Experiment set11IT032 for Agrobacterium fabrum C58

Compare to:

LB with Acetosyringone 5 mM

200 most detrimental genes:

  gene name fitness t score description  
Atu0502 +1.5 8.4 acetyl-CoA acetyltransferase compare
Atu0503 +1.4 12.1 enoyl-CoA hydratase compare
Atu2017 +1.0 1.9 hypothetical protein compare
Atu0026 +1.0 1.4 hypothetical protein compare
Atu0795 +0.9 2.0 hypothetical protein compare
Atu1208 +0.9 6.1 acyl-carrier-protein phosphodiesterase compare
Atu0401 +0.9 2.5 fructokinase compare
Atu0413 +0.8 2.9 stress induced protein compare
Atu0043 +0.8 2.9 imidazoleglycerol-phosphate dehydratase compare
Atu3005 +0.8 1.2 hypothetical protein compare
Atu2368 +0.8 1.9 hypothetical protein compare
Atu3466 +0.8 2.3 ArsR family transcriptional regulator compare
Atu0085 +0.7 3.5 tRNA pseudouridine 55 synthase compare
Atu0883 +0.7 1.9 hypothetical protein compare
Atu3465 +0.7 2.8 metallo-beta-lactamase superfamily protein compare
Atu0368 +0.7 4.4 tRNA pseudouridine synthase I compare
Atu1793 +0.7 5.3 phosphatidylcholine synthase compare
Atu5164 +0.7 1.4 type IV secretion protein AvhB3 compare
Atu0953 +0.7 1.2 hypothetical protein compare
Atu3120 +0.7 1.4 hypothetical protein compare
Atu1810 +0.7 1.2 hypothetical protein compare
Atu0201 +0.7 1.1 hypothetical protein compare
Atu3609 +0.7 3.7 1-acyl-sn-glycerol-3-phosphate acyltransferase compare
Atu4187 +0.7 1.4 tRNA-Met compare
Atu1892 +0.7 2.4 hypothetical protein compare
Atu6164 +0.7 5.4 trans-zeatin secretion protein compare
Atu4896 +0.6 1.4 acetyltransferase compare
Atu1896 +0.6 3.1 hypothetical protein compare
Atu1127 +0.6 1.9 molybdopterin converting factor small subunit compare
Atu1868 +0.6 3.4 tRNA/rRNA methyltransferase compare
Atu1149 +0.6 1.5 adenylate cyclase compare
Atu4607 +0.6 4.6 sugar acetylase compare
Atu3613 +0.6 3.0 hypothetical protein compare
Atu2201 +0.6 1.5 hydrolase compare
Atu1725 +0.6 1.7 hypothetical protein compare
Atu1970 +0.6 2.2 hypothetical protein compare
Atu4166 +0.6 1.2 UDP-glucose 4-epimerase compare
Atu1038 +0.6 2.7 two component response regulator compare
Atu0280 +0.6 1.4 hypothetical protein compare
Atu2193 +0.6 0.9 hypothetical protein compare
Atu5451 +0.6 1.0 hypothetical protein compare
Atu4161 +0.6 0.8 hypothetical protein compare
Atu3698 +0.5 3.0 thioredoxin compare
Atu1182 +0.5 1.3 hypothetical protein compare
Atu5540 +0.5 0.8 hypothetical protein compare
Atu1629 +0.5 1.1 transcriptional regulator, ArsR family compare
Atu4139 +0.5 1.8 hypothetical protein compare
Atu4144 +0.5 1.0 hypothetical protein compare
Atu3554 +0.5 1.9 hypothetical protein compare
Atu1724 +0.5 3.1 hypothetical protein compare
Atu1730 +0.5 1.4 hypothetical protein compare
Atu1570 +0.5 0.8 hypothetical protein compare
Atu3619 +0.5 1.7 hypothetical protein compare
Atu3697 +0.5 2.9 ATP-dependent protease LA 2 compare
Atu0662 +0.5 2.6 transcriptional regulator, GntR family compare
Atu5430 +0.5 1.0 hypothetical protein compare
Atu5130 +0.5 2.7 attachment protein compare
Atu0045 +0.5 4.0 heat shock chaperone compare
Atu8185 +0.5 1.9 hypothetical protein compare
Atu1835 +0.5 1.6 hypothetical protein compare
Atu2125 +0.5 1.1 ABC transporter, nucleotide binding/ATPase protein compare
Atu0525 +0.5 2.3 transcriptional regulator, LuxR family compare
Atu2441 +0.5 1.8 RNA methylase compare
Atu8126 +0.5 2.1 putative phage tail protein I compare
Atu6165 +0.5 1.6 hypothetical protein compare
Atu4223 +0.5 1.5 sarcosine oxidase delta subunit compare
Atu1302 +0.5 1.9 hypothetical protein compare
Atu2280 +0.5 3.4 ABC transporter, membrane spanning protein (proline/glycine betaine) compare
Atu1980 +0.5 1.6 hypothetical protein compare
Atu5173 +0.5 1.2 dehydrogenase compare
Atu0185 +0.5 2.3 methylglyoxal synthase compare
Atu1264 +0.5 1.8 hypothetical protein compare
Atu4030 +0.4 2.6 sugar ABC transporter permease compare
Atu3523 +0.4 2.8 polysaccharide biosynthesis-like protein compare
Atu0106 +0.4 0.7 cold shock protein compare
Atu2746 +0.4 1.8 hypothetical protein compare
Atu0681 +0.4 1.9 hypothetical protein compare
Atu3509 +0.4 2.5 hypothetical protein compare
Atu0510 +0.4 3.3 pH adaption potassium efflux system protein compare
Atu4669 +0.4 2.7 hypothetical protein compare
Atu1952 +0.4 0.9 hypothetical protein compare
Atu0421 +0.4 1.0 ABC transporter, membrane spanning protein compare
Atu6177 +0.4 3.5 component of type IV secretion system compare
Atu1891 +0.4 1.7 cobalamin biosynthesis protein compare
Atu0746 +0.4 1.6 hypothetical protein compare
Atu4514 +0.4 1.9 RpiR family transcriptional regulator compare
Atu8022 +0.4 1.2 hypothetical protein compare
Atu5443 +0.4 2.5 TetR family transcriptional regulator compare
Atu1865 +0.4 2.1 hypothetical protein compare
Atu3515 +0.4 1.3 hypothetical protein compare
Atu4176 +0.4 1.6 hypothetical protein compare
Atu0462 +0.4 2.9 endolysin compare
Atu2634 +0.4 0.9 hypothetical protein compare
Atu1899 +0.4 2.0 ABC transporter, substrate binding protein (ribose) compare
Atu0458 +0.4 1.4 hypothetical protein compare
Atu1427 +0.4 1.5 hypothetical protein compare
Atu0749 +0.4 1.6 biotin synthesis BioY protein compare
Atu2801 +0.4 2.0 precorrin-2 C20 methyltransferase compare
Atu1921 +0.4 2.2 hypothetical protein compare
Atu4608 +0.4 3.3 hypothetical protein compare
Atu0908 +0.4 1.1 transcriptional regulator compare
Atu4609 +0.4 2.8 glycosyltransferase compare
Atu0718 +0.4 1.5 hypothetical protein compare
Atu1685 +0.4 0.7 hypothetical protein compare
Atu2163 +0.4 0.7 hypothetical protein compare
Atu8134 +0.4 1.9 hypothetical protein compare
Atu3654 +0.4 2.5 hypothetical protein compare
Atu1209 +0.4 2.4 transcriptional regulator, LysR family compare
Atu1878 +0.4 1.2 hypothetical protein compare
Atu2236 +0.4 1.4 adenine phosphoribosyltransferase compare
Atu1518 +0.4 1.6 transcriptional regulator, Fur family compare
Atu0463 +0.4 2.1 hypothetical protein compare
Atu0464 +0.4 2.1 hypothetical protein compare
Atu5513 +0.4 1.1 cold shock protein compare
Atu0813 +0.4 2.8 hypothetical protein compare
Atu0986 +0.4 0.8 hypothetical protein compare
Atu1001 +0.4 2.0 hypothetical protein compare
Atu4486 +0.4 1.6 nitroreductase compare
Atu3835 +0.4 1.2 hypothetical protein compare
Atu2432 +0.4 1.0 hypothetical protein compare
Atu1834 +0.4 2.1 mutT like protein compare
Atu0048 +0.4 3.2 hypothetical protein compare
Atu3086 +0.4 2.1 spermidine/putrescine ABC transporter permease compare
Atu0107 +0.4 1.2 hypothetical protein compare
Atu0983 +0.4 1.7 hypothetical protein compare
Atu2258 +0.4 0.9 acetyltransferase compare
Atu1525 +0.4 1.7 hypothetical protein compare
Atu1653 +0.4 1.6 hypothetical protein compare
Atu0461 +0.4 2.8 hypothetical protein compare
Atu0578 +0.4 1.7 FlbT post-transcriptional regulator of flagellin compare
Atu2633 +0.4 1.1 RhtB family transporter compare
Atu1677 +0.4 1.0 queuine tRNA-ribosyltransferase compare
Atu3286 +0.4 2.0 ABC transporter permease compare
Atu1864 +0.4 1.5 putative homoserine/homoserine lactone efflux protein compare
Atu2450 +0.4 1.3 hypothetical protein compare
Atu1702 +0.4 2.2 stationary-phase survival protein compare
Atu3396 +0.4 2.5 ABC transporter substrate-binding protein compare
Atu0105 +0.4 1.5 hypothetical protein compare
Atu8177 +0.4 2.1 hypothetical protein compare
Atu4019 +0.3 2.1 two component response regulator compare
Atu4029 +0.3 2.1 gluconolactonase compare
Atu1421 +0.3 1.5 hypothetical protein compare
Atu1240 +0.3 2.8 hypothetical protein compare
Atu8018 +0.3 0.5 hypothetical protein compare
Atu3041 +0.3 3.0 dipeptide ABC transporter substrate-binding protein compare
Atu4897 +0.3 0.5 hypothetical protein compare
Atu3532 +0.3 1.8 GntR family transcriptional regulator compare
Atu0901 +0.3 2.1 6-O-methylguanine-DNA methyltransferase compare
Atu1305 +0.3 2.3 DNA processing chain A compare
Atu5493 +0.3 1.3 hypothetical protein compare
Atu2462 +0.3 1.2 hypothetical protein compare
Atu2832 +0.3 1.4 tRNA modification GTPase compare
Atu2244 +0.3 2.2 tRNA/rRNA methyltransferase compare
Atu2279 +0.3 2.1 ABC transporter, nucleotide binding/ATPase protein (proline/glycine betaine) compare
Atu8054 +0.3 0.8 hypothetical protein compare
Atu1568 +0.3 1.9 transcriptional regulator, TetR family compare
Atu0536 +0.3 1.6 hypothetical protein compare
Atu1369 +0.3 1.2 HIT family protein compare
Atu1660 +0.3 1.4 hypothetical protein compare
Atu2455 +0.3 2.0 uracil-DNA glycosylase compare
Atu1515 +0.3 1.8 hypothetical protein compare
Atu4589 +0.3 0.7 transmembrane transport protein compare
Atu3647 +0.3 1.0 hypothetical protein compare
Atu8083 +0.3 2.6 hypothetical protein compare
Atu4028 +0.3 1.4 recombination regulator RecX compare
Atu5057 +0.3 1.0 hypothetical protein compare
Atu8124 +0.3 2.3 hypothetical protein compare
Atu4454 +0.3 1.2 RpiR family transcriptional regulator compare
Atu3214 +0.3 1.8 oligopeptide ABC transporter permease compare
Atu0044 +0.3 2.1 heat shock protein hslV compare
Atu1126 +0.3 1.5 molybdopterin converting factor, large subunit compare
Atu1837 +0.3 1.9 transcriptional regulator compare
Atu6150 +0.3 2.8 P-450 monooxygenase compare
Atu3892 +0.3 1.0 hypothetical protein compare
Atu0968 +0.3 2.2 hypothetical protein compare
Atu1177 +0.3 1.5 hypothetical protein compare
Atu4232 +0.3 1.9 GntR family transcriptional regulator compare
Atu4821 +0.3 2.0 3-oxoacyl-ACP reductase compare
Atu1642 +0.3 1.0 hypothetical protein compare
Atu2489 +0.3 2.1 hypothetical protein compare
Atu0796 +0.3 1.8 putative peptidase compare
Atu6176 +0.3 2.8 component of type IV secretion system compare
Atu3243 +0.3 1.3 hypothetical protein compare
Atu3645 +0.3 2.1 hypothetical protein compare
Atu8136 +0.3 2.2 hypothetical protein compare
Atu3394 +0.3 0.8 iron ABC transporter ATPase compare
Atu0845 +0.3 1.0 hypothetical protein compare
Atu0824 +0.3 0.6 hypothetical protein compare
Atu2122 +0.3 1.6 lytic murein transglycosylase compare
Atu0125 +0.3 1.9 peptide methionine sulfoxide reductase compare
Atu1367 +0.3 1.8 transcriptional regulator, LysR family compare
Atu2059 +0.3 1.7 transcriptional regulator, TetR family compare
Atu5449 +0.3 1.5 heat-shock protein compare
Atu5159 +0.3 1.9 hypothetical protein compare
Atu1203 +0.3 0.7 hypothetical protein compare
Atu3726 +0.3 2.0 flavin dependent oxidoreductase compare
Atu2814 +0.3 0.9 zinc-binding dehydrogenase compare
Atu3791 +0.3 2.1 L-asparaginase compare
Atu2058 +0.3 1.3 hypothetical protein compare
Atu2220 +0.3 1.5 hypothetical protein compare


Specific Phenotypes

For 1 genes in this experiment

For stress Acetosyringone in Agrobacterium fabrum C58

For stress Acetosyringone across organisms