Experiment set11IT014 for Agrobacterium fabrum C58

Compare to:

L-(+)-Erythrulose carbon source

200 most important genes:

  gene name fitness t score description  
Atu0038 -6.3 -7.4 phosphoribosyl-ATP pyrophosphohydrolase compare
Atu2289 -6.0 -19.8 anthranilate synthase component I and II compare
Atu1750 -5.9 -8.1 phosphoribosyl c-AMP cyclohydrolase compare
Atu1850 -5.6 -5.0 phosphoribosylformylglycinamidine synthetase II compare
Atu1140 -5.5 -6.1 phosphoribosyalaminoimidazole-succinocarboxamide synthase compare
Atu0679 -5.5 -8.3 ATP phosphoribosyltransferase compare
Atu2264 -5.4 -16.0 2-isopropylmalate synthase compare
Atu0099 -5.4 -15.0 prephenate dehydratase compare
Atu2709 -5.3 -21.7 3-isopropylmalate dehydratase, large subunit compare
Atu1462 -5.2 -17.1 glycine cleavage system protein P2 compare
Atu0678 -5.2 -8.0 histidyl-tRNA synthetase compare
Atu1687 -5.2 -10.9 anthranilate phosphoribosyltransferase compare
Atu0486 -5.1 -9.2 dihydroorotate dehydrogenase compare
Atu0017 -5.1 -5.0 N-(5-phosphoribosyl) anthranilate isomerase compare
Atu1688 -5.0 -8.9 indole-3-glycerol-phosphate synthase compare
Atu2036 -4.9 -18.7 acetolactate synthase III, large subunit compare
Atu1359 -4.9 -2.2 dnaK deletion suppressor protein compare
Atu1141 -4.9 -10.1 Phosphoribosylglycinamide synthetase compare
Atu2791 -4.8 -12.0 3-isopropylmalate dehydrogenase compare
Atu0039 -4.8 -3.3 imidazoleglycerol-phosphate synthase cyclase compare
Atu1463 -4.8 -7.8 glycine cleavage system component H compare
Atu0537 -4.8 -9.1 histidinol dehydrogenase compare
Atu1075 -4.7 -10.8 amidophosphoribosyltransferase compare
Atu1464 -4.6 -11.4 glycine cleavage system T protein, aminomethyltransferase compare
Atu0400 -4.6 -6.7 orotate phosphoribosyltransferase compare
Atu0399 -4.5 -10.5 dihydroorotase compare
Atu3755 -4.5 -6.2 phosphoribosylaminoimidazole carboxylase ATPase subunit compare
Atu0030 -4.5 -2.9 phosphocarrier protein HPr compare
Atu0047 -4.3 -20.6 malate synthase G compare
Atu0041 -4.2 -4.0 glutamine amidotransferase compare
Atu3754 -4.2 -8.8 phosphoribosylaminoimidazole carboxylase catalytic subunit compare
Atu3482 -4.1 -9.8 pantoate--beta-alanine ligase compare
Atu1308 -4.1 -9.1 aspartate carbamoyl transferase catalytic subunit compare
Atu0298 -4.1 -10.0 orotidine 5 compare
Atu1844 -4.0 -5.4 Phosphoribosylformylglycinamidine synthetase compare
Atu3885 -4.0 -11.7 inositol monophosphatase compare
Atu1307 -3.9 -8.8 dihydroorotase compare
Atu1030 -3.9 -2.9 GTP pyrophosphohydrolase/synthetase, RelA/SpoT family compare
Atu3783 -3.9 -20.9 glutamate synthase subunit beta compare
Atu2790 -3.8 -4.2 3-isopropylmalate dehydratase, small subunit compare
Atu2650 -3.8 -13.8 glycerol-3-phosphate dehydrogenase compare
Atu4773 -3.8 -3.3 two component response regulator compare
Atu0043 -3.7 -3.6 imidazoleglycerol-phosphate dehydratase compare
Atu0647 -3.7 -9.5 phosphoribosylamine--glycine ligase compare
Atu1845 -3.7 -7.7 phosphoribosylformylglycinamidine synthase I compare
Atu2745 -3.4 -18.0 acetyl-coenzyme A synthetase compare
Atu1205 -3.4 -15.8 threonine dehydratase compare
Atu0536 -3.4 -10.4 hypothetical protein compare
Atu0040 -3.3 -2.0 phosphoribosylformino-5-aminoimidazole carboxamide ribotide isomerase compare
Atu0803 -3.2 -21.4 pyruvate,orthophosphate dikinase compare
Atu2718 -3.2 -8.9 homoserine O-succinyltransferase compare
Atu3784 -3.0 -23.3 glutamate synthase large subunit compare
Atu3731 -2.9 -12.9 5-formyltetrahydrofolate cyclo-ligase compare
Atu0432 -2.9 -9.7 O-succinylhomoserine sulfhydrylase compare
Atu2225 -2.9 -11.5 transcriptional regulator compare
Atu0035 -2.7 -13.1 phosphoenolpyruvate carboxykinase compare
Atu6098 -2.7 -2.0 transcriptional regulator, HTH family compare
Atu2015 -2.7 -13.6 aminotransferase compare
Atu0062 -2.7 -9.3 transcriptional regulator, ROK family compare
Atu3483 -2.4 -7.2 3-methyl-2-oxobutanoate hydroxymethyltransferase compare
Atu0205 -2.4 -12.9 methylmalonate-semialdehyde dehydrogenase compare
Atu2684 -2.1 -4.2 hypothetical protein compare
Atu0608 -2.1 -13.3 transcriptional regulator compare
Atu4505 -2.1 -11.4 LacI family transcriptional regulator compare
Atu0607 -2.1 -14.7 isocitrate lyase compare
Atu2155 -2.0 -15.3 methionine synthase compare
Atu0876 -2.0 -3.0 superoxide dismutase compare
Atu4685 -2.0 -9.6 LacI family transcriptional regulator compare
Atu2205 -1.9 -6.2 transcriptional regulator, MarR family compare
Atu3290 -1.9 -9.2 phosphomethylpyrimidine kinase compare
Atu0029 -1.9 -7.2 S-adenosylhomocysteine hydrolase compare
Atu0346 -1.8 -2.8 uridylyltransferase/uridylyl-removing enzyme UTase compare
Atu3763 -1.8 -1.7 hypothetical protein compare
Atu0606 -1.8 -3.6 hypothetical protein compare
Atu2125 -1.7 -1.9 ABC transporter, nucleotide binding/ATPase protein compare
Atu3486 -1.7 -2.5 DeoR family transcriptional regulator compare
Atu4743 -1.7 -8.0 LacI family transcriptional regulator compare
Atu2224 -1.6 -8.2 aldehyde dehydrogenase compare
Atu0501 -1.6 -11.3 acyl-CoA dehydrogenase compare
Atu1446 -1.6 -2.6 two component response regulator compare
Atu4711 -1.6 -4.8 two component sensor kinase compare
Atu0401 -1.6 -6.6 fructokinase compare
Atu3289 -1.6 -3.6 thiamine-phosphate pyrophosphorylase compare
Atu3469 -1.6 -3.4 phosphoglyceromutase compare
Atu2569 -1.5 -10.3 thiamine biosynthesis protein compare
Atu3878 -1.5 -10.8 transcriptional regulator compare
Atu0503 -1.5 -11.1 enoyl-CoA hydratase compare
Atu1028 -1.4 -4.0 hypothetical protein compare
Atu3288 -1.4 -5.3 hydroxyethylthiazole kinase compare
Atu0502 -1.4 -6.6 acetyl-CoA acetyltransferase compare
Atu1686 -1.4 -9.9 peptidyl-prolyl cis-trans isomerse D compare
Atu5125 -1.4 -5.7 GntR family transcriptional regulator compare
Atu1589 -1.4 -6.4 aminotransferase, class I compare
Atu4098 -1.4 -9.4 quinolinate synthetase compare
Atu4096 -1.3 -6.0 nicotinate-nucleotide pyrophosphorylase compare
Atu2193 -1.3 -1.5 hypothetical protein compare
Atu4217 -1.3 -1.9 TetR family transcriptional regulator compare
Atu2740 -1.3 -6.6 transcriptional regulator, GntR family compare
Atu1904 -1.3 -5.7 transcriptional regulator compare
Atu4541 -1.2 -3.6 carboxymuconolactone decarboxylase compare
Atu3162 -1.2 -6.7 LacI family transcriptional regulator compare
Atu4502 -1.2 -7.1 cobalamin synthesis protein compare
Atu3337 -1.2 -6.7 LacI family transcriptional regulator compare
Atu2554 -1.2 -2.6 lysyl-tRNA synthetase compare
Atu6114 -1.2 -3.6 hypothetical protein compare
Atu3707 -1.2 -3.4 phosphoserine aminotransferase compare
Atu1748 -1.2 -7.8 NIFU-like protein compare
Atu2207 -1.1 -2.6 two component sensor kinase compare
Atu2532 -1.1 -4.6 transcriptional regulator, MarR family compare
Atu1354 -1.1 -1.6 6-hydroxymethyl-7,8-dihydropterin pyrophosphokinase compare
Atu0977 -1.1 -3.2 serine protease DO-like protease compare
Atu2376 -1.1 -1.0 hypothetical protein compare
Atu3465 -1.1 -3.3 metallo-beta-lactamase superfamily protein compare
Atu0894 -1.1 -2.1 ABC transporter, membrane spanning protein compare
Atu1456 -1.0 -5.3 sulfite reductase (NADPH) hemoprotein beta-component compare
Atu3505 -1.0 -6.7 3-hydroxyisobutyryl-CoA hydrolase compare
Atu2020 -1.0 -3.7 transcriptional regulator, TetR family compare
Atu2798 -1.0 -4.0 precorrin-6y methyltransferase compare
Atu2799 -1.0 -4.2 precorrin-6x reductase compare
Atu2633 -1.0 -3.0 RhtB family transporter compare
Atu0641 -1.0 -3.9 hypothetical protein compare
Atu0626 -1.0 -6.6 alcohol dehydrogenase compare
Atu3732 -1.0 -5.5 hemolysin compare
Atu0086 -1.0 -1.4 ribosome-binding factor A compare
Atu2831 -1.0 -4.5 glucose inhibited division protein A compare
Atu4825 -1.0 -5.2 dehydrogenase compare
Atu3963 -1.0 -4.3 GntR family transcriptional regulator compare
Atu8115 -1.0 -4.6 Hypothetical Protein compare
Atu3706 -0.9 -4.8 D-3-phosphoglycerate dehydrogenase compare
Atu2548 -0.9 -6.8 phosphoribosylaminoimidazole-succinocarboxamide synthase compare
Atu6138 -0.9 -6.5 Repressor of the acc and arc operons compare
Atu2239 -0.9 -3.6 ubiquinol-cytochrome C reductase iron-sulfur subunit compare
Atu4446 -0.9 -6.9 hypothetical protein compare
Atu4824 -0.9 -5.8 IclR family transcriptional regulator compare
Atu3712 -0.9 -1.7 hypothetical protein compare
Atu3095 -0.9 -3.1 hypothetical protein compare
Atu4576 -0.9 -5.2 ROK family transcriptional regulator compare
Atu2726 -0.9 -7.3 pyruvate carboxylase compare
Atu4674 -0.9 -6.5 GntR family transcriptional regulator compare
Atu3730 -0.8 -1.1 hypothetical protein compare
Atu1455 -0.8 -2.4 hypothetical protein compare
Atu4128 -0.8 -6.2 GMC type oxidoreductase compare
Atu1286 -0.8 -3.6 hypothetical protein compare
Atu1457 -0.8 -2.0 hypothetical protein compare
Atu1902 -0.8 -3.3 transketolase compare
Atu2640 -0.8 -3.1 hypothetical protein compare
Atu0807 -0.8 -4.6 metallo-beta-lactamase superfamily protein compare
Atu2692 -0.8 -2.2 intracellular septation protein compare
Atu0101 -0.8 -4.5 cytochrome c compare
Atu2555 -0.8 -3.0 L-lysine 2,3-aminomutase compare
Atu0434 -0.8 -2.5 2'-deoxycytidine 5'-triphosphate deaminase compare
Atu4477 -0.8 -4.0 TetR family transcriptional regulator compare
Atu0665 -0.8 -5.4 glycolate oxidase subunit compare
Atu3353 -0.8 -5.8 mannose-1-phosphate guanylyltransferase compare
Atu3485 -0.8 -3.7 short chain dehydrogenase compare
Atu2035 -0.8 -5.2 acetolactate synthase, small subunit compare
Atu2807 -0.8 -3.5 cob(I)alamin adenosyltransferase compare
Atu4617 -0.8 -5.9 dTDP-D-glucose-4,6-dehydratase compare
Atu3619 -0.8 -2.9 hypothetical protein compare
Atu4364 -0.8 -4.1 LacI family transcriptional regulator compare
Atu2747 -0.8 -4.8 hypothetical protein compare
Atu3240 -0.8 -4.4 ROK family transcriptional regulator compare
Atu4702 -0.8 -5.2 GntR family transcriptional regulator compare
Atu4097 -0.8 -5.0 L-aspartate oxidase compare
Atu2238 -0.8 -4.5 ubiquinol-cytochrome c reductase cytochrome b subunit compare
Atu1678 -0.8 -4.0 S-adenosylmethionine tRNA ribosyltransferase-isomerase compare
Atu1546 -0.7 -3.1 transcriptional regulator, MerR family compare
Atu2801 -0.7 -3.3 precorrin-2 C20 methyltransferase compare
Atu3739 -0.7 -2.3 phosphoglycerate kinase compare
Atu1810 -0.7 -1.0 hypothetical protein compare
Atu2809 -0.7 -4.6 cobalamin biosynthesis protein compare
Atu2040 -0.7 -2.7 phosphoserine phosphatase compare
Atu3908 -0.7 -5.3 GntR family transcriptional regulator compare
Atu3075 -0.7 -3.9 TetR family transcriptional regulator compare
Atu2802 -0.7 -4.0 precorrin-8X methylmutase compare
Atu0667 -0.7 -5.3 glycolate oxidase iron-sulfur subunit compare
Atu4148 -0.7 -3.6 UDP-glucuronic acid epimerase compare
Atu4346 -0.7 -3.4 hypothetical protein compare
Atu4317 -0.7 -2.8 TetR family transcriptional regulator compare
Atu0141 -0.7 -0.9 cytochrome O ubiquinol oxidase subunit I compare
Atu3476 -0.7 -3.0 AsnC family transcriptional regulator compare
Atu4614 -0.7 -3.6 glycosyltransferase compare
Atu0768 -0.7 -5.5 cytochrome-c oxidase chain I compare
Atu0300 -0.7 -4.0 methyltransferase compare
Atu2493 -0.7 -5.4 NAD(P)+ transhydrogenase compare
Atu2804 -0.7 -5.3 cobaltochelatase subunit compare
Atu0854 -0.7 -2.0 hypothetical protein compare
Atu0666 -0.7 -4.5 glycolate oxidase subunit compare
Atu2803 -0.7 -2.7 Cobalamin biosynthesis associated protein compare
Atu4053 -0.7 -1.5 succinoglycan biosynthesis protein compare
Atu2183 -0.7 -5.0 lipopolysaccharide core biosynthesis mannosyltransferase compare
Atu2379 -0.7 -4.8 phosphomannomutase compare
Atu0361 -0.7 -1.7 transcriptional regulator compare
Atu3876 -0.7 -4.5 glycerol-3-phosphate dehydrogenase compare
Atu0354 -0.7 -1.5 ferric uptake regulator compare
Atu2565 -0.7 -4.4 hypothetical protein compare
Atu4618 -0.7 -4.8 dTDP-rhamnose-3,5-epimerase compare
Atu0852 -0.6 -2.6 transcriptional regulator, MarR family compare
Atu4161 -0.6 -1.5 hypothetical protein compare
Atu3343 -0.6 -3.9 trehalose utilization-like protein compare


Specific Phenotypes

For 4 genes in this experiment

For carbon source L-(+)-Erythrulose in Agrobacterium fabrum C58

For carbon source L-(+)-Erythrulose across organisms