Experiment set11IT027 for Agrobacterium fabrum C58

Compare to:

LB with Salicylic acid 1.25 mM

200 most important genes:

  gene name fitness t score description  
Atu1030 -2.4 -2.0 GTP pyrophosphohydrolase/synthetase, RelA/SpoT family compare
Atu0434 -1.8 -3.8 2'-deoxycytidine 5'-triphosphate deaminase compare
Atu1810 -1.8 -2.5 hypothetical protein compare
Atu2125 -1.5 -1.8 ABC transporter, nucleotide binding/ATPase protein compare
Atu0422 -1.5 -3.4 ABC transporter, membrane spanning protein compare
Atu0030 -1.5 -2.7 phosphocarrier protein HPr compare
Atu4616 -1.5 -2.5 dTDP-4-dehydrorhamnose reductase compare
Atu3008 -1.4 -1.4 hypothetical protein compare
Atu2439 -1.4 -2.4 hypothetical protein compare
Atu0659 -1.3 -5.2 NTP pyrophosphohydrolase, MutT family compare
Atu4882 -1.2 -2.6 hypothetical protein compare
Atu0912 -1.1 -1.6 Na+/H+ antiporter compare
Atu0601 -1.1 -7.0 oxidoreductase compare
Atu2057 -1.1 -2.1 DNA helicase II compare
Atu2249 -1.0 -1.5 hypothetical protein compare
Atu3014 -1.0 -2.2 hypothetical protein compare
Atu2799 -1.0 -4.2 precorrin-6x reductase compare
Atu0039 -1.0 -2.4 imidazoleglycerol-phosphate synthase cyclase compare
Atu1359 -0.9 -1.2 dnaK deletion suppressor protein compare
Atu4884 -0.9 -3.0 hypothetical protein compare
Atu0149 -0.9 -2.6 enoyl-(acyl-carrier-protein) reductase compare
Atu4217 -0.9 -1.3 TetR family transcriptional regulator compare
Atu3009 -0.9 -1.0 exopolysaccharide production protein compare
Atu1364 -0.9 -4.0 ATP-dependent Clp protease, ATP-binding subunit compare
Atu0040 -0.9 -0.7 phosphoribosylformino-5-aminoimidazole carboxamide ribotide isomerase compare
Atu0971 -0.9 -3.2 two component sensor kinase compare
Atu2787 -0.9 -0.8 hypothetical protein compare
Atu3910 -0.8 -3.5 LamB/YcsF family protein compare
Atu2807 -0.8 -4.5 cob(I)alamin adenosyltransferase compare
Atu2084 -0.8 -1.0 hypothetical protein compare
Atu2800 -0.8 -3.8 precorrin-3B C17-methyltransferase compare
Atu2831 -0.8 -4.4 glucose inhibited division protein A compare
Atu2809 -0.8 -4.5 cobalamin biosynthesis protein compare
Atu3730 -0.8 -1.6 hypothetical protein compare
Atu3336 -0.8 -2.6 hypothetical protein compare
Atu0050 -0.8 -3.6 two component response regulator compare
Atu4773 -0.8 -1.8 two component response regulator compare
Atu0399 -0.8 -2.5 dihydroorotase compare
Atu3016 -0.8 -4.1 phosphoglyceromutase compare
Atu0544 -0.7 -2.1 hypothetical protein compare
Atu4173 -0.7 -2.0 phosphoenolpyruvate-protein phosphotransferase compare
Atu1685 -0.7 -1.1 hypothetical protein compare
Atu4139 -0.7 -1.9 hypothetical protein compare
Atu0836 -0.7 -2.3 Glutathione-S-transferase compare
Atu0658 -0.7 -4.7 phosphate permease compare
Atu1463 -0.7 -2.9 glycine cleavage system component H compare
Atu0184 -0.7 -2.4 glucokinase compare
Atu3469 -0.7 -2.2 phosphoglyceromutase compare
Atu0124 -0.7 -2.4 hypothetical protein compare
Atu0602 -0.7 -4.2 glutamine synthetase compare
Atu2286 -0.7 -1.7 hypothetical protein compare
Atu1874 -0.7 -2.3 RecA protein compare
Atu0999 -0.7 -3.5 magnesium transport protein compare
Atu2245 -0.7 -5.1 Na+/Pi-cotransporter compare
Atu0368 -0.7 -3.5 tRNA pseudouridine synthase I compare
Atu3754 -0.7 -3.8 phosphoribosylaminoimidazole carboxylase catalytic subunit compare
Atu4873 -0.6 -2.8 TetR family transcriptional regulator compare
Atu0421 -0.6 -1.2 ABC transporter, membrane spanning protein compare
Atu0331 -0.6 -2.3 sigma-54 modulation protein compare
Atu2793 -0.6 -2.9 cobyrinic acid a,c-diamide synthase compare
Atu4888 -0.6 -2.9 hypothetical protein compare
Atu0189 -0.6 -1.4 ABC transporter, membrane spanning protein (peptide) compare
Atu1836 -0.6 -1.6 hypothetical protein compare
Atu2798 -0.6 -1.8 precorrin-6y methyltransferase compare
Atu2804 -0.6 -4.5 cobaltochelatase subunit compare
Atu0051 -0.6 -3.1 two component sensor kinase compare
Atu1446 -0.6 -1.5 two component response regulator compare
Atu0943 -0.6 -1.9 hypothetical protein compare
Atu0486 -0.6 -2.5 dihydroorotate dehydrogenase compare
Atu1542 -0.6 -2.9 Bifunctional adenosylcobalamin biosynthesis protein cobP compare
Atu3012 -0.6 -1.2 hypothetical protein compare
Atu3015 -0.6 -3.2 hypothetical protein compare
Atu0141 -0.6 -1.3 cytochrome O ubiquinol oxidase subunit I compare
Atu2801 -0.6 -1.9 precorrin-2 C20 methyltransferase compare
Atu2684 -0.6 -1.5 hypothetical protein compare
Atu3486 -0.6 -2.0 DeoR family transcriptional regulator compare
Atu0086 -0.6 -0.7 ribosome-binding factor A compare
Atu0690 -0.6 -1.3 hypothetical protein compare
Atu2069 -0.6 -2.1 hypothetical protein compare
Atu1573 -0.6 -1.3 hypothetical protein compare
Atu8046 -0.6 -2.2 hypothetical protein compare
Atu2207 -0.6 -1.9 two component sensor kinase compare
Atu2555 -0.6 -2.2 L-lysine 2,3-aminomutase compare
Atu4176 -0.6 -2.4 hypothetical protein compare
Atu2832 -0.6 -2.2 tRNA modification GTPase compare
Atu2803 -0.6 -2.6 Cobalamin biosynthesis associated protein compare
Atu1163 -0.6 -1.5 exopolysaccharide II synthesis transcriptional activator ExpG compare
Atu0941 -0.6 -0.8 hypothetical protein compare
Atu4635 -0.6 -2.4 hypothetical protein compare
Atu2795 -0.5 -3.6 cobalamin biosynthetic protein compare
Atu3505 -0.5 -3.4 3-hydroxyisobutyryl-CoA hydrolase compare
Atu1308 -0.5 -2.5 aspartate carbamoyl transferase catalytic subunit compare
Atu1679 -0.5 -1.8 peptidyl prolyl cis-trans isomerase compare
Atu1853 -0.5 -2.6 hypothetical protein compare
Atu1225 -0.5 -1.1 hypothetical protein compare
Atu2808 -0.5 -3.1 cobyric acid synthase compare
Atu2796 -0.5 -2.8 precorrin-4 C11-methyltransferase compare
Atu0025 -0.5 -1.4 hypothetical protein compare
Atu3598 -0.5 -0.9 thiol:disulfide interchange protein compare
Atu8052 -0.5 -0.9 hypothetical protein compare
Atu4889 -0.5 -2.8 hypothetical protein compare
Atu4159 -0.5 -2.4 AsnC family transcriptional regulator compare
Atu2083 -0.5 -2.4 DNA repair protein RecN compare
Atu1513 -0.5 -3.0 ABC excinuclease subunit A compare
Atu0298 -0.5 -2.4 orotidine 5 compare
Atu2590 -0.5 -3.8 hypothetical protein compare
Atu3353 -0.5 -3.5 mannose-1-phosphate guanylyltransferase compare
Atu1495 -0.5 -1.8 hypothetical protein compare
Atu3005 -0.5 -0.6 hypothetical protein compare
Atu3963 -0.5 -3.4 GntR family transcriptional regulator compare
Atu0947 -0.5 -3.1 transcriptional regulator, AsnC family compare
Atu1850 -0.5 -1.5 phosphoribosylformylglycinamidine synthetase II compare
Atu3023 -0.5 -3.6 sugar ABC transporter permease compare
Atu8165 -0.5 -1.0 hypothetical protein compare
Atu0115 -0.5 -0.8 hypothetical protein compare
Atu1439 -0.5 -1.5 hypothetical protein compare
Atu2692 -0.5 -1.6 intracellular septation protein compare
Atu4872 -0.5 -3.7 LysR family transcriptional regulator compare
Atu3740 -0.5 -3.4 fructose bisphosphate aldolase compare
Atu0322 -0.5 -2.0 enoyl CoA hydratase compare
Atu8088 -0.5 -1.3 hypothetical protein compare
Atu0142 -0.5 -2.1 cytochrome o ubiquinol oxidase subunit II compare
Atu0029 -0.5 -2.8 S-adenosylhomocysteine hydrolase compare
Atu2052 -0.5 -2.7 hypothetical protein compare
Atu4890 -0.5 -1.1 IS426 transposase compare
Atu0361 -0.5 -1.4 transcriptional regulator compare
Atu1759 -0.5 -2.9 L-serine dehydratase compare
Atu0977 -0.5 -1.9 serine protease DO-like protease compare
Atu0501 -0.5 -3.2 acyl-CoA dehydrogenase compare
Atu1804 -0.5 -2.4 hypothetical protein compare
Atu1680 -0.5 -2.2 peptidyl prolyl cis-trans isomerase compare
Atu2017 -0.5 -0.7 hypothetical protein compare
Atu2239 -0.4 -1.9 ubiquinol-cytochrome C reductase iron-sulfur subunit compare
Atu4133 -0.4 -1.6 hypothetical protein compare
Atu1302 -0.4 -1.7 hypothetical protein compare
Atu5088 -0.4 -1.8 hypothetical protein compare
Atu4137 -0.4 -1.4 hypothetical protein compare
Atu3252 -0.4 -1.7 GntR family transcriptional regulator compare
Atu4411 -0.4 -2.8 LysR family transcriptional regulator compare
Atu2746 -0.4 -1.9 hypothetical protein compare
Atu0689 -0.4 -3.5 ribosomal large subunit pseudouridine synthase B compare
Atu0843 -0.4 -3.7 P type cation (metal) transporter, ATPase component compare
Atu2585 -0.4 -2.5 hypothetical protein compare
Atu3017 -0.4 -0.7 phosphoglyceromutase compare
Atu3727 -0.4 -1.3 hypothetical protein compare
Atu0598 -0.4 -2.7 phosphogluconate dehydratase compare
Atu3776 -0.4 -1.6 hypothetical protein compare
Atu3467 -0.4 -1.4 hypothetical protein compare
Atu2773 -0.4 -2.4 hypothetical protein compare
Atu5115 -0.4 -1.1 hypothetical protein compare
Atu0946 -0.4 -3.0 dehydrogenase compare
Atu5125 -0.4 -2.3 GntR family transcriptional regulator compare
Atu1241 -0.4 -1.1 hypothetical protein compare
Atu0895 -0.4 -1.5 ABC transporter, substrate binding protein compare
Atu2728 -0.4 -2.0 beta (1-->2) glucan export ATP-binding protein compare
Atu3022 -0.4 -2.9 sugar ABC transporter permease compare
Atu8093 -0.4 -1.3 hypothetical protein compare
Atu3791 -0.4 -2.6 L-asparaginase compare
Atu3162 -0.4 -3.0 LacI family transcriptional regulator compare
Atu4875 -0.4 -2.2 hypothetical protein compare
Atu2584 -0.4 -1.9 hypothetical protein compare
Atu1678 -0.4 -2.3 S-adenosylmethionine tRNA ribosyltransferase-isomerase compare
Atu2805 -0.4 -2.6 cobalamin synthesis protein compare
Atu4615 -0.4 -2.9 glucose-1-phosphate thymidylyltransferase compare
Atu4255 -0.4 -2.0 hypothetical protein compare
Atu4618 -0.4 -3.1 dTDP-rhamnose-3,5-epimerase compare
Atu1838 -0.4 -1.6 ABC transporter, substrate binding protein (amino acid) compare
Atu4317 -0.4 -1.3 TetR family transcriptional regulator compare
Atu5045 -0.4 -1.4 hypothetical protein compare
Atu3021 -0.4 -2.7 sugar ABC transporter ATPase compare
Atu3030 -0.4 -1.9 hypothetical protein compare
Atu3483 -0.4 -1.3 3-methyl-2-oxobutanoate hydroxymethyltransferase compare
Atu2184 -0.4 -2.3 transcriptional regulator, AsnC family compare
Atu3496 -0.4 -1.3 hypothetical protein compare
Atu0510 -0.4 -2.7 pH adaption potassium efflux system protein compare
Atu4617 -0.4 -2.6 dTDP-D-glucose-4,6-dehydratase compare
Atu2802 -0.4 -2.6 precorrin-8X methylmutase compare
Atu1127 -0.4 -1.0 molybdopterin converting factor small subunit compare
Atu8055 -0.4 -1.1 hypothetical protein compare
Atu2335 -0.4 -0.7 hypothetical protein compare
Atu3416 -0.4 -1.7 ABC transporter substrate binding protein compare
Atu4161 -0.4 -1.0 hypothetical protein compare
Atu0654 -0.4 -2.6 transcriptional regulator, LysR family compare
Atu2633 -0.4 -1.1 RhtB family transporter compare
Atu3678 -0.4 -1.8 siderophore biosynthesis protein compare
Atu8190 -0.4 -2.2 hypothetical protein compare
Atu1973 -0.4 -2.4 hypothetical protein compare
Atu1535 -0.4 -0.8 cytochrome c oxidase, FixQ chain compare
Atu2452 -0.4 -1.3 hypothetical protein compare
Atu3688 -0.4 -1.9 iron(III ABC transporter permease dicitrate ABC transporter permease compare
Atu8162 -0.4 -0.7 hypothetical protein compare
Atu4880 -0.4 -2.4 AraC family transcriptional regulator compare
Atu0269 -0.4 -1.7 exodeoxyribonuclease VII large subunit compare
Atu3461 -0.4 -1.0 GntR family transcriptional regulator compare
Atu3815 -0.4 -2.1 GntR family transcriptional regulator compare
Atu1705 -0.4 -2.0 SEC-independent protein translocase protein compare
Atu0812 -0.4 -1.4 hypothetical protein compare
Atu3264 -0.4 -1.2 IclR family transcriptional regulator compare
Atu4841 -0.4 -2.4 DeoR family transcriptional regulator compare
Atu0328 -0.4 -2.3 heat-inducible transcription repressor compare


Specific Phenotypes

None in this experiment

For Agrobacterium fabrum C58 in stress experiments

For stress Salicylic acid across organisms