Experiment set11IT030 for Agrobacterium fabrum C58

Compare to:

LB with Salicylic acid 0.5 mM

200 most important genes:

  gene name fitness t score description  
Atu4616 -1.7 -2.1 dTDP-4-dehydrorhamnose reductase compare
Atu0039 -1.4 -2.4 imidazoleglycerol-phosphate synthase cyclase compare
Atu3663 -1.4 -2.4 hypothetical protein compare
Atu3008 -1.3 -1.3 hypothetical protein compare
Atu2125 -1.3 -2.1 ABC transporter, nucleotide binding/ATPase protein compare
Atu1446 -1.3 -2.2 two component response regulator compare
Atu0361 -1.2 -3.0 transcriptional regulator compare
Atu2207 -1.2 -1.9 two component sensor kinase compare
Atu0399 -1.2 -4.7 dihydroorotase compare
Atu1810 -1.2 -1.6 hypothetical protein compare
Atu0319 -1.1 -1.7 ubiquinone biosynthesis protein compare
Atu0030 -1.1 -2.1 phosphocarrier protein HPr compare
Atu1679 -1.0 -2.7 peptidyl prolyl cis-trans isomerase compare
Atu0031 -1.0 -1.7 PTS system, IIA component compare
Atu1573 -1.0 -2.1 hypothetical protein compare
Atu0486 -1.0 -4.8 dihydroorotate dehydrogenase compare
Atu4077 -1.0 -6.5 glycogen branching protein compare
Atu2439 -0.9 -2.1 hypothetical protein compare
Atu3763 -0.9 -1.5 hypothetical protein compare
Atu4317 -0.9 -2.3 TetR family transcriptional regulator compare
Atu3468 -0.9 -0.9 hypothetical protein compare
Atu6114 -0.9 -2.4 hypothetical protein compare
Atu0659 -0.9 -4.2 NTP pyrophosphohydrolase, MutT family compare
Atu1470 -0.9 -1.5 Camphor resistance protein compare
Atu0051 -0.9 -4.3 two component sensor kinase compare
Atu1030 -0.9 -1.7 GTP pyrophosphohydrolase/synthetase, RelA/SpoT family compare
Atu0999 -0.9 -5.0 magnesium transport protein compare
Atu0040 -0.8 -1.5 phosphoribosylformino-5-aminoimidazole carboxamide ribotide isomerase compare
Atu3469 -0.8 -1.6 phosphoglyceromutase compare
Atu0434 -0.8 -1.7 2'-deoxycytidine 5'-triphosphate deaminase compare
Atu0331 -0.8 -2.4 sigma-54 modulation protein compare
Atu8138 -0.8 -1.7 hypothetical protein compare
Atu0149 -0.8 -2.5 enoyl-(acyl-carrier-protein) reductase compare
Atu1634 -0.7 -1.2 hypothetical protein compare
Atu4888 -0.7 -2.2 hypothetical protein compare
Atu3009 -0.7 -1.0 exopolysaccharide production protein compare
Atu2084 -0.7 -0.9 hypothetical protein compare
Atu2808 -0.7 -4.4 cobyric acid synthase compare
Atu0036 -0.7 -2.8 hypothetical protein compare
Atu2684 -0.7 -1.2 hypothetical protein compare
Atu0189 -0.7 -2.6 ABC transporter, membrane spanning protein (peptide) compare
Atu4881 -0.7 -4.1 hypothetical protein compare
Atu0784 -0.7 -2.8 hypothetical protein compare
Atu8012 -0.7 -1.6 hypothetical protein compare
Atu0422 -0.7 -1.9 ABC transporter, membrane spanning protein compare
Atu2286 -0.7 -1.3 hypothetical protein compare
Atu4133 -0.7 -1.6 hypothetical protein compare
Atu1739 -0.7 -2.8 permease compare
Atu0119 -0.7 -1.2 hypothetical protein compare
Atu2352 -0.7 -2.0 hypothetical protein compare
Atu2799 -0.7 -2.8 precorrin-6x reductase compare
Atu4078 -0.7 -5.3 glycogen phosphorylase compare
Atu2270 -0.7 -1.7 ATP-dependent Clp protease, proteolytic subunit compare
Atu2831 -0.7 -3.6 glucose inhibited division protein A compare
Atu2793 -0.7 -3.1 cobyrinic acid a,c-diamide synthase compare
Atu1307 -0.7 -2.8 dihydroorotase compare
Atu1364 -0.7 -3.2 ATP-dependent Clp protease, ATP-binding subunit compare
Atu0050 -0.7 -3.5 two component response regulator compare
Atu2073 -0.7 -3.5 membrane protein compare
Atu0298 -0.7 -3.7 orotidine 5 compare
Atu0971 -0.7 -2.6 two component sensor kinase compare
Atu3429 -0.7 -1.2 hypothetical protein compare
Atu0419 -0.7 -1.6 two component sensor kinase compare
Atu4050 -0.6 -1.3 UTP-glucose-1-phosphate uridylyltransferase compare
Atu3427 -0.6 -2.3 hypothetical protein compare
Atu1241 -0.6 -2.9 hypothetical protein compare
Atu2797 -0.6 -2.2 cobalamin biosynthesis protein compare
Atu3327 -0.6 -2.1 succinoglycan exopolysaccharide synthesis protein compare
Atu4245 -0.6 -2.5 polyamine ABC transporter permease compare
Atu1308 -0.6 -2.9 aspartate carbamoyl transferase catalytic subunit compare
Atu3739 -0.6 -1.7 phosphoglycerate kinase compare
Atu3012 -0.6 -1.3 hypothetical protein compare
Atu2805 -0.6 -3.8 cobalamin synthesis protein compare
Atu3183 -0.6 -0.8 hypothetical protein compare
Atu0141 -0.6 -1.2 cytochrome O ubiquinol oxidase subunit I compare
Atu1086 -0.6 -4.0 MFS permease compare
Atu1354 -0.6 -0.7 6-hydroxymethyl-7,8-dihydropterin pyrophosphokinase compare
Atu0842 -0.6 -1.5 hypothetical protein compare
Atu3336 -0.6 -1.5 hypothetical protein compare
Atu4890 -0.6 -1.3 IS426 transposase compare
Atu2554 -0.6 -1.4 lysyl-tRNA synthetase compare
Atu4773 -0.6 -1.3 two component response regulator compare
Atu2800 -0.6 -1.5 precorrin-3B C17-methyltransferase compare
Atu2796 -0.5 -3.0 precorrin-4 C11-methyltransferase compare
Atu2057 -0.5 -1.6 DNA helicase II compare
Atu2234 -0.5 -1.4 hypothetical protein compare
Atu1163 -0.5 -0.6 exopolysaccharide II synthesis transcriptional activator ExpG compare
Atu0658 -0.5 -3.5 phosphate permease compare
Atu0142 -0.5 -1.4 cytochrome o ubiquinol oxidase subunit II compare
Atu2184 -0.5 -2.7 transcriptional regulator, AsnC family compare
Atu1513 -0.5 -3.0 ABC excinuclease subunit A compare
Atu4875 -0.5 -3.0 hypothetical protein compare
Atu2555 -0.5 -2.4 L-lysine 2,3-aminomutase compare
Atu3160 -0.5 -1.8 hypothetical protein compare
Atu1503 -0.5 -0.9 hypothetical protein compare
Atu0184 -0.5 -1.6 glucokinase compare
Atu0013 -0.5 -3.1 NAD(P)H-flavin oxidoreductase compare
Atu3510 -0.5 -1.6 amidohydrolase compare
Atu3023 -0.5 -3.3 sugar ABC transporter permease compare
Atu3280 -0.5 -3.0 GntR family transcriptional regulator compare
Atu2832 -0.5 -2.0 tRNA modification GTPase compare
Atu0947 -0.5 -1.9 transcriptional regulator, AsnC family compare
Atu4613 -0.5 -4.2 glycosyltransferase compare
Atu3744 -0.5 -3.5 ABC transporter permease compare
Atu4882 -0.5 -1.4 hypothetical protein compare
Atu4635 -0.5 -2.6 hypothetical protein compare
Atu2344 -0.5 -1.7 lactoylglutathione lyase compare
Atu3013 -0.5 -2.0 hypothetical protein compare
Atu2140 -0.5 -1.6 hypothetical protein compare
Atu2433 -0.5 -0.9 hypothetical protein compare
Atu1779 -0.5 -1.5 hypothetical protein compare
Atu2299 -0.5 -2.2 hypothetical protein compare
Atu3016 -0.5 -2.7 phosphoglyceromutase compare
Atu2824 -0.5 -2.0 hypothetical protein compare
Atu1449 -0.5 -2.5 potassium uptake protein compare
Atu2083 -0.5 -2.0 DNA repair protein RecN compare
Atu1759 -0.5 -3.0 L-serine dehydratase compare
Atu4217 -0.5 -0.7 TetR family transcriptional regulator compare
Atu2728 -0.5 -2.2 beta (1-->2) glucan export ATP-binding protein compare
Atu4143 -0.5 -2.1 hypothetical protein compare
Atu2798 -0.5 -1.6 precorrin-6y methyltransferase compare
Atu3447 -0.5 -2.8 hypothetical protein compare
Atu2273 -0.5 -1.5 hypothetical protein compare
Atu1019 -0.4 -1.8 hypothetical protein compare
Atu1339 -0.4 -2.0 ribonuclease E compare
Atu2052 -0.4 -2.9 hypothetical protein compare
Atu2740 -0.4 -1.6 transcriptional regulator, GntR family compare
Atu3910 -0.4 -2.1 LamB/YcsF family protein compare
Atu3022 -0.4 -2.7 sugar ABC transporter permease compare
Atu3730 -0.4 -1.0 hypothetical protein compare
Atu1110 -0.4 -1.3 cytosol aminopeptidase compare
Atu1804 -0.4 -2.7 hypothetical protein compare
Atu8170 -0.4 -1.0 hypothetical protein compare
Atu0400 -0.4 -1.1 orotate phosphoribosyltransferase compare
Atu2041 -0.4 -0.7 acetyltransferase compare
Atu0843 -0.4 -3.4 P type cation (metal) transporter, ATPase component compare
Atu2810 -0.4 -3.2 cobalamin biosynthetic protein compare
Atu2238 -0.4 -2.8 ubiquinol-cytochrome c reductase cytochrome b subunit compare
Atu2787 -0.4 -0.7 hypothetical protein compare
Atu1495 -0.4 -1.1 hypothetical protein compare
Atu0981 -0.4 -2.9 glutamate-ammonia-ligase adenylyltransferase compare
Atu0544 -0.4 -0.9 hypothetical protein compare
Atu0601 -0.4 -2.9 oxidoreductase compare
Atu1705 -0.4 -1.7 SEC-independent protein translocase protein compare
Atu8194 -0.4 -1.6 hypothetical protein compare
Atu4053 -0.4 -1.0 succinoglycan biosynthesis protein compare
Atu3521 -0.4 -1.9 permease compare
Atu3083 -0.4 -2.0 hypothetical protein compare
Atu1077 -0.4 -1.7 DNA repair protein compare
Atu2249 -0.4 -0.7 hypothetical protein compare
Atu4541 -0.4 -1.9 carboxymuconolactone decarboxylase compare
Atu0689 -0.4 -3.0 ribosomal large subunit pseudouridine synthase B compare
Atu2417 -0.4 -2.1 putative gluconate 5-dehydrogenase compare
Atu1087 -0.4 -2.2 secretion protein compare
Atu0756 -0.4 -1.5 phosphoglycerate mutase compare
Atu1678 -0.4 -2.3 S-adenosylmethionine tRNA ribosyltransferase-isomerase compare
Atu3485 -0.4 -2.8 short chain dehydrogenase compare
Atu2420 -0.4 -2.7 hypothetical protein compare
Atu0602 -0.4 -2.5 glutamine synthetase compare
Atu3353 -0.4 -3.0 mannose-1-phosphate guanylyltransferase compare
Atu8096 -0.4 -0.9 hypothetical protein compare
Atu2271 -0.4 -1.6 urease accessory protein compare
Atu2189 -0.4 -2.6 hypothetical protein compare
Atu2070 -0.4 -2.7 aminopeptidase P compare
Atu0923 -0.4 -1.9 hypothetical protein compare
Atu0606 -0.4 -1.4 hypothetical protein compare
Atu2809 -0.4 -2.3 cobalamin biosynthesis protein compare
Atu8033 -0.4 -2.1 hypothetical protein compare
Atu4116 -0.4 -2.7 dipeptide ABC transporter ATPase compare
Atu8055 -0.4 -1.2 hypothetical protein compare
Atu3019 -0.4 -1.9 hypothetical protein compare
Atu0846 -0.4 -1.8 transcriptional regulator, MarR family compare
Atu1052 -0.4 -1.5 hypothetical protein compare
Atu2804 -0.4 -3.0 cobaltochelatase subunit compare
Atu3932 -0.4 -2.1 hypothetical protein compare
Atu0771 -0.4 -2.4 cytochrome c oxidase subunit III compare
Atu0471 -0.4 -1.0 hypothetical protein compare
Atu3750 -0.4 -1.1 thiamine-phosphate pyrophosphorylase compare
Atu2795 -0.4 -2.6 cobalamin biosynthetic protein compare
Atu2245 -0.4 -2.9 Na+/Pi-cotransporter compare
Atu0525 -0.4 -1.8 transcriptional regulator, LuxR family compare
Atu3757 -0.4 -0.8 hypothetical protein compare
Atu1760 -0.4 -0.7 hypothetical protein compare
Atu0941 -0.4 -0.5 hypothetical protein compare
Atu1701 -0.4 -1.1 protein-L-isoaspartate O-methyltransferase compare
Atu3911 -0.4 -2.3 hypothetical protein compare
Atu3871 -0.4 -2.1 L-lactate dehydrogenase compare
Atu0687 -0.4 -0.9 hypothetical protein compare
Atu0824 -0.4 -0.7 hypothetical protein compare
Atu3785 -0.4 -2.4 threonine aldolase compare
Atu3809 -0.4 -2.6 oxidoreductase compare
Atu1204 -0.4 -2.2 potassium uptake protein compare
Atu8190 -0.4 -2.1 hypothetical protein compare
Atu8202 -0.4 -1.4 hypothetical protein compare
Atu4205 -0.4 -2.2 TetR family transcriptional regulator compare
Atu4391 -0.4 -0.7 nitric oxide reductase NorE protein compare
Atu2807 -0.3 -1.8 cob(I)alamin adenosyltransferase compare
Atu3727 -0.3 -1.0 hypothetical protein compare
Atu3423 -0.3 -0.9 hypothetical protein compare
Atu4468 -0.3 -2.1 iron transport ABC transporter permease compare


Specific Phenotypes

None in this experiment

For Agrobacterium fabrum C58 in stress experiments

For stress Salicylic acid across organisms