Experiment set11IT028 for Agrobacterium fabrum C58

Compare to:

LB with Salicylic acid 1.25 mM

200 most important genes:

  gene name fitness t score description  
Atu2125 -1.9 -1.8 ABC transporter, nucleotide binding/ATPase protein compare
Atu0039 -1.8 -3.6 imidazoleglycerol-phosphate synthase cyclase compare
Atu0422 -1.8 -3.6 ABC transporter, membrane spanning protein compare
Atu4773 -1.7 -3.1 two component response regulator compare
Atu1030 -1.5 -2.6 GTP pyrophosphohydrolase/synthetase, RelA/SpoT family compare
Atu0769 -1.4 -2.2 protoheme IX farnesyltransferase compare
Atu3730 -1.4 -1.7 hypothetical protein compare
Atu3750 -1.3 -3.3 thiamine-phosphate pyrophosphorylase compare
Atu3009 -1.3 -1.6 exopolysaccharide production protein compare
Atu5430 -1.2 -1.1 hypothetical protein compare
Atu2439 -1.2 -2.5 hypothetical protein compare
Atu0319 -1.1 -1.7 ubiquinone biosynthesis protein compare
Atu0912 -1.1 -1.6 Na+/H+ antiporter compare
Atu0040 -1.1 -1.5 phosphoribosylformino-5-aminoimidazole carboxamide ribotide isomerase compare
Atu0030 -1.1 -2.2 phosphocarrier protein HPr compare
Atu1291 -1.1 -2.6 hypothetical protein compare
Atu1810 -1.1 -1.1 hypothetical protein compare
Atu2799 -1.0 -4.5 precorrin-6x reductase compare
Atu4616 -1.0 -1.9 dTDP-4-dehydrorhamnose reductase compare
Atu3012 -1.0 -1.5 hypothetical protein compare
Atu1028 -1.0 -2.7 hypothetical protein compare
Atu1364 -1.0 -4.8 ATP-dependent Clp protease, ATP-binding subunit compare
Atu0086 -1.0 -1.3 ribosome-binding factor A compare
Atu1077 -0.9 -3.5 DNA repair protein compare
Atu0184 -0.9 -2.4 glucokinase compare
Atu4890 -0.9 -1.9 IS426 transposase compare
Atu4884 -0.9 -2.4 hypothetical protein compare
Atu0971 -0.9 -3.5 two component sensor kinase compare
Atu6098 -0.9 -1.1 transcriptional regulator, HTH family compare
Atu0999 -0.9 -4.2 magnesium transport protein compare
Atu0659 -0.9 -3.4 NTP pyrophosphohydrolase, MutT family compare
Atu0690 -0.9 -1.9 hypothetical protein compare
Atu1110 -0.9 -2.5 cytosol aminopeptidase compare
Atu0368 -0.8 -4.1 tRNA pseudouridine synthase I compare
Atu2831 -0.8 -3.3 glucose inhibited division protein A compare
Atu0331 -0.8 -2.3 sigma-54 modulation protein compare
Atu1846 -0.8 -1.4 hypothetical protein compare
Atu1062 -0.8 -1.9 phosphatidylserine synthase compare
Atu2798 -0.8 -3.4 precorrin-6y methyltransferase compare
Atu4144 -0.8 -1.2 hypothetical protein compare
Atu3663 -0.8 -1.5 hypothetical protein compare
Atu0658 -0.8 -5.0 phosphate permease compare
Atu2793 -0.8 -3.4 cobyrinic acid a,c-diamide synthase compare
Atu3023 -0.7 -5.3 sugar ABC transporter permease compare
Atu2662 -0.7 -1.3 acetyltransferase compare
Atu0486 -0.7 -2.5 dihydroorotate dehydrogenase compare
Atu2640 -0.7 -3.1 hypothetical protein compare
Atu2807 -0.7 -4.1 cob(I)alamin adenosyltransferase compare
Atu0185 -0.7 -2.4 methylglyoxal synthase compare
Atu2245 -0.7 -5.6 Na+/Pi-cotransporter compare
Atu2555 -0.7 -2.8 L-lysine 2,3-aminomutase compare
Atu8138 -0.7 -1.0 hypothetical protein compare
Atu2809 -0.7 -4.0 cobalamin biosynthesis protein compare
Atu0977 -0.7 -2.8 serine protease DO-like protease compare
Atu1573 -0.7 -1.2 hypothetical protein compare
Atu0025 -0.7 -1.4 hypothetical protein compare
Atu4635 -0.7 -3.2 hypothetical protein compare
Atu2728 -0.7 -3.1 beta (1-->2) glucan export ATP-binding protein compare
Atu3739 -0.7 -2.4 phosphoglycerate kinase compare
Atu2796 -0.7 -3.7 precorrin-4 C11-methyltransferase compare
Atu3018 -0.7 -1.7 hypothetical protein compare
Atu1679 -0.7 -2.1 peptidyl prolyl cis-trans isomerase compare
Atu8096 -0.7 -1.5 hypothetical protein compare
Atu0602 -0.7 -4.2 glutamine synthetase compare
Atu2801 -0.7 -2.2 precorrin-2 C20 methyltransferase compare
Atu2805 -0.7 -3.8 cobalamin synthesis protein compare
Atu0399 -0.7 -3.4 dihydroorotase compare
Atu4173 -0.6 -1.8 phosphoenolpyruvate-protein phosphotransferase compare
Atu2787 -0.6 -1.0 hypothetical protein compare
Atu2795 -0.6 -2.8 cobalamin biosynthetic protein compare
Atu2585 -0.6 -3.1 hypothetical protein compare
Atu0119 -0.6 -1.1 hypothetical protein compare
Atu3014 -0.6 -1.7 hypothetical protein compare
Atu0029 -0.6 -3.3 S-adenosylhomocysteine hydrolase compare
Atu0036 -0.6 -2.4 hypothetical protein compare
Atu3481 -0.6 -3.5 enoyl-CoA hydratase compare
Atu2042 -0.6 -2.8 short chain dehydrogenase compare
Atu8202 -0.6 -2.6 hypothetical protein compare
Atu3394 -0.6 -1.7 iron ABC transporter ATPase compare
Atu0142 -0.6 -1.8 cytochrome o ubiquinol oxidase subunit II compare
Atu0601 -0.6 -3.9 oxidoreductase compare
Atu3016 -0.6 -2.6 phosphoglyceromutase compare
Atu4889 -0.6 -3.1 hypothetical protein compare
Atu0434 -0.6 -1.7 2'-deoxycytidine 5'-triphosphate deaminase compare
Atu1359 -0.6 -0.8 dnaK deletion suppressor protein compare
Atu3270 -0.6 -2.7 hypothetical protein compare
Atu2207 -0.6 -1.5 two component sensor kinase compare
Atu1204 -0.6 -2.8 potassium uptake protein compare
Atu4882 -0.6 -1.7 hypothetical protein compare
Atu3963 -0.6 -3.1 GntR family transcriptional regulator compare
Atu4217 -0.6 -1.3 TetR family transcriptional regulator compare
Atu4888 -0.6 -2.6 hypothetical protein compare
Atu1327 -0.6 -2.4 NADH-ubiquinone oxidoreductase compare
Atu3910 -0.6 -2.0 LamB/YcsF family protein compare
Atu0051 -0.6 -3.1 two component sensor kinase compare
Atu0598 -0.6 -3.3 phosphogluconate dehydratase compare
Atu1125 -0.6 -2.2 ABC transporter, membrane spanning protein compare
Atu3017 -0.6 -0.8 phosphoglyceromutase compare
Atu8012 -0.5 -1.1 hypothetical protein compare
Atu2803 -0.5 -2.5 Cobalamin biosynthesis associated protein compare
Atu4877 -0.5 -3.8 short-chain dehydrogenase compare
Atu0375 -0.5 -1.3 small heat shock protein compare
Atu0843 -0.5 -4.5 P type cation (metal) transporter, ATPase component compare
Atu2783 -0.5 -2.3 acetyltransferase compare
Atu1759 -0.5 -4.1 L-serine dehydratase compare
Atu0050 -0.5 -2.8 two component response regulator compare
Atu0784 -0.5 -1.5 hypothetical protein compare
Atu3022 -0.5 -3.7 sugar ABC transporter permease compare
Atu0298 -0.5 -2.9 orotidine 5 compare
Atu2073 -0.5 -2.7 membrane protein compare
Atu1446 -0.5 -1.2 two component response regulator compare
Atu0141 -0.5 -1.1 cytochrome O ubiquinol oxidase subunit I compare
Atu2808 -0.5 -3.2 cobyric acid synthase compare
Atu3469 -0.5 -1.7 phosphoglyceromutase compare
Atu1463 -0.5 -2.4 glycine cleavage system component H compare
Atu0947 -0.5 -1.5 transcriptional regulator, AsnC family compare
Atu0361 -0.5 -1.7 transcriptional regulator compare
Atu4880 -0.5 -3.6 AraC family transcriptional regulator compare
Atu2810 -0.5 -3.4 cobalamin biosynthetic protein compare
Atu3019 -0.5 -2.8 hypothetical protein compare
Atu2804 -0.5 -3.6 cobaltochelatase subunit compare
Atu2746 -0.5 -1.8 hypothetical protein compare
Atu3510 -0.5 -1.6 amidohydrolase compare
Atu3485 -0.5 -3.4 short chain dehydrogenase compare
Atu2832 -0.5 -2.3 tRNA modification GTPase compare
Atu2802 -0.5 -1.8 precorrin-8X methylmutase compare
Atu3483 -0.5 -2.0 3-methyl-2-oxobutanoate hydroxymethyltransferase compare
Atu8162 -0.5 -0.5 hypothetical protein compare
Atu2684 -0.5 -1.2 hypothetical protein compare
Atu3443 -0.5 -1.7 hypothetical protein compare
Atu3792 -0.5 -3.6 L-asparagine permease compare
Atu3024 -0.5 -3.6 sugar ABC transporter permease compare
Atu2800 -0.5 -2.2 precorrin-3B C17-methyltransferase compare
Atu0780 -0.5 -3.5 hypothetical protein compare
Atu5163 -0.5 -1.4 type IV secretion protein AvhB2 compare
Atu4873 -0.5 -3.0 TetR family transcriptional regulator compare
Atu1739 -0.5 -1.9 permease compare
Atu3697 -0.5 -2.6 ATP-dependent protease LA 2 compare
Atu3011 -0.5 -1.0 ArsR family transcriptional regulator compare
Atu2797 -0.5 -2.2 cobalamin biosynthesis protein compare
Atu2237 -0.5 -2.2 cytochrome c1 compare
Atu2676 -0.5 -1.7 4a-hydroxytetrahydrobiopterin dehydratase compare
Atu1373 -0.5 -3.1 hypothetical protein compare
Atu1462 -0.5 -3.2 glycine cleavage system protein P2 compare
Atu4879 -0.4 -2.7 hypothetical protein compare
Atu4613 -0.4 -3.4 glycosyltransferase compare
Atu1850 -0.4 -1.4 phosphoribosylformylglycinamidine synthetase II compare
Atu2433 -0.4 -0.8 hypothetical protein compare
Atu2052 -0.4 -2.4 hypothetical protein compare
Atu1052 -0.4 -1.7 hypothetical protein compare
Atu1980 -0.4 -1.4 hypothetical protein compare
Atu3791 -0.4 -3.1 L-asparaginase compare
Atu5429 -0.4 -2.5 transcriptional regulator compare
Atu4876 -0.4 -3.2 oxidoreductase compare
Atu0565 -0.4 -1.8 hypothetical protein compare
Atu3034 -0.4 -2.1 ROK family transcriptional regulator compare
Atu4166 -0.4 -1.3 UDP-glucose 4-epimerase compare
Atu3491 -0.4 -1.6 hypothetical protein compare
Atu2083 -0.4 -2.0 DNA repair protein RecN compare
Atu2584 -0.4 -1.4 hypothetical protein compare
Atu0773 -0.4 -2.3 surfeit 1 compare
Atu0115 -0.4 -0.7 hypothetical protein compare
Atu5010 -0.4 -1.8 hypothetical protein compare
Atu0533 -0.4 -1.5 putative inhibitor of septum formation compare
Atu0771 -0.4 -2.2 cytochrome c oxidase subunit III compare
Atu6165 -0.4 -0.6 hypothetical protein compare
Atu0638 -0.4 -1.5 hypothetical protein compare
Atu1449 -0.4 -2.6 potassium uptake protein compare
Atu4272 -0.4 -2.2 acetyl-CoA carboxylase biotin carboxyl carrier protein compare
Atu0943 -0.4 -0.8 hypothetical protein compare
Atu3593 -0.4 -2.4 hypothetical protein compare
Atu0981 -0.4 -2.9 glutamate-ammonia-ligase adenylyltransferase compare
Atu3598 -0.4 -1.2 thiol:disulfide interchange protein compare
Atu5152 -0.4 -1.9 hypothetical protein compare
Atu0540 -0.4 -1.4 hypothetical protein compare
Atu2590 -0.4 -2.2 hypothetical protein compare
Atu8131 -0.4 -3.1 pH adaption potassium efflux system protein compare
Atu3754 -0.4 -2.6 phosphoribosylaminoimidazole carboxylase catalytic subunit compare
Atu4050 -0.4 -0.7 UTP-glucose-1-phosphate uridylyltransferase compare
Atu5115 -0.4 -1.0 hypothetical protein compare
Atu0946 -0.4 -2.5 dehydrogenase compare
Atu1468 -0.4 -2.7 hypothetical protein compare
Atu0031 -0.4 -0.8 PTS system, IIA component compare
Atu3579 -0.4 -1.4 lactoylglutathione lyase compare
Atu1021 -0.4 -1.1 outer membrane protein compare
Atu2611 -0.4 -2.7 hypothetical protein compare
Atu2352 -0.4 -0.9 hypothetical protein compare
Atu2591 -0.4 -2.0 glucosyltransferase compare
Atu0689 -0.4 -2.7 ribosomal large subunit pseudouridine synthase B compare
Atu1344 -0.4 -1.2 hypothetical protein compare
Atu0630 -0.4 -1.0 hypothetical protein compare
Atu2378 -0.4 -1.5 hypothetical protein compare
Atu6114 -0.4 -1.1 hypothetical protein compare
Atu2271 -0.4 -1.9 urease accessory protein compare
Atu2821 -0.4 -1.5 transcriptional regulator, GntR family compare
Atu1760 -0.4 -0.7 hypothetical protein compare
Atu0225 -0.4 -0.6 hypothetical protein compare
Atu4841 -0.4 -2.5 DeoR family transcriptional regulator compare
Atu3020 -0.4 -2.2 GntR family transcriptional regulator compare
Atu1354 -0.4 -0.7 6-hydroxymethyl-7,8-dihydropterin pyrophosphokinase compare


Specific Phenotypes

None in this experiment

For Agrobacterium fabrum C58 in stress experiments

For stress Salicylic acid across organisms