Experiment set11IT006 for Agrobacterium fabrum C58

Compare to:

Beta-alanine carbon source

200 most important genes:

  gene name fitness t score description  
Atu1687 -7.0 -9.7 anthranilate phosphoribosyltransferase compare
Atu1844 -6.9 -4.7 Phosphoribosylformylglycinamidine synthetase compare
Atu2040 -6.5 -4.5 phosphoserine phosphatase compare
Atu3707 -6.2 -4.3 phosphoserine aminotransferase compare
Atu1688 -6.1 -5.9 indole-3-glycerol-phosphate synthase compare
Atu0679 -6.0 -8.2 ATP phosphoribosyltransferase compare
Atu0017 -6.0 -4.1 N-(5-phosphoribosyl) anthranilate isomerase compare
Atu0030 -6.0 -2.7 phosphocarrier protein HPr compare
Atu0803 -6.0 -20.9 pyruvate,orthophosphate dikinase compare
Atu2289 -5.9 -21.0 anthranilate synthase component I and II compare
Atu0607 -5.9 -22.8 isocitrate lyase compare
Atu2791 -5.9 -10.5 3-isopropylmalate dehydrogenase compare
Atu2709 -5.8 -20.9 3-isopropylmalate dehydratase, large subunit compare
Atu0678 -5.8 -6.8 histidyl-tRNA synthetase compare
Atu0400 -5.7 -7.8 orotate phosphoribosyltransferase compare
Atu2747 -5.7 -15.6 hypothetical protein compare
Atu0536 -5.6 -9.4 hypothetical protein compare
Atu0099 -5.6 -16.1 prephenate dehydratase compare
Atu2036 -5.6 -17.5 acetolactate synthase III, large subunit compare
Atu0035 -5.5 -14.7 phosphoenolpyruvate carboxykinase compare
Atu2264 -5.5 -15.9 2-isopropylmalate synthase compare
Atu1588 -5.4 -11.5 homoserine dehydrogenase compare
Atu0038 -5.4 -6.2 phosphoribosyl-ATP pyrophosphohydrolase compare
Atu1750 -5.3 -6.6 phosphoribosyl c-AMP cyclohydrolase compare
Atu4505 -5.3 -11.9 LacI family transcriptional regulator compare
Atu0537 -5.3 -8.1 histidinol dehydrogenase compare
Atu3740 -5.3 -13.2 fructose bisphosphate aldolase compare
Atu1845 -5.3 -7.6 phosphoribosylformylglycinamidine synthase I compare
Atu0606 -5.3 -3.4 hypothetical protein compare
Atu3755 -5.3 -6.2 phosphoribosylaminoimidazole carboxylase ATPase subunit compare
Atu2718 -5.2 -11.1 homoserine O-succinyltransferase compare
Atu0608 -5.2 -13.8 transcriptional regulator compare
Atu1030 -5.2 -3.5 GTP pyrophosphohydrolase/synthetase, RelA/SpoT family compare
Atu3706 -5.1 -9.1 D-3-phosphoglycerate dehydrogenase compare
Atu0399 -5.0 -9.5 dihydroorotase compare
Atu2790 -5.0 -2.9 3-isopropylmalate dehydratase, small subunit compare
Atu0298 -5.0 -11.6 orotidine 5 compare
Atu3754 -5.0 -6.2 phosphoribosylaminoimidazole carboxylase catalytic subunit compare
Atu1205 -5.0 -17.3 threonine dehydratase compare
Atu1359 -4.9 -2.2 dnaK deletion suppressor protein compare
Atu1308 -4.9 -10.4 aspartate carbamoyl transferase catalytic subunit compare
Atu0043 -4.9 -3.4 imidazoleglycerol-phosphate dehydratase compare
Atu0039 -4.9 -3.4 imidazoleglycerol-phosphate synthase cyclase compare
Atu0047 -4.9 -20.4 malate synthase G compare
Atu1850 -4.8 -7.3 phosphoribosylformylglycinamidine synthetase II compare
Atu1620 -4.8 -15.4 triosephosphate isomerase compare
Atu0432 -4.7 -12.8 O-succinylhomoserine sulfhydrylase compare
Atu2650 -4.6 -13.2 glycerol-3-phosphate dehydrogenase compare
Atu3483 -4.4 -8.9 3-methyl-2-oxobutanoate hydroxymethyltransferase compare
Atu0647 -4.4 -10.2 phosphoribosylamine--glycine ligase compare
Atu3885 -4.4 -12.2 inositol monophosphatase compare
Atu0041 -4.3 -4.2 glutamine amidotransferase compare
Atu1140 -4.3 -8.6 phosphoribosyalaminoimidazole-succinocarboxamide synthase compare
Atu0486 -4.3 -7.7 dihydroorotate dehydrogenase compare
Atu0205 -4.3 -16.4 methylmalonate-semialdehyde dehydrogenase compare
Atu3291 -4.1 -8.7 Lpr family transcriptional regulator compare
Atu1075 -4.1 -11.5 amidophosphoribosyltransferase compare
Atu1307 -4.1 -8.8 dihydroorotase compare
Atu3482 -4.0 -10.8 pantoate--beta-alanine ligase compare
Atu3731 -4.0 -12.9 5-formyltetrahydrofolate cyclo-ligase compare
Atu3469 -3.9 -3.7 phosphoglyceromutase compare
Atu1141 -3.8 -8.1 Phosphoribosylglycinamide synthetase compare
Atu1463 -3.8 -12.0 glycine cleavage system component H compare
Atu3293 -3.7 -12.9 D-amino acid dehydrogenase small subunit conserved
Atu1464 -3.5 -9.4 glycine cleavage system T protein, aminomethyltransferase compare
Atu0040 -3.4 -2.0 phosphoribosylformino-5-aminoimidazole carboxamide ribotide isomerase compare
Atu1462 -3.3 -17.9 glycine cleavage system protein P2 compare
Atu3329 -3.3 -13.2 beta alanine--pyruvate transaminase conserved
Atu3328 -3.3 -7.7 aldehyde dehydrogenase compare
Atu0723 -3.2 -3.0 FAD dependent oxidoreductase compare
Atu3292 -3.0 -16.4 alanine racemase compare
Atu2015 -3.0 -16.4 aminotransferase compare
Atu3763 -2.7 -2.6 hypothetical protein compare
Atu4096 -2.7 -10.7 nicotinate-nucleotide pyrophosphorylase compare
Atu2745 -2.7 -17.4 acetyl-coenzyme A synthetase compare
Atu2115 -2.7 -12.5 pyrophosphate--fructose-6-phosphate 1-phosphotransferase compare
Atu6098 -2.7 -2.0 transcriptional regulator, HTH family compare
Atu3783 -2.7 -14.8 glutamate synthase subunit beta compare
Atu3739 -2.6 -3.3 phosphoglycerate kinase compare
Atu4098 -2.5 -14.5 quinolinate synthetase compare
Atu2225 -2.5 -10.2 transcriptional regulator compare
Atu0876 -2.3 -4.2 superoxide dismutase compare
Atu1589 -2.2 -6.3 aminotransferase, class I compare
Atu3486 -2.1 -5.1 DeoR family transcriptional regulator compare
Atu3784 -2.1 -17.0 glutamate synthase large subunit compare
Atu0062 -2.1 -9.1 transcriptional regulator, ROK family compare
Atu4711 -2.0 -7.6 two component sensor kinase compare
Atu4685 -2.0 -9.3 LacI family transcriptional regulator compare
Atu1748 -2.0 -12.2 NIFU-like protein compare
Atu2224 -2.0 -9.2 aldehyde dehydrogenase compare
Atu4702 -1.9 -10.9 GntR family transcriptional regulator compare
Atu2439 -1.9 -2.2 hypothetical protein compare
Atu4346 -1.9 -5.7 hypothetical protein compare
Atu0207 -1.9 -14.4 transcriptional regulator, LysR family compare
Atu1686 -1.8 -13.0 peptidyl-prolyl cis-trans isomerse D compare
Atu3908 -1.8 -10.8 GntR family transcriptional regulator compare
Atu4824 -1.8 -7.8 IclR family transcriptional regulator compare
Atu2155 -1.8 -14.4 methionine synthase compare
Atu3337 -1.7 -10.0 LacI family transcriptional regulator compare
Atu2205 -1.7 -6.5 transcriptional regulator, MarR family compare
Atu0434 -1.7 -4.5 2'-deoxycytidine 5'-triphosphate deaminase compare
Atu1028 -1.7 -4.7 hypothetical protein compare
Atu0769 -1.7 -2.1 protoheme IX farnesyltransferase compare
Atu4773 -1.7 -2.2 two component response regulator compare
Atu2207 -1.7 -3.2 two component sensor kinase compare
Atu6114 -1.7 -1.4 hypothetical protein compare
Atu4514 -1.6 -4.5 RpiR family transcriptional regulator compare
Atu3963 -1.6 -8.7 GntR family transcriptional regulator compare
Atu0626 -1.6 -9.4 alcohol dehydrogenase compare
Atu0031 -1.5 -2.0 PTS system, IIA component compare
Atu2237 -1.5 -6.3 cytochrome c1 compare
Atu4317 -1.4 -5.6 TetR family transcriptional regulator compare
Atu0331 -1.4 -3.0 sigma-54 modulation protein compare
Atu1577 -1.4 -6.2 ABC transporter, substrate binding protein (amino acid) compare
Atu4541 -1.4 -5.2 carboxymuconolactone decarboxylase compare
Atu1579 -1.4 -9.2 ABC transporter, membrane spanning protein (amino acid) compare
Atu4825 -1.4 -7.0 dehydrogenase compare
Atu2239 -1.4 -5.0 ubiquinol-cytochrome C reductase iron-sulfur subunit compare
Atu2238 -1.4 -7.5 ubiquinol-cytochrome c reductase cytochrome b subunit compare
Atu1286 -1.3 -5.5 hypothetical protein compare
Atu0401 -1.3 -7.9 fructokinase compare
Atu1904 -1.3 -2.1 transcriptional regulator compare
Atu2532 -1.3 -4.1 transcriptional regulator, MarR family compare
Atu4364 -1.3 -6.3 LacI family transcriptional regulator compare
Atu1580 -1.3 -7.3 ABC transporter, nucleotide binding/ATPase protein (amino acid) compare
Atu3144 -1.3 -4.7 GntR family transcriptional regulator compare
Atu2633 -1.3 -3.5 RhtB family transporter compare
Atu0501 -1.2 -8.8 acyl-CoA dehydrogenase compare
Atu0101 -1.2 -6.2 cytochrome c compare
Atu4576 -1.2 -7.7 ROK family transcriptional regulator compare
Atu1578 -1.2 -6.6 ABC transporter, membrane spanning protein (amino acid) compare
Atu3162 -1.2 -6.6 LacI family transcriptional regulator compare
Atu1810 -1.2 -1.3 hypothetical protein compare
Atu0354 -1.2 -2.8 ferric uptake regulator compare
Atu5125 -1.2 -4.1 GntR family transcriptional regulator compare
Atu5007 -1.2 -6.8 santhopine-responsive transcriptional repressor compare
Atu8115 -1.1 -5.0 Hypothetical Protein compare
Atu1339 -1.1 -4.0 ribonuclease E compare
Atu1242 -1.1 -7.4 cytochrome oxidase assembly factor compare
Atu0188 -1.1 -1.9 ABC transporter, membrane spanning protein (peptide) compare
Atu2548 -1.1 -8.4 phosphoribosylaminoimidazole-succinocarboxamide synthase compare
Atu0502 -1.1 -5.5 acetyl-CoA acetyltransferase compare
Atu0771 -1.1 -6.9 cytochrome c oxidase subunit III compare
Atu1456 -1.1 -7.3 sulfite reductase (NADPH) hemoprotein beta-component compare
Atu0852 -1.1 -3.9 transcriptional regulator, MarR family compare
Atu2554 -1.1 -2.6 lysyl-tRNA synthetase compare
Atu0029 -1.1 -5.3 S-adenosylhomocysteine hydrolase compare
Atu4446 -1.1 -7.5 hypothetical protein compare
Atu0894 -1.1 -2.2 ABC transporter, membrane spanning protein compare
Atu1074 -1.1 -6.6 NAD/NADP dependent oxidoreductase compare
Atu2427 -1.1 -5.7 ABC transporter, membrane spanning protein conserved
Atu0768 -1.1 -8.4 cytochrome-c oxidase chain I compare
Atu1774 -1.1 -6.3 ABC transporter, substrate binding protein (peptide) compare
Atu3912 -1.1 -6.6 hypothetical protein compare
Atu5160 -1.1 -2.7 transcriptional regulator protein compare
Atu1454 -1.0 -5.2 siroheme synthase compare
Atu0503 -1.0 -7.5 enoyl-CoA hydratase compare
Atu1446 -1.0 -2.2 two component response regulator compare
Atu2798 -1.0 -4.3 precorrin-6y methyltransferase compare
Atu2793 -1.0 -4.6 cobyrinic acid a,c-diamide synthase compare
Atu2424 -1.0 -4.5 ABC transporter, nucleotide binding/ATPase protein compare
Atu0770 -1.0 -5.0 cytochrome C oxidase assembly protein compare
Atu3878 -1.0 -6.9 transcriptional regulator compare
Atu0190 -1.0 -5.2 ABC transporter, nucleotide binding/ATPase protein (peptide) compare
Atu4743 -1.0 -4.6 LacI family transcriptional regulator compare
Atu0641 -1.0 -3.9 hypothetical protein compare
Atu3910 -1.0 -3.7 LamB/YcsF family protein compare
Atu4822 -1.0 -6.3 acyl-CoA synthetase compare
Atu1447 -1.0 -3.0 two component sensor kinase compare
Atu2746 -1.0 -3.6 hypothetical protein compare
Atu3264 -1.0 -4.6 IclR family transcriptional regulator compare
Atu2200 -1.0 -1.8 cold shock protein compare
Atu0189 -0.9 -2.8 ABC transporter, membrane spanning protein (peptide) compare
Atu0361 -0.9 -2.2 transcriptional regulator compare
Atu4097 -0.9 -4.6 L-aspartate oxidase compare
Atu5430 -0.9 -1.7 hypothetical protein compare
Atu0923 -0.9 -3.8 hypothetical protein compare
Atu1770 -0.9 -5.3 glutamine synthetase compare
Atu3663 -0.9 -1.8 hypothetical protein compare
Atu3240 -0.9 -6.1 ROK family transcriptional regulator compare
Atu2425 -0.9 -4.8 ABC transporter, nucleotide binding/ATPase protein compare
Atu0664 -0.9 -7.1 transcriptional regulator, LysR family compare
Atu2800 -0.9 -3.0 precorrin-3B C17-methyltransferase compare
Atu4530 -0.9 -3.9 TetR family transcriptional regulator compare
Atu0346 -0.9 -2.1 uridylyltransferase/uridylyl-removing enzyme UTase compare
Atu5075 -0.9 -4.7 GntR family transcriptional regulator compare
Atu2606 -0.9 -3.0 transcriptional regulator, GntR family compare
Atu0767 -0.9 -4.7 cytochrome c oxidase subunit II compare
Atu2831 -0.9 -3.7 glucose inhibited division protein A compare
Atu1455 -0.9 -3.0 hypothetical protein compare
Atu0422 -0.9 -2.5 ABC transporter, membrane spanning protein compare
Atu0011 -0.9 -3.3 transcriptional regulator compare
Atu1705 -0.8 -4.2 SEC-independent protein translocase protein compare
Atu1405 -0.8 -2.6 transcriptional regulator, GntR family compare
Atu2808 -0.8 -4.8 cobyric acid synthase compare
Atu4823 -0.8 -5.3 acetyl-CoA acetyltransferase compare
Atu0590 -0.8 -4.7 transcriptional regulator repressor compare
Atu4616 -0.8 -1.3 dTDP-4-dehydrorhamnose reductase compare
Atu2684 -0.8 -1.3 hypothetical protein compare
Atu3913 -0.8 -4.8 biotin carboxylase compare


Specific Phenotypes

For 15 genes in this experiment

For carbon source Beta-alanine in Agrobacterium fabrum C58

For carbon source Beta-alanine across organisms