atu2045 -0.8 -5.1 HFLK protein compare
Atu3887 -0.8 -3.2 small heat shock protein compare
Atu4470 -0.8 -4.6 iron ABC transporter ATPase compare
Atu8138 -0.8 -1.5 hypothetical protein compare
Atu0837 -0.8 -4.2 transcriptional regulator, MarR family compare
Atu0780 -0.8 -4.8 hypothetical protein compare
Atu3023 -0.8 -4.9 sugar ABC transporter permease compare
Atu4144 -0.8 -1.1 hypothetical protein compare
Atu4610 -0.8 -5.2 sugar nucleotide epimerase/dehydratase compare
Atu0142 -0.8 -2.6 cytochrome o ubiquinol oxidase subunit II compare
Atu6114 -0.8 -2.5 hypothetical protein compare
Atu3663 -0.8 -0.8 hypothetical protein compare
Atu1241 -0.8 -2.5 hypothetical protein compare
Atu4468 -0.8 -4.9 iron transport ABC transporter permease compare
Atu1103 -0.7 -2.2 rRNA-adenine N6,N6-dimethyltransferase compare
Atu1062 -0.7 -1.6 phosphatidylserine synthase compare
Atu3429 -0.7 -1.3 hypothetical protein compare
Atu0999 -0.7 -3.5 magnesium transport protein compare
Atu2237 -0.7 -2.5 cytochrome c1 compare
Atu4217 -0.7 -1.4 TetR family transcriptional regulator compare
Atu0895 -0.7 -1.6 ABC transporter, substrate binding protein compare
Atu4527 -0.7 -1.5 hypothetical protein compare
Atu3598 -0.7 -1.1 thiol:disulfide interchange protein compare
Atu0925 -0.7 -1.6 hypothetical protein compare
Atu1204 -0.7 -4.1 potassium uptake protein compare
Atu3448 -0.7 -3.9 dibenzothiophene desulfurization protein B compare
Atu5010 -0.7 -1.9 hypothetical protein compare
Atu0598 -0.7 -4.5 phosphogluconate dehydratase compare
Atu4541 -0.7 -3.3 carboxymuconolactone decarboxylase compare
Atu0923 -0.7 -2.9 hypothetical protein compare
Atu4890 -0.7 -1.5 IS426 transposase compare
Atu1099 -0.6 -3.1 hypothetical protein compare
Atu4187 -0.6 -1.0 tRNA-Met compare
Atu4317 -0.6 -1.5 TetR family transcriptional regulator compare
Atu3486 -0.6 -2.0 DeoR family transcriptional regulator compare
Atu2787 -0.6 -1.0 hypothetical protein compare
Atu2406 -0.6 -1.6 hypothetical protein compare
Atu8202 -0.6 -2.0 hypothetical protein compare
Atu0115 -0.6 -0.9 hypothetical protein compare
Atu3468 -0.6 -0.7 hypothetical protein compare
Atu1019 -0.6 -2.1 hypothetical protein compare
Atu8194 -0.6 -1.5 hypothetical protein compare
Atu8093 -0.6 -2.7 hypothetical protein compare
Atu1779 -0.6 -1.6 hypothetical protein compare
Atu8167 -0.6 -4.0 putative transmembrane protein compare
Atu1902 -0.6 -3.4 transketolase compare
Atu2773 -0.6 -2.1 hypothetical protein compare
Atu0051 -0.6 -2.9 two component sensor kinase compare
Atu4877 -0.6 -3.9 short-chain dehydrogenase compare
Atu2640 -0.6 -2.3 hypothetical protein compare
Atu0836 -0.6 -1.7 Glutathione-S-transferase compare
Atu3516 -0.6 -2.7 MutT family NTP pyrophosphatase compare
Atu4879 -0.6 -3.1 hypothetical protein compare
Atu1373 -0.6 -3.1 hypothetical protein compare
Atu3518 -0.6 -3.6 bifunctional ornithine acetyltransferase/N-acetylglutamate synthase compare
Atu4884 -0.6 -2.3 hypothetical protein compare
Atu3009 -0.6 -0.9 exopolysaccharide production protein compare
Atu2800 -0.6 -2.4 precorrin-3B C17-methyltransferase compare
Atu0017 -0.6 -1.8 N-(5-phosphoribosyl) anthranilate isomerase compare
Atu0771 -0.6 -2.8 cytochrome c oxidase subunit III compare
Atu0566 -0.5 -0.7 hypothetical protein compare
Atu1449 -0.5 -3.7 potassium uptake protein compare
Atu1176 -0.5 -1.9 hypothetical protein compare
Atu3013 -0.5 -2.1 hypothetical protein compare
Atu8159 -0.5 -1.2 hypothetical protein compare
Atu3018 -0.5 -2.1 hypothetical protein compare
Atu4469 -0.5 -1.6 iron ABC transporter permease compare
Atu0604 -0.5 -2.4 hypothetical protein compare
Atu3019 -0.5 -2.8 hypothetical protein compare
Atu3727 -0.5 -1.9 hypothetical protein compare
Atu4887 -0.5 -2.0 hypothetical protein compare
Atu2034 -0.5 -2.1 transcriptional regulator, ArsR family compare
Atu0678 -0.5 -2.6 histidyl-tRNA synthetase compare
Atu2080 -0.5 -3.1 acetyltransferase compare
Atu1804 -0.5 -2.2 hypothetical protein compare
Atu3763 -0.5 -0.8 hypothetical protein compare
Atu1511 -0.5 -1.6 hypothetical protein compare
Atu3517 -0.5 -2.7 acetyltransferase compare
Atu4875 -0.5 -2.9 hypothetical protein compare
Atu1674 -0.5 -2.7 hypothetical protein compare
Atu3911 -0.5 -2.5 hypothetical protein compare
Atu1880 -0.5 -1.9 ABC transporter, membrane spanning protein (amino acid) compare
Atu4876 -0.5 -3.6 oxidoreductase compare
Atu4872 -0.5 -3.7 LysR family transcriptional regulator compare
Atu2682 -0.5 -1.7 hypothetical protein compare
Atu3624 -0.5 -2.1 stress induced morphogen compare
Atu8144 -0.5 -1.6 hypothetical protein compare
Atu4749 -0.5 -2.1 fructose transport system kinase compare
Atu0153 -0.5 -2.5 transcriptional regulator, Fur family compare
Atu0926 -0.5 -1.8 hypothetical protein compare
Atu0328 -0.5 -3.0 heat-inducible transcription repressor compare
Atu3739 -0.5 -1.2 phosphoglycerate kinase compare
Atu0013 -0.5 -3.2 NAD(P)H-flavin oxidoreductase compare
Atu2204 -0.5 -1.2 hypothetical protein compare
Atu4538 -0.5 -3.4 3-carboxy-cis,cis-muconate cycloisomerase compare
Atu3864 -0.5 -2.0 hypothetical protein compare
Atu2304 -0.5 -3.3 bacteroid development protein compare
Atu3608 -0.5 -2.3 hypothetical protein compare
Atu0280 -0.5 -1.0 hypothetical protein compare
Atu3028 -0.5 -3.3 hypothetical protein compare
Atu0894 -0.5 -1.1 ABC transporter, membrane spanning protein compare
Atu0050 -0.5 -1.9 two component response regulator compare
Atu2404 -0.5 -2.3 hypothetical protein compare
Atu0577 -0.5 -2.0 FLAF protein compare
Atu0904 -0.5 -1.8 hypothetical protein compare
Atu0601 -0.5 -2.8 oxidoreductase compare
Atu3579 -0.5 -1.6 lactoylglutathione lyase compare
Atu1286 -0.5 -2.4 hypothetical protein compare
Atu1714 -0.4 -0.9 exonuclease III compare
Atu2684 -0.4 -1.0 hypothetical protein compare
Atu1803 -0.4 -2.1 cold shock protein compare
Atu4873 -0.4 -2.8 TetR family transcriptional regulator compare
Atu0630 -0.4 -1.3 hypothetical protein compare
Atu2676 -0.4 -1.8 4a-hydroxytetrahydrobiopterin dehydratase compare
Atu1759 -0.4 -3.0 L-serine dehydratase compare
Atu1742 -0.4 -2.2 hypothetical protein compare
Atu1619 -0.4 -1.0 protein-export membrane protein SECG compare
Atu3016 -0.4 -2.4 phosphoglyceromutase compare
Atu1513 -0.4 -1.8 ABC excinuclease subunit A compare
Atu1354 -0.4 -0.8 6-hydroxymethyl-7,8-dihydropterin pyrophosphokinase compare
Atu3022 -0.4 -3.2 sugar ABC transporter permease compare
Atu5160 -0.4 -1.7 transcriptional regulator protein compare
Atu3813 -0.4 -1.7 3-oxoacyl-ACP reductase compare
Atu4040 -0.4 -1.8 hypothetical protein compare
Atu0773 -0.4 -2.3 surfeit 1 compare
Atu3025 -0.4 -3.5 oligo alginate lyase compare


Specific Phenotypes

For 1 genes in this experiment

For stress Acetosyringone in Agrobacterium fabrum C58

For stress Acetosyringone across organisms