Experiment set11IT017 for Agrobacterium fabrum C58

Compare to:

Glutaric acid carbon source

200 most important genes:

  gene name fitness t score description  
Atu1750 -7.5 -7.0 phosphoribosyl c-AMP cyclohydrolase compare
Atu0099 -7.2 -11.0 prephenate dehydratase compare
Atu0679 -7.2 -4.9 ATP phosphoribosyltransferase compare
Atu0486 -7.0 -6.8 dihydroorotate dehydrogenase compare
Atu1307 -6.8 -8.1 dihydroorotase compare
Atu0606 -6.6 -4.5 hypothetical protein compare
Atu2040 -6.4 -4.4 phosphoserine phosphatase compare
Atu2684 -6.4 -4.4 hypothetical protein compare
Atu2709 -6.4 -19.6 3-isopropylmalate dehydratase, large subunit compare
Atu1075 -6.3 -8.7 amidophosphoribosyltransferase compare
Atu2289 -6.3 -16.4 anthranilate synthase component I and II compare
Atu1845 -6.3 -5.3 phosphoribosylformylglycinamidine synthase I compare
Atu1687 -6.3 -11.4 anthranilate phosphoribosyltransferase compare
Atu3754 -6.3 -8.8 phosphoribosylaminoimidazole carboxylase catalytic subunit compare
Atu3706 -6.2 -7.3 D-3-phosphoglycerate dehydrogenase compare
Atu1588 -6.1 -9.4 homoserine dehydrogenase compare
Atu3707 -6.1 -4.2 phosphoserine aminotransferase compare
Atu2791 -6.0 -10.1 3-isopropylmalate dehydrogenase compare
Atu2264 -6.0 -12.8 2-isopropylmalate synthase compare
Atu0047 -6.0 -17.7 malate synthase G compare
Atu0536 -6.0 -9.1 hypothetical protein compare
Atu1688 -6.0 -5.8 indole-3-glycerol-phosphate synthase compare
Atu0647 -5.9 -5.8 phosphoribosylamine--glycine ligase compare
Atu0038 -5.9 -7.0 phosphoribosyl-ATP pyrophosphohydrolase compare
Atu3740 -5.9 -11.4 fructose bisphosphate aldolase compare
Atu2036 -5.9 -14.3 acetolactate synthase III, large subunit compare
Atu1205 -5.9 -15.2 threonine dehydratase compare
Atu0030 -5.8 -2.5 phosphocarrier protein HPr compare
Atu0017 -5.8 -4.0 N-(5-phosphoribosyl) anthranilate isomerase compare
Atu0803 -5.8 -22.4 pyruvate,orthophosphate dikinase compare
Atu0678 -5.8 -5.6 histidyl-tRNA synthetase compare
Atu0607 -5.8 -19.5 isocitrate lyase compare
Atu0400 -5.7 -6.8 orotate phosphoribosyltransferase compare
Atu0608 -5.7 -16.2 transcriptional regulator compare
Atu0432 -5.6 -7.4 O-succinylhomoserine sulfhydrylase compare
Atu1141 -5.6 -9.4 Phosphoribosylglycinamide synthetase compare
Atu2718 -5.6 -8.6 homoserine O-succinyltransferase compare
Atu0399 -5.6 -8.6 dihydroorotase compare
Atu2650 -5.5 -14.1 glycerol-3-phosphate dehydrogenase compare
Atu0298 -5.5 -10.5 orotidine 5 compare
Atu1308 -5.5 -5.4 aspartate carbamoyl transferase catalytic subunit compare
Atu1844 -5.3 -4.9 Phosphoribosylformylglycinamidine synthetase compare
Atu1140 -5.2 -5.5 phosphoribosyalaminoimidazole-succinocarboxamide synthase compare
Atu0035 -5.1 -12.9 phosphoenolpyruvate carboxykinase compare
Atu1030 -5.1 -3.5 GTP pyrophosphohydrolase/synthetase, RelA/SpoT family compare
Atu0537 -5.0 -8.4 histidinol dehydrogenase compare
Atu0041 -5.0 -3.4 glutamine amidotransferase compare
Atu2790 -4.9 -2.7 3-isopropylmalate dehydratase, small subunit compare
Atu1359 -4.9 -2.1 dnaK deletion suppressor protein compare
Atu0043 -4.8 -3.3 imidazoleglycerol-phosphate dehydratase compare
Atu0039 -4.8 -3.3 imidazoleglycerol-phosphate synthase cyclase compare
Atu2769 -4.7 -17.3 acetyl-CoA acetyltransferase; poly-beta-hydroxybutyrate biosynthesis compare
Atu3885 -4.5 -11.8 inositol monophosphatase compare
Atu1620 -4.4 -15.4 triosephosphate isomerase compare
Atu4418 -4.4 -6.6 glutaryl-CoA dehydrogenase compare
Atu1850 -4.3 -4.6 phosphoribosylformylglycinamidine synthetase II compare
Atu4505 -4.1 -11.7 LacI family transcriptional regulator compare
Atu3755 -4.1 -6.6 phosphoribosylaminoimidazole carboxylase ATPase subunit compare
Atu3469 -4.1 -3.9 phosphoglyceromutase compare
Atu3482 -4.0 -8.1 pantoate--beta-alanine ligase compare
Atu2127 -4.0 -10.8 L-carnitine dehydratase compare
Atu3739 -3.7 -4.0 phosphoglycerate kinase compare
Atu2745 -3.5 -20.2 acetyl-coenzyme A synthetase compare
Atu3763 -3.4 -2.3 hypothetical protein compare
Atu2747 -3.4 -14.6 hypothetical protein compare
Atu3731 -3.3 -12.0 5-formyltetrahydrofolate cyclo-ligase compare
Atu0040 -3.3 -1.9 phosphoribosylformino-5-aminoimidazole carboxamide ribotide isomerase compare
Atu4419 -3.2 -11.3 LysR family transcriptional regulator compare
Atu4711 -3.0 -10.8 two component sensor kinase compare
Atu2726 -2.9 -19.8 pyruvate carboxylase compare
Atu3483 -2.9 -7.2 3-methyl-2-oxobutanoate hydroxymethyltransferase compare
Atu1446 -2.8 -4.9 two component response regulator compare
Atu1464 -2.7 -7.1 glycine cleavage system T protein, aminomethyltransferase compare
Atu0434 -2.7 -4.2 2'-deoxycytidine 5'-triphosphate deaminase compare
Atu2015 -2.6 -10.9 aminotransferase compare
Atu1463 -2.6 -7.7 glycine cleavage system component H compare
Atu1462 -2.5 -15.1 glycine cleavage system protein P2 compare
Atu3597 -2.5 -11.9 3-hydroxybutyryl-CoA dehydrogenase compare
Atu2155 -2.4 -17.1 methionine synthase compare
Atu0501 -2.3 -15.6 acyl-CoA dehydrogenase compare
Atu0502 -2.3 -9.4 acetyl-CoA acetyltransferase compare
Atu2225 -2.2 -11.2 transcriptional regulator compare
Atu3783 -2.2 -15.3 glutamate synthase subunit beta compare
Atu4773 -2.2 -3.0 two component response regulator compare
Atu1589 -2.2 -9.6 aminotransferase, class I compare
Atu0664 -2.2 -13.8 transcriptional regulator, LysR family compare
Atu6098 -2.1 -1.8 transcriptional regulator, HTH family compare
Atu5125 -2.1 -6.2 GntR family transcriptional regulator compare
Atu1686 -2.0 -15.8 peptidyl-prolyl cis-trans isomerse D compare
Atu1456 -2.0 -11.0 sulfite reductase (NADPH) hemoprotein beta-component compare
Atu0503 -2.0 -14.5 enoyl-CoA hydratase compare
Atu1454 -1.9 -6.4 siroheme synthase compare
Atu0663 -1.9 -12.2 hypothetical protein compare
Atu0062 -1.9 -8.9 transcriptional regulator, ROK family compare
Atu6114 -1.9 -2.4 hypothetical protein compare
Atu1028 -1.9 -4.5 hypothetical protein compare
Atu2205 -1.9 -6.8 transcriptional regulator, MarR family compare
Atu3784 -1.9 -15.3 glutamate synthase large subunit compare
Atu0031 -1.8 -2.0 PTS system, IIA component compare
Atu0188 -1.8 -4.1 ABC transporter, membrane spanning protein (peptide) compare
Atu0331 -1.8 -3.5 sigma-54 modulation protein compare
Atu4096 -1.7 -9.0 nicotinate-nucleotide pyrophosphorylase compare
Atu0029 -1.7 -7.4 S-adenosylhomocysteine hydrolase compare
Atu2115 -1.7 -9.9 pyrophosphate--fructose-6-phosphate 1-phosphotransferase compare
Atu0895 -1.7 -3.3 ABC transporter, substrate binding protein compare
Atu0354 -1.7 -3.2 ferric uptake regulator compare
Atu2224 -1.6 -8.7 aldehyde dehydrogenase compare
Atu4098 -1.6 -9.8 quinolinate synthetase compare
Atu3486 -1.6 -3.2 DeoR family transcriptional regulator compare
Atu2554 -1.6 -3.3 lysyl-tRNA synthetase compare
Atu2207 -1.5 -3.0 two component sensor kinase compare
Atu0190 -1.5 -7.1 ABC transporter, nucleotide binding/ATPase protein (peptide) compare
Atu4514 -1.5 -5.6 RpiR family transcriptional regulator compare
Atu0189 -1.5 -2.4 ABC transporter, membrane spanning protein (peptide) compare
Atu1449 -1.5 -5.1 potassium uptake protein compare
Atu4685 -1.4 -6.7 LacI family transcriptional regulator compare
Atu0894 -1.4 -2.5 ABC transporter, membrane spanning protein compare
Atu3337 -1.4 -8.0 LacI family transcriptional regulator compare
Atu0322 -1.4 -4.7 enoyl CoA hydratase compare
Atu1904 -1.4 -2.3 transcriptional regulator compare
Atu0660 -1.4 -5.3 hydrolase compare
Atu4702 -1.4 -6.3 GntR family transcriptional regulator compare
Atu1204 -1.4 -7.3 potassium uptake protein compare
Atu0401 -1.3 -6.8 fructokinase compare
Atu0723 -1.3 -2.0 FAD dependent oxidoreductase compare
Atu0893 -1.3 -3.9 ABC transporter, nucleotide binding/ATPase protein compare
Atu1774 -1.3 -5.0 ABC transporter, substrate binding protein (peptide) compare
Atu8115 -1.3 -5.9 Hypothetical Protein compare
Atu1447 -1.2 -3.5 two component sensor kinase compare
Atu1327 -1.2 -3.5 NADH-ubiquinone oxidoreductase compare
Atu3730 -1.2 -1.2 hypothetical protein compare
Atu4616 -1.2 -2.3 dTDP-4-dehydrorhamnose reductase compare
Atu2548 -1.2 -9.1 phosphoribosylaminoimidazole-succinocarboxamide synthase compare
Atu1455 -1.2 -3.5 hypothetical protein compare
Atu3908 -1.2 -7.6 GntR family transcriptional regulator compare
Atu0346 -1.2 -2.2 uridylyltransferase/uridylyl-removing enzyme UTase compare
Atu2578 -1.2 -4.2 cAMP-dependent protein kinase regulatory subunit compare
Atu0641 -1.1 -4.0 hypothetical protein compare
Atu4097 -1.1 -7.0 L-aspartate oxidase compare
Atu0091 -1.1 -5.9 MFS permease compare
Atu3219 -1.1 -7.9 dihydroxy-acid dehydratase compare
Atu4217 -1.1 -1.5 TetR family transcriptional regulator compare
Atu2640 -1.1 -3.3 hypothetical protein compare
Atu3009 -1.1 -1.1 exopolysaccharide production protein compare
Atu4364 -1.1 -7.1 LacI family transcriptional regulator compare
Atu4530 -1.1 -5.0 TetR family transcriptional regulator compare
Atu3963 -1.1 -6.0 GntR family transcriptional regulator compare
Atu2662 -1.1 -1.8 acetyltransferase compare
Atu0777 -1.1 -1.2 hypothetical protein compare
Atu4072 -1.0 -1.7 nodulation protein N compare
Atu4541 -1.0 -3.1 carboxymuconolactone decarboxylase compare
Atu4477 -1.0 -5.7 TetR family transcriptional regulator compare
Atu1891 -1.0 -2.9 cobalamin biosynthesis protein compare
Atu3162 -1.0 -7.1 LacI family transcriptional regulator compare
Atu2238 -1.0 -5.3 ubiquinol-cytochrome c reductase cytochrome b subunit compare
Atu0784 -1.0 -3.9 hypothetical protein compare
Atu0876 -1.0 -2.3 superoxide dismutase compare
Atu2809 -1.0 -5.7 cobalamin biosynthesis protein compare
Atu2746 -1.0 -2.4 hypothetical protein compare
Atu2620 -1.0 -1.5 hypothetical protein compare
Atu2793 -1.0 -4.4 cobyrinic acid a,c-diamide synthase compare
Atu3732 -1.0 -4.8 hemolysin compare
Atu0498 -0.9 -6.2 hypothetical protein compare
Atu0300 -0.9 -3.8 methyltransferase compare
Atu1542 -0.9 -4.9 Bifunctional adenosylcobalamin biosynthesis protein cobP compare
Atu4502 -0.9 -4.9 cobalamin synthesis protein compare
Atu0272 -0.9 -3.1 transcriptional regulator, MarR family compare
Atu2606 -0.9 -3.9 transcriptional regulator, GntR family compare
Atu3579 -0.9 -2.8 lactoylglutathione lyase compare
Atu1748 -0.9 -5.8 NIFU-like protein compare
Atu2798 -0.9 -3.9 precorrin-6y methyltransferase compare
Atu2511 -0.9 -4.3 D-alanine aminotransferase compare
Atu2799 -0.9 -3.3 precorrin-6x reductase compare
Atu0677 -0.9 -2.4 hypothetical protein compare
Atu1076 -0.9 -2.4 colicin V production protein compare
Atu1685 -0.9 -1.1 hypothetical protein compare
Atu2237 -0.8 -4.0 cytochrome c1 compare
Atu0769 -0.8 -1.2 protoheme IX farnesyltransferase compare
Atu0977 -0.8 -2.4 serine protease DO-like protease compare
Atu2808 -0.8 -5.1 cobyric acid synthase compare
Atu0319 -0.8 -1.3 ubiquinone biosynthesis protein compare
Atu1705 -0.8 -3.0 SEC-independent protein translocase protein compare
Atu4166 -0.8 -1.3 UDP-glucose 4-epimerase compare
Atu3663 -0.8 -1.0 hypothetical protein compare
Atu0422 -0.8 -1.9 ABC transporter, membrane spanning protein compare
Atu2804 -0.8 -6.0 cobaltochelatase subunit compare
Atu8130 -0.8 -5.5 hypothetical protein compare
Atu2795 -0.8 -4.3 cobalamin biosynthetic protein compare
Atu2169 -0.8 -3.9 hypothetical protein compare
Atu4618 -0.8 -5.4 dTDP-rhamnose-3,5-epimerase compare
Atu1457 -0.8 -2.1 hypothetical protein compare
Atu0981 -0.8 -5.5 glutamate-ammonia-ligase adenylyltransferase compare
Atu0690 -0.8 -1.9 hypothetical protein compare
Atu0107 -0.8 -2.1 hypothetical protein compare
Atu0626 -0.8 -5.5 alcohol dehydrogenase compare
Atu4317 -0.8 -3.4 TetR family transcriptional regulator compare
Atu2821 -0.8 -3.1 transcriptional regulator, GntR family compare
Atu2807 -0.7 -4.0 cob(I)alamin adenosyltransferase compare
Atu4576 -0.7 -4.7 ROK family transcriptional regulator compare
Atu3794 -0.7 -5.1 FadR family transcriptional regulator compare


Specific Phenotypes

For 8 genes in this experiment

For carbon source Glutaric acid in Agrobacterium fabrum C58

For carbon source Glutaric acid across organisms