Experiment set11IT027 for Agrobacterium fabrum C58

Compare to:

LB with Salicylic acid 1.25 mM

200 most detrimental genes:

  gene name fitness t score description  
Atu0470 +0.7 2.4 hypothetical protein compare
Atu5451 +0.7 0.9 hypothetical protein compare
Atu5164 +0.7 1.4 type IV secretion protein AvhB3 compare
Atu1182 +0.7 1.3 hypothetical protein compare
Atu3031 +0.7 1.5 hypothetical protein compare
Atu1466 +0.6 1.4 hypothetical protein compare
Atu1818 +0.6 1.7 hypothetical protein compare
Atu2790 +0.6 1.5 3-isopropylmalate dehydratase, small subunit compare
Atu0585 +0.6 1.5 hypothetical protein compare
Atu5468 +0.5 1.7 hypothetical protein compare
Atu5513 +0.5 1.6 cold shock protein compare
Atu0026 +0.5 0.7 hypothetical protein compare
Atu1387 +0.5 2.4 transcriptional regulator, GntR family compare
Atu2235 +0.5 1.9 hypothetical protein compare
Atu8035 +0.5 1.5 hypothetical protein compare
Atu1692 +0.5 2.4 hypothetical protein compare
Atu3634 +0.5 2.9 penicillin-binding protein dacf precursor compare
Atu0562 +0.5 1.5 flagellar motor switch protein FliN compare
Atu2368 +0.5 0.9 hypothetical protein compare
Atu0041 +0.5 0.9 glutamine amidotransferase compare
Atu2067 +0.5 0.7 hypothetical protein compare
Atu8118 +0.4 2.3 putative universal stress protein compare
Atu2441 +0.4 1.8 RNA methylase compare
Atu4053 +0.4 1.0 succinoglycan biosynthesis protein compare
Atu5173 +0.4 1.9 dehydrogenase compare
Atu0671 +0.4 3.3 hypothetical protein compare
Atu0640 +0.4 1.2 hypothetical protein compare
Atu2204 +0.4 1.1 hypothetical protein compare
Atu8032 +0.4 1.6 hypothetical protein compare
Atu1219 +0.4 0.8 hypothetical protein compare
Atu8143 +0.4 2.1 hypothetical protein compare
Atu0762 +0.4 1.4 hypothetical protein compare
Atu0894 +0.4 1.2 ABC transporter, membrane spanning protein compare
Atu0948 +0.4 2.4 hypothetical protein compare
Atu1570 +0.4 0.6 hypothetical protein compare
Atu4072 +0.4 1.1 nodulation protein N compare
Atu0904 +0.4 1.9 hypothetical protein compare
Atu8200 +0.4 2.0 hypothetical protein compare
Atu0892 +0.4 2.5 hypothetical protein compare
Atu8023 +0.4 1.1 hypothetical protein compare
Atu0703 +0.4 1.6 keto-hydroxyglutarate-aldolase/keto-deoxy- phosphogluconate aldolase compare
Atu0540 +0.4 1.6 hypothetical protein compare
Atu1264 +0.4 1.5 hypothetical protein compare
Atu0193 +0.4 1.7 glutamine synthetase compare
Atu8144 +0.4 1.1 hypothetical protein compare
Atu1566 +0.4 0.8 hypothetical protein compare
Atu8053 +0.4 1.3 hypothetical protein compare
Atu0938 +0.4 1.7 transcriptional regulator, MerR family compare
Atu1232 +0.4 1.2 hypothetical protein compare
Atu5489 +0.4 1.7 hypothetical protein compare
Atu3423 +0.4 0.9 hypothetical protein compare
Atu8191 +0.4 0.9 hypothetical protein compare
Atu8022 +0.4 1.9 hypothetical protein compare
Atu2294 +0.4 1.7 aminoglycoside N6'-acetyltransferase compare
Atu4769 +0.3 1.9 hypothetical protein compare
Atu0917 +0.3 1.9 hypothetical protein compare
Atu0819 +0.3 2.0 hypothetical protein compare
Atu1952 +0.3 0.8 hypothetical protein compare
Atu4021 +0.3 2.2 LysR family transcriptional regulator compare
Atu4083 +0.3 1.7 aldose epimerase compare
Atu3067 +0.3 2.1 hypothetical protein compare
Atu4454 +0.3 1.5 RpiR family transcriptional regulator compare
Atu2324 +0.3 1.1 ureidoglycolate hydrolase compare
Atu2150 +0.3 2.5 ABC transporter, nucleotide binding/ATPase protein compare
Atu2669 +0.3 2.1 RhtB family transporter compare
Atu0152 +0.3 0.7 hypothetical protein compare
Atu3299 +0.3 1.0 hypothetical protein compare
Atu6138 +0.3 1.8 Repressor of the acc and arc operons compare
Atu4737 +0.3 1.3 hypothetical protein compare
Atu4758 +0.3 2.5 ectoine utilization protein EutC compare
Atu0530 +0.3 2.2 UDP-galactose 4-epimerase compare
Atu2002 +0.3 1.5 esterase/lipase compare
Atu4214 +0.3 1.6 cold shock protein compare
Atu5167 +0.3 1.6 type IV secretion protein AvhB6 compare
Atu1236 +0.3 2.1 polysaccharide biosynthesis glycosyltransferase compare
Atu3465 +0.3 1.3 metallo-beta-lactamase superfamily protein compare
Atu3759 +0.3 0.7 hypothetical protein compare
Atu0280 +0.3 1.1 hypothetical protein compare
Atu3732 +0.3 2.4 hemolysin compare
Atu1846 +0.3 0.8 hypothetical protein compare
Atu1510 +0.3 1.8 hypothetical protein compare
Atu1098 +0.3 1.8 hypothetical protein compare
Atu6098 +0.3 0.5 transcriptional regulator, HTH family compare
Atu4504 +0.3 2.1 MarR family transcriptional regulator compare
Atu8134 +0.3 1.8 hypothetical protein compare
Atu2407 +0.3 1.6 urease gamma subunit compare
Atu1628 +0.3 1.3 hypothetical protein compare
Atu2216 +0.3 2.0 Xaa-Pro dipeptidase compare
Atu4326 +0.3 2.4 proline/glycine betaine transporter compare
Atu1260 +0.3 0.7 hypothetical protein compare
Atu0182 +0.3 1.4 transcriptional regulator, GntR family compare
Atu1892 +0.3 1.0 hypothetical protein compare
Atu2258 +0.3 1.5 acetyltransferase compare
Atu3051 +0.3 2.1 agropine synthesis reductase compare
Atu2564 +0.3 1.8 molybdenum-binding transcriptional repressor compare
Atu1405 +0.3 1.5 transcriptional regulator, GntR family compare
Atu3291 +0.3 1.3 Lpr family transcriptional regulator compare
Atu5166 +0.3 1.8 type IV secretion protein AvhB5 compare
Atu2343 +0.3 1.0 acetyltransferase compare
Atu1508 +0.3 1.6 hypothetical protein compare
Atu0043 +0.3 1.0 imidazoleglycerol-phosphate dehydratase compare
Atu3295 +0.3 1.3 hypothetical protein compare
Atu3193 +0.3 1.2 MarR family transcriptional regulator compare
Atu3315 +0.3 1.3 UDP-glucose 4-epimerase compare
Atu1626 +0.3 1.4 NAD dependent epimerase/dehydratase family protein compare
Atu3415 +0.3 1.2 ABC transporter substrate binding protein compare
Atu0272 +0.3 1.2 transcriptional regulator, MarR family compare
Atu2465 +0.3 1.5 two component sensor kinase compare
Atu4095 +0.3 1.2 hypothetical protein compare
Atu2484 +0.3 0.6 hypothetical protein compare
Atu3074 +0.3 1.9 short chain dehydrogenase compare
Atu0609 +0.3 2.1 ABC transporter, substrate binding protein (putrescine) compare
Atu4654 +0.3 2.0 sugar ABC transporter substrate-binding protein compare
Atu8087 +0.3 0.3 putative peptidoglycan binding protein compare
Atu3726 +0.3 1.9 flavin dependent oxidoreductase compare
Atu1323 +0.3 1.1 hypothetical protein compare
Atu3346 +0.3 1.4 succinoglycan biosynthesis regulator compare
Atu1116 +0.3 1.8 two component response regulator compare
Atu2325 +0.3 1.0 hypothetical protein compare
Atu4441 +0.3 1.9 amidase compare
Atu1968 +0.3 0.8 hypothetical protein compare
Atu2531 +0.3 1.3 actinorhodin polyketide dimerase compare
Atu1117 +0.3 1.7 hypothetical protein compare
Atu0986 +0.3 0.6 hypothetical protein compare
Atu2424 +0.3 1.8 ABC transporter, nucleotide binding/ATPase protein compare
Atu3497 +0.3 1.0 hypothetical protein compare
Atu1083 +0.3 1.3 hypothetical protein compare
Atu0563 +0.3 2.0 flagellar motor switch protein FliG compare
Atu3642 +0.3 1.6 vgrG protein compare
Atu0156 +0.3 1.7 hypothetical protein compare
Atu2129 +0.3 1.4 hypothetical protein compare
Atu4846 +0.3 2.0 hypothetical protein compare
Atu1301 +0.3 1.4 hypothetical protein compare
Atu8203 +0.3 1.2 hypothetical protein compare
Atu0553 +0.3 1.5 flagellar hook-basal body complex protein compare
Atu2432 +0.3 0.8 hypothetical protein compare
Atu1550 +0.3 1.1 polypeptide deformylase compare
Atu1899 +0.3 1.3 ABC transporter, substrate binding protein (ribose) compare
Atu1137 +0.3 1.4 NTP pyrophosphohydrolase, MutT family compare
Atu0242 +0.3 1.4 carbon-nitrogen hydrolase compare
Atu4044 +0.3 2.0 glycine betaine ABC transporter ATPase compare
Atu3604 +0.3 0.7 hypoxanthine phosphoribosyltransferase compare
Atu2589 +0.3 1.6 ABC transporter, membrane spanning protein (oligopeptide) compare
Atu1366 +0.3 1.2 hypothetical protein compare
Atu8029 +0.3 0.7 hypothetical protein compare
Atu0788 +0.2 1.3 hypothetical protein compare
Atu2472 +0.2 0.3 hypothetical protein compare
Atu8188 +0.2 1.4 hypothetical protein compare
Atu5512 +0.2 1.2 hypothetical protein compare
Atu2309 +0.2 2.0 xanthine dehydrogenase compare
Atu3523 +0.2 1.6 polysaccharide biosynthesis-like protein compare
Atu5427 +0.2 1.4 hypothetical protein compare
Atu4061 +0.2 0.8 exopolysaccharide production repressor protein compare
Atu4854 +0.2 1.2 hypothetical protein compare
Atu4557 +0.2 1.5 sugar ABC transporter permease compare
Atu1688 +0.2 1.4 indole-3-glycerol-phosphate synthase compare
Atu3183 +0.2 0.4 hypothetical protein compare
Atu1840 +0.2 1.4 hypothetical protein compare
Atu3644 +0.2 1.6 hypothetical protein compare
Atu6113 +0.2 1.4 conserved hypothetical protein compare
Atu5037 +0.2 1.8 hypothetical protein compare
Atu3121 +0.2 0.5 cold shock protein compare
Atu4079 +0.2 1.3 hypothetical protein compare
Atu0744 +0.2 0.9 hypothetical protein compare
Atu4677 +0.2 0.5 hypothetical protein compare
Atu3610 +0.2 1.1 transporter compare
Atu0636 +0.2 1.4 hypothetical protein compare
Atu2113 +0.2 0.8 N-acetylmuramoyl-L-alanine amidase compare
Atu0008 +0.2 1.2 hypothetical protein compare
Atu0777 +0.2 0.4 hypothetical protein compare
Atu2714 +0.2 1.9 ABC transporter, substrate binding protein (thiamine) compare
Atu2725 +0.2 1.6 transcriptional regulator, DeoR family compare
Atu4897 +0.2 0.4 hypothetical protein compare
Atu0645 +0.2 0.4 hypothetical protein compare
Atu5152 +0.2 1.0 hypothetical protein compare
Atu0673 +0.2 1.0 hypothetical protein compare
Atu3658 +0.2 2.1 MerR family transcriptional regulator compare
Atu0163 +0.2 1.5 tonB protein compare
Atu0997 +0.2 1.1 hypothetical protein compare
Atu1001 +0.2 1.5 hypothetical protein compare
Atu0993 +0.2 1.1 transcriptional regulator, TetR family compare
Atu5161 +0.2 1.3 hypothetical protein compare
Atu4807 +0.2 1.6 exopolysaccharide export protein compare
Atu4066 +0.2 1.8 sarcosine oxidase beta subunit compare
Atu0665 +0.2 1.8 glycolate oxidase subunit compare
Atu6030 +0.2 1.5 ORF13 hypothetical protein compare
Atu0874 +0.2 1.1 acetyltransferase compare
Atu2133 +0.2 1.5 hypothetical protein compare
Atu0739 +0.2 0.9 hypothetical protein compare
Atu1070 +0.2 1.2 hypothetical protein compare
Atu1864 +0.2 1.3 putative homoserine/homoserine lactone efflux protein compare
Atu4028 +0.2 1.0 recombination regulator RecX compare
Atu8198 +0.2 1.7 hypothetical protein compare
Atu2302 +0.2 1.2 hypothetical protein compare
Atu3062 +0.2 1.4 LacI family transcriptional regulator compare
Atu3224 +0.2 1.5 ribose ABC transporter permease compare
Atu8024 +0.2 1.5 hypothetical protein compare
Atu1893 +0.2 1.7 hypothetical protein compare
Atu1427 +0.2 1.3 hypothetical protein compare
Atu1113 +0.2 1.2 dehydrogenase compare


Specific Phenotypes

None in this experiment

For Agrobacterium fabrum C58 in stress experiments

For stress Salicylic acid across organisms