Experiment set11IT006 for Agrobacterium fabrum C58

Compare to:

Beta-alanine carbon source

200 most detrimental genes:

  gene name fitness t score description  
Atu0524 +1.1 7.6 transcriptional regulator, LuxR family compare
Atu0525 +1.1 6.4 transcriptional regulator, LuxR family compare
Atu4144 +1.0 1.7 hypothetical protein compare
Atu3031 +0.8 1.8 hypothetical protein compare
Atu0413 +0.8 2.5 stress induced protein compare
Atu3794 +0.8 5.1 FadR family transcriptional regulator compare
Atu0553 +0.8 4.3 flagellar hook-basal body complex protein compare
Atu5121 +0.8 6.3 two component response regulator compare
Atu3792 +0.8 4.7 L-asparagine permease compare
Atu4897 +0.8 1.5 hypothetical protein compare
Atu4677 +0.8 1.7 hypothetical protein compare
Atu0419 +0.7 2.5 two component sensor kinase compare
Atu2209 +0.7 3.6 pyrroline-5-carboxylate reductase compare
Atu1573 +0.7 1.6 hypothetical protein compare
Atu2020 +0.7 1.9 transcriptional regulator, TetR family compare
Atu0572 +0.6 3.1 hypothetical protein compare
Atu3791 +0.6 4.4 L-asparaginase compare
Atu4589 +0.6 2.2 transmembrane transport protein compare
Atu3001 +0.6 1.3 hypothetical protein compare
Atu8087 +0.6 1.2 putative peptidoglycan binding protein compare
Atu0549 +0.5 3.2 hypothetical protein compare
Atu0569 +0.5 4.5 flagellar motor protein, PAL/OmpA family compare
Atu0105 +0.5 1.6 hypothetical protein compare
Atu1039 +0.5 2.5 DNA repair protein RecO compare
Atu1026 +0.5 1.9 hypothetical protein compare
Atu3759 +0.5 1.3 hypothetical protein compare
Atu4068 +0.5 1.5 sarcosine oxidase delta subunit compare
Atu1865 +0.5 2.8 hypothetical protein compare
Atu5475 +0.5 2.3 hypothetical protein compare
Atu0662 +0.5 2.1 transcriptional regulator, GntR family compare
Atu2433 +0.5 1.0 hypothetical protein compare
Atu0547 +0.5 3.0 flagellar protein compare
Atu0559 +0.5 3.3 hypothetical protein compare
Atu0568 +0.5 3.7 hypothetical protein compare
Atu8132 +0.5 2.6 hypothetical protein compare
Atu0561 +0.5 3.7 flagellar motor switch protein compare
Atu4894 +0.5 2.6 transposase compare
Atu0026 +0.5 0.8 hypothetical protein compare
Atu3506 +0.5 1.7 hypothetical protein compare
Atu0555 +0.5 3.8 flagellar basal-body rod protein FlgB compare
Atu0545 +0.4 3.2 flagella associated protein compare
Atu5034 +0.4 1.6 hypothetical protein compare
Atu1847 +0.4 1.1 hypothetical protein compare
Atu0225 +0.4 0.7 hypothetical protein compare
Atu0564 +0.4 3.5 flagellar biosynthetic protein compare
Atu2135 +0.4 1.8 transcriptional regulator, TetR family compare
Atu0580 +0.4 1.2 flagellar biosynthetic protein compare
Atu1570 +0.4 0.7 hypothetical protein compare
Atu0557 +0.4 3.5 flagellum-specific ATP synthase compare
Atu3667 +0.4 2.2 aspartate alpha-decarboxylase compare
Atu2025 +0.4 2.1 transcriptional regulator compare
Atu3006 +0.4 1.6 hypothetical protein compare
Atu4509 +0.4 2.3 hypothetical protein compare
Atu2534 +0.4 1.7 outer membrane protein compare
Atu3467 +0.4 1.3 hypothetical protein compare
Atu0546 +0.4 2.8 flagellar biosynthetic protein compare
Atu0550 +0.4 3.1 flagellar P-ring protein precursor compare
Atu1694 +0.4 1.8 hypothetical protein compare
Atu2063 +0.4 1.1 hypothetical protein compare
Atu0582 +0.4 3.1 flagellar biosynthetic protein FLIR compare
Atu0548 +0.4 3.1 flagellar L-ring protein precursor compare
Atu0523 +0.4 2.9 flagellar M-ring protein compare
Atu1581 +0.4 1.3 hypothetical protein compare
Atu1836 +0.4 0.9 hypothetical protein compare
Atu0912 +0.4 0.7 Na+/H+ antiporter compare
Atu2193 +0.4 0.6 hypothetical protein compare
Atu8181 +0.4 2.1 hypothetical protein compare
Atu0551 +0.4 1.2 flagellar protein FLGA precursor compare
Atu0570 +0.4 3.1 Chemotaxis protein compare
Atu8202 +0.4 1.7 hypothetical protein compare
Atu4452 +0.4 2.1 hypothetical protein compare
Atu6149 +0.4 1.7 hypothetical protein compare
Atu1660 +0.4 1.8 hypothetical protein compare
Atu0612 +0.4 1.0 ABC transporter, membrane spanning protein compare
Atu4498 +0.4 2.3 hypothetical protein compare
Atu0328 +0.4 2.8 heat-inducible transcription repressor compare
Atu1149 +0.4 0.9 adenylate cyclase compare
Atu0581 +0.4 3.0 flagellar biosynthesis protein compare
Atu1466 +0.4 1.0 hypothetical protein compare
Atu8156 +0.4 2.0 hypothetical protein compare
Atu1371 +0.4 1.9 glycerophosphoryl diester phosphodiesterase compare
Atu0563 +0.4 2.7 flagellar motor switch protein FliG compare
Atu2077 +0.3 1.1 DNA polymerase III, epsilon subunit compare
Atu0236 +0.3 1.1 hypothetical protein compare
Atu4050 +0.3 1.7 UTP-glucose-1-phosphate uridylyltransferase compare
Atu0279 +0.3 1.9 transcriptional regulator, TetR family compare
Atu2216 +0.3 2.4 Xaa-Pro dipeptidase compare
Atu1185 +0.3 1.1 hypothetical protein compare
Atu4266 +0.3 2.5 GntR family transcriptional regulator compare
Atu0558 +0.3 2.3 flagellar basal body rod protein compare
Atu1127 +0.3 1.3 molybdopterin converting factor small subunit compare
Atu1629 +0.3 0.7 transcriptional regulator, ArsR family compare
Atu1952 +0.3 0.8 hypothetical protein compare
Atu1896 +0.3 1.7 hypothetical protein compare
Atu4198 +0.3 1.5 hypothetical protein compare
Atu0976 +0.3 0.9 cycL protein compare
Atu1005 +0.3 1.5 hypothetical protein compare
Atu5095 +0.3 2.0 hypothetical protein compare
Atu4070 +0.3 1.7 sarcosine oxidase gamma subunit compare
Atu5467 +0.3 1.2 hypothetical protein compare
Atu1722 +0.3 1.6 hypothetical protein compare
Atu1301 +0.3 1.6 hypothetical protein compare
Atu1366 +0.3 1.2 hypothetical protein compare
Atu0746 +0.3 1.4 hypothetical protein compare
Atu1756 +0.3 1.5 hypothetical protein compare
Atu3074 +0.3 1.9 short chain dehydrogenase compare
Atu0485 +0.3 1.3 hypothetical protein compare
Atu6138 +0.3 2.3 Repressor of the acc and arc operons compare
Atu0566 +0.3 0.7 hypothetical protein compare
Atu4345 +0.3 1.3 hypothetical protein compare
Atu4145 +0.3 2.2 hypothetical protein compare
Atu2391 +0.3 2.2 ABC transporter, substrate binding protein (nitrate/sulfonate/taurine/bicarbonate) compare
Atu3122 +0.3 1.0 cold shock protein compare
Atu1150 +0.3 1.9 hypothetical protein compare
Atu2768 +0.3 1.3 hypothetical protein compare
Atu3270 +0.3 1.2 hypothetical protein compare
Atu0579 +0.3 1.7 hook formation protein compare
Atu0552 +0.3 2.3 flagellar basal-body rod protein compare
Atu2407 +0.3 1.6 urease gamma subunit compare
Atu2787 +0.3 0.3 hypothetical protein compare
Atu2380 +0.3 1.1 hypothetical protein compare
Atu6159 +0.3 1.3 hypothetical protein compare
Atu0878 +0.3 1.5 hypothetical protein compare
Atu0824 +0.3 0.6 hypothetical protein compare
Atu0781 +0.3 1.5 hypothetical protein compare
Atu0109 +0.3 1.4 transcriptional regulator, MarR family compare
Atu5046 +0.3 1.4 hypothetical protein compare
Atu5045 +0.3 0.9 hypothetical protein compare
Atu5513 +0.3 0.9 cold shock protein compare
Atu1818 +0.3 1.2 hypothetical protein compare
Atu3807 +0.3 1.3 AsnC family transcriptional regulator compare
Atu2120 +0.3 1.5 O-methyltransferase compare
Atu1871 +0.3 1.7 glutathione S-transferase compare
Atu2145 +0.3 2.1 transcriptional regulator, RpiR family compare
Atu0733 +0.3 2.0 enoyl-CoA hydratase/isomerase compare
Atu0924 +0.3 1.8 hypothetical protein compare
Atu1525 +0.3 1.2 hypothetical protein compare
Atu0560 +0.3 2.5 flagellar motor protein compare
Atu2248 +0.3 1.5 hypothetical protein compare
Atu5106 +0.3 1.4 DNA binding protein compare
Atu4171 +0.3 1.9 cold-shock dead-box protein A compare
Atu2286 +0.3 0.8 hypothetical protein compare
Atu5468 +0.3 0.9 hypothetical protein compare
Atu8190 +0.3 1.8 hypothetical protein compare
Atu8197 +0.3 1.6 NorF protein compare
Atu1291 +0.3 0.5 hypothetical protein compare
Atu1052 +0.3 0.8 hypothetical protein compare
Atu3096 +0.3 2.2 sn-glycerol 3-phosphate ABC transporter substrate-binding protein compare
Atu8120 +0.3 2.1 hypothetical protein compare
Atu0583 +0.3 1.3 hypothetical protein compare
Atu0562 +0.3 0.9 flagellar motor switch protein FliN compare
Atu1241 +0.3 0.8 hypothetical protein compare
Atu3497 +0.3 1.2 hypothetical protein compare
Atu2417 +0.3 1.5 putative gluconate 5-dehydrogenase compare
Atu5437 +0.3 1.6 hypothetical protein compare
Atu0427 +0.3 0.8 hypothetical protein compare
Atu3808 +0.3 1.6 LysR family transcriptional regulator compare
Atu4023 +0.3 1.7 ferrichrome ABC transporter substrate-binding protein compare
Atu2753 +0.3 2.2 ATP-dependent helicase compare
Atu0573 +0.3 1.9 transcriptional regulator compare
Atu4811 +0.3 2.2 UDP-phosphate alpha N-acetylglucosaminyltransferase compare
Atu2262 +0.3 1.6 hypothetical protein compare
Atu0802 +0.3 1.8 hypothetical protein compare
Atu0857 +0.3 1.5 oxidoreductase compare
Atu3080 +0.3 2.2 hypothetical protein compare
Atu1018 +0.3 1.5 hypothetical protein compare
Atu6053 +0.3 1.6 conserved hypothetical protein compare
Atu3728 +0.3 1.6 hypothetical protein compare
Atu0953 +0.3 0.5 hypothetical protein compare
Atu6112 +0.3 1.7 conserved hypothetical protein compare
Atu0574 +0.3 2.3 flagellar hook protein compare
Atu0575 +0.3 2.3 flagellar hook associated protein compare
Atu3437 +0.3 1.8 oligopeptide ABC transporter ATPase compare
Atu4160 +0.3 1.2 RNA polymerase sigma factor compare
Atu6107 +0.3 1.7 hypothetical protein compare
Atu8019 +0.3 1.2 hypothetical protein compare
Atu4648 +0.3 1.9 choline sulfatase compare
Atu3387 +0.3 1.0 sigma factor compare
Atu0430 +0.3 1.8 chaperonin (heat shock protein hsp33) compare
Atu4366 +0.3 1.6 short chain dehydrogenase compare
Atu3926 +0.3 1.0 translation initiation inhibitor compare
Atu2464 +0.3 0.9 formyltetrahydrofolate deformylase compare
Atu3809 +0.3 1.5 oxidoreductase compare
Atu0571 +0.3 2.0 chemotaxis MotD protein compare
Atu2777 +0.3 1.6 hypothetical protein compare
Atu0051 +0.3 1.4 two component sensor kinase compare
Atu0904 +0.3 0.9 hypothetical protein compare
Atu1857 +0.3 1.5 inositol monophosphatase family protein compare
Atu5142 +0.3 0.5 hypothetical protein compare
Atu1184 +0.3 0.8 hypothetical protein compare
Atu1888 +0.3 2.0 two component sensor kinase compare
Atu1851 +0.3 0.9 BolA/YrbA family protein compare
Atu4242 +0.3 1.6 hypothetical protein compare
Atu6123 +0.3 1.5 conserved hypothetical protein compare
Atu0284 +0.3 1.8 tryptophan-rich sensory protein compare
Atu4035 +0.2 1.5 two component response regulator compare
Atu4605 +0.2 1.3 IS3 family transposase compare
Atu1418 +0.2 1.6 methylenetetrahydrofolate reductase compare
Atu1147 +0.2 1.2 hypothetical protein compare
Atu4033 +0.2 2.0 sugar ABC transporter substrate-binding protein compare


Specific Phenotypes

For 15 genes in this experiment

For carbon source Beta-alanine in Agrobacterium fabrum C58

For carbon source Beta-alanine across organisms