Experiment set11IT019 for Agrobacterium fabrum C58

Compare to:

Adipic acid carbon source

200 most important genes:

  gene name fitness t score description  
Atu1687 -6.7 -11.2 anthranilate phosphoribosyltransferase compare
Atu0030 -5.9 -2.6 phosphocarrier protein HPr compare
Atu0017 -5.8 -4.0 N-(5-phosphoribosyl) anthranilate isomerase compare
Atu2791 -5.4 -10.3 3-isopropylmalate dehydrogenase compare
Atu3706 -5.3 -10.7 D-3-phosphoglycerate dehydrogenase compare
Atu2289 -5.2 -19.8 anthranilate synthase component I and II compare
Atu1688 -5.2 -8.0 indole-3-glycerol-phosphate synthase compare
Atu2040 -5.1 -7.0 phosphoserine phosphatase compare
Atu0099 -5.0 -15.8 prephenate dehydratase compare
Atu0536 -5.0 -8.0 hypothetical protein compare
Atu0679 -5.0 -8.3 ATP phosphoribosyltransferase compare
Atu1359 -4.9 -2.2 dnaK deletion suppressor protein compare
Atu1205 -4.8 -17.4 threonine dehydratase compare
Atu0043 -4.8 -3.3 imidazoleglycerol-phosphate dehydratase compare
Atu2264 -4.8 -17.9 2-isopropylmalate synthase compare
Atu0607 -4.7 -22.4 isocitrate lyase compare
Atu1588 -4.5 -12.4 homoserine dehydrogenase compare
Atu2036 -4.5 -17.9 acetolactate synthase III, large subunit compare
Atu0803 -4.5 -22.0 pyruvate,orthophosphate dikinase compare
Atu0678 -4.5 -9.1 histidyl-tRNA synthetase compare
Atu0047 -4.5 -18.0 malate synthase G compare
Atu2709 -4.5 -19.8 3-isopropylmalate dehydratase, large subunit compare
Atu0608 -4.5 -19.2 transcriptional regulator compare
Atu2745 -4.4 -21.5 acetyl-coenzyme A synthetase compare
Atu4505 -4.3 -12.3 LacI family transcriptional regulator compare
Atu3740 -4.3 -13.5 fructose bisphosphate aldolase compare
Atu4773 -4.3 -2.4 two component response regulator compare
Atu1845 -4.3 -5.2 phosphoribosylformylglycinamidine synthase I compare
Atu0035 -4.2 -13.4 phosphoenolpyruvate carboxykinase compare
Atu1141 -4.2 -9.8 Phosphoribosylglycinamide synthetase compare
Atu0606 -4.2 -3.9 hypothetical protein compare
Atu1750 -4.2 -4.4 phosphoribosyl c-AMP cyclohydrolase compare
Atu1307 -4.1 -9.9 dihydroorotase compare
Atu0298 -4.1 -11.9 orotidine 5 compare
Atu0399 -4.1 -9.9 dihydroorotase compare
Atu2718 -4.1 -9.3 homoserine O-succinyltransferase compare
Atu0486 -4.1 -6.7 dihydroorotate dehydrogenase compare
Atu0537 -4.1 -9.4 histidinol dehydrogenase compare
Atu1844 -3.9 -5.3 Phosphoribosylformylglycinamidine synthetase compare
Atu1075 -3.9 -7.3 amidophosphoribosyltransferase compare
Atu1030 -3.9 -2.8 GTP pyrophosphohydrolase/synthetase, RelA/SpoT family compare
Atu0038 -3.8 -5.2 phosphoribosyl-ATP pyrophosphohydrolase compare
Atu1140 -3.8 -8.8 phosphoribosyalaminoimidazole-succinocarboxamide synthase compare
Atu1850 -3.8 -3.5 phosphoribosylformylglycinamidine synthetase II compare
Atu3885 -3.8 -12.0 inositol monophosphatase compare
Atu2650 -3.8 -16.5 glycerol-3-phosphate dehydrogenase compare
Atu1620 -3.7 -15.5 triosephosphate isomerase compare
Atu0432 -3.7 -8.8 O-succinylhomoserine sulfhydrylase compare
Atu0647 -3.7 -10.4 phosphoribosylamine--glycine ligase compare
Atu2225 -3.7 -15.3 transcriptional regulator compare
Atu3707 -3.7 -4.9 phosphoserine aminotransferase compare
Atu0039 -3.6 -3.1 imidazoleglycerol-phosphate synthase cyclase compare
Atu1308 -3.5 -10.3 aspartate carbamoyl transferase catalytic subunit compare
Atu3739 -3.3 -3.9 phosphoglycerate kinase compare
Atu3469 -3.3 -3.8 phosphoglyceromutase compare
Atu3754 -3.2 -6.8 phosphoribosylaminoimidazole carboxylase catalytic subunit compare
Atu3482 -3.1 -10.8 pantoate--beta-alanine ligase compare
Atu0400 -3.1 -6.2 orotate phosphoribosyltransferase compare
Atu0041 -3.0 -3.7 glutamine amidotransferase compare
Atu3755 -3.0 -6.6 phosphoribosylaminoimidazole carboxylase ATPase subunit compare
Atu2790 -3.0 -3.9 3-isopropylmalate dehydratase, small subunit compare
Atu2747 -2.9 -14.0 hypothetical protein compare
Atu2684 -2.7 -4.4 hypothetical protein compare
Atu2224 -2.5 -10.9 aldehyde dehydrogenase compare
Atu0040 -2.5 -2.2 phosphoribosylformino-5-aminoimidazole carboxamide ribotide isomerase compare
Atu2115 -2.3 -12.3 pyrophosphate--fructose-6-phosphate 1-phosphotransferase compare
Atu3763 -2.3 -2.1 hypothetical protein compare
Atu6098 -2.2 -1.9 transcriptional regulator, HTH family compare
Atu3783 -2.1 -14.4 glutamate synthase subunit beta compare
Atu0663 -2.0 -11.7 hypothetical protein compare
Atu1686 -2.0 -13.4 peptidyl-prolyl cis-trans isomerse D compare
Atu3731 -2.0 -10.7 5-formyltetrahydrofolate cyclo-ligase compare
Atu2125 -1.9 -2.1 ABC transporter, nucleotide binding/ATPase protein compare
Atu3483 -1.9 -5.6 3-methyl-2-oxobutanoate hydroxymethyltransferase compare
Atu2015 -1.9 -10.5 aminotransferase compare
Atu0086 -1.8 -1.8 ribosome-binding factor A compare
Atu4346 -1.8 -5.8 hypothetical protein compare
Atu0626 -1.7 -9.2 alcohol dehydrogenase compare
Atu0664 -1.7 -10.9 transcriptional regulator, LysR family compare
Atu1589 -1.7 -7.0 aminotransferase, class I compare
Atu3784 -1.7 -14.4 glutamate synthase large subunit compare
Atu2207 -1.6 -2.3 two component sensor kinase compare
Atu0501 -1.6 -11.2 acyl-CoA dehydrogenase compare
Atu2155 -1.6 -11.7 methionine synthase compare
Atu6114 -1.5 -2.2 hypothetical protein compare
Atu1456 -1.5 -8.6 sulfite reductase (NADPH) hemoprotein beta-component compare
Atu1810 -1.5 -1.7 hypothetical protein compare
Atu0031 -1.4 -1.8 PTS system, IIA component compare
Atu4711 -1.4 -7.3 two component sensor kinase compare
Atu2554 -1.4 -3.1 lysyl-tRNA synthetase compare
Atu4098 -1.4 -7.6 quinolinate synthetase compare
Atu0894 -1.4 -2.2 ABC transporter, membrane spanning protein compare
Atu4514 -1.4 -4.2 RpiR family transcriptional regulator compare
Atu0723 -1.4 -2.2 FAD dependent oxidoreductase compare
Atu0502 -1.3 -5.2 acetyl-CoA acetyltransferase compare
Atu4502 -1.3 -7.2 cobalamin synthesis protein compare
Atu0641 -1.3 -4.6 hypothetical protein compare
Atu1028 -1.3 -2.2 hypothetical protein compare
Atu4166 -1.3 -3.3 UDP-glucose 4-epimerase compare
Atu3486 -1.3 -3.5 DeoR family transcriptional regulator compare
Atu1464 -1.3 -6.8 glycine cleavage system T protein, aminomethyltransferase compare
Atu4096 -1.3 -7.8 nicotinate-nucleotide pyrophosphorylase compare
Atu5125 -1.3 -5.3 GntR family transcriptional regulator compare
Atu0503 -1.2 -10.3 enoyl-CoA hydratase compare
Atu2205 -1.2 -4.5 transcriptional regulator, MarR family compare
Atu6138 -1.2 -6.4 Repressor of the acc and arc operons compare
Atu1748 -1.2 -8.1 NIFU-like protein compare
Atu8087 -1.2 -1.5 putative peptidoglycan binding protein compare
Atu2017 -1.2 -1.1 hypothetical protein compare
Atu1463 -1.1 -4.4 glycine cleavage system component H compare
Atu3162 -1.1 -7.1 LacI family transcriptional regulator compare
Atu1454 -1.1 -5.3 siroheme synthase compare
Atu4685 -1.1 -6.1 LacI family transcriptional regulator compare
Atu0434 -1.1 -3.2 2'-deoxycytidine 5'-triphosphate deaminase compare
Atu2439 -1.1 -1.7 hypothetical protein compare
Atu1462 -1.1 -7.6 glycine cleavage system protein P2 compare
Atu0029 -1.1 -4.6 S-adenosylhomocysteine hydrolase compare
Atu0876 -1.0 -2.6 superoxide dismutase compare
Atu0777 -1.0 -1.2 hypothetical protein compare
Atu0062 -1.0 -4.8 transcriptional regulator, ROK family compare
Atu0769 -1.0 -1.7 protoheme IX farnesyltransferase compare
Atu0941 -1.0 -1.1 hypothetical protein compare
Atu1455 -1.0 -4.0 hypothetical protein compare
Atu1904 -1.0 -4.5 transcriptional regulator compare
Atu1422 -1.0 -6.7 transcriptional regulator, MarR family compare
Atu0189 -1.0 -1.8 ABC transporter, membrane spanning protein (peptide) compare
Atu2548 -1.0 -7.3 phosphoribosylaminoimidazole-succinocarboxamide synthase compare
Atu4364 -0.9 -5.3 LacI family transcriptional regulator compare
Atu0354 -0.9 -2.1 ferric uptake regulator compare
Atu2376 -0.9 -0.9 hypothetical protein compare
Atu0401 -0.9 -5.6 fructokinase compare
Atu8115 -0.9 -3.6 Hypothetical Protein compare
Atu0025 -0.9 -1.7 hypothetical protein compare
Atu4541 -0.9 -2.5 carboxymuconolactone decarboxylase compare
Atu0977 -0.9 -2.8 serine protease DO-like protease compare
Atu2726 -0.9 -7.2 pyruvate carboxylase compare
Atu4097 -0.9 -5.2 L-aspartate oxidase compare
Atu1225 -0.8 -1.9 hypothetical protein compare
Atu5173 -0.8 -2.5 dehydrogenase compare
Atu4702 -0.8 -4.5 GntR family transcriptional regulator compare
Atu1419 -0.8 -4.0 transcriptional regulator, GntR family compare
Atu3337 -0.8 -4.7 LacI family transcriptional regulator compare
Atu1445 -0.8 -2.7 two component sensor kinase compare
Atu3264 -0.8 -4.1 IclR family transcriptional regulator compare
Atu4161 -0.8 -1.5 hypothetical protein compare
Atu4501 -0.8 -4.5 hypothetical protein compare
Atu0677 -0.8 -1.6 hypothetical protein compare
Atu4217 -0.8 -1.1 TetR family transcriptional regulator compare
Atu3908 -0.8 -5.4 GntR family transcriptional regulator compare
Atu3468 -0.8 -0.7 hypothetical protein compare
Atu0188 -0.8 -1.7 ABC transporter, membrane spanning protein (peptide) compare
Atu2396 -0.7 -3.0 urease accessory protein compare
Atu2662 -0.7 -1.3 acetyltransferase compare
Atu4674 -0.7 -5.2 GntR family transcriptional regulator compare
Atu1774 -0.7 -4.7 ABC transporter, substrate binding protein (peptide) compare
Atu0149 -0.7 -2.1 enoyl-(acyl-carrier-protein) reductase compare
Atu0346 -0.7 -2.6 uridylyltransferase/uridylyl-removing enzyme UTase compare
Atu2800 -0.7 -3.2 precorrin-3B C17-methyltransferase compare
Atu2640 -0.7 -2.8 hypothetical protein compare
Atu1286 -0.7 -2.4 hypothetical protein compare
Atu8025 -0.7 -1.3 hypothetical protein compare
Atu4792 -0.7 -1.9 hypothetical protein compare
Atu4616 -0.7 -0.9 dTDP-4-dehydrorhamnose reductase compare
Atu4072 -0.7 -1.6 nodulation protein N compare
Atu1446 -0.7 -1.8 two component response regulator compare
Atu2193 -0.7 -0.9 hypothetical protein compare
Atu0190 -0.7 -3.2 ABC transporter, nucleotide binding/ATPase protein (peptide) compare
Atu2821 -0.7 -3.8 transcriptional regulator, GntR family compare
Atu1163 -0.7 -1.8 exopolysaccharide II synthesis transcriptional activator ExpG compare
Atu2740 -0.7 -2.6 transcriptional regulator, GntR family compare
Atu8161 -0.7 -1.3 hypothetical protein compare
Atu0687 -0.7 -1.5 hypothetical protein compare
Atu5160 -0.7 -1.9 transcriptional regulator protein compare
Atu2237 -0.7 -3.2 cytochrome c1 compare
Atu4446 -0.7 -5.2 hypothetical protein compare
Atu3429 -0.7 -1.2 hypothetical protein compare
Atu0887 -0.7 -3.5 acetyltransferase compare
Atu4469 -0.7 -1.9 iron ABC transporter permease compare
Atu5540 -0.7 -1.0 hypothetical protein compare
Atu0272 -0.7 -2.2 transcriptional regulator, MarR family compare
Atu3619 -0.6 -2.4 hypothetical protein compare
Atu1372 -0.6 -3.7 hypothetical protein compare
Atu0923 -0.6 -3.7 hypothetical protein compare
Atu0533 -0.6 -1.9 putative inhibitor of septum formation compare
Atu4576 -0.6 -4.5 ROK family transcriptional regulator compare
Atu2493 -0.6 -4.3 NAD(P)+ transhydrogenase compare
Atu2807 -0.6 -2.9 cob(I)alamin adenosyltransferase compare
Atu4317 -0.6 -2.5 TetR family transcriptional regulator compare
Atu8118 -0.6 -3.7 putative universal stress protein compare
Atu0886 -0.6 -1.1 hypothetical protein compare
Atu3732 -0.6 -3.7 hemolysin compare
Atu2675 -0.6 -2.1 hypothetical protein compare
Atu1739 -0.6 -2.3 permease compare
Atu1076 -0.6 -1.8 colicin V production protein compare
Atu4232 -0.6 -2.4 GntR family transcriptional regulator compare
Atu3466 -0.6 -1.5 ArsR family transcriptional regulator compare
Atu5501 -0.6 -2.3 hypothetical protein compare
Atu3963 -0.6 -3.2 GntR family transcriptional regulator compare
Atu1457 -0.6 -2.0 hypothetical protein compare
Atu1470 -0.6 -0.6 Camphor resistance protein compare


Specific Phenotypes

For 4 genes in this experiment

For carbon source Adipic acid in Agrobacterium fabrum C58

For carbon source Adipic acid across organisms