Experiment set10IT096 for Agrobacterium fabrum C58

Compare to:

Ferulic Acid carbon source

200 most detrimental genes:

  gene name fitness t score description  
Atu4226 +1.3 9.1 transcriptional regulator compare
Atu3001 +0.9 2.1 hypothetical protein compare
Atu3494 +0.9 4.1 hypothetical protein compare
Atu1223 +0.9 1.2 hypothetical protein compare
Atu1968 +0.9 2.3 hypothetical protein compare
Atu1573 +0.8 1.7 hypothetical protein compare
Atu0755 +0.8 2.1 hypothetical protein compare
Atu3468 +0.8 1.0 hypothetical protein compare
Atu0824 +0.8 1.7 hypothetical protein compare
Atu1847 +0.8 1.8 hypothetical protein compare
Atu4897 +0.8 1.5 hypothetical protein compare
Atu0236 +0.7 2.5 hypothetical protein compare
Atu4144 +0.7 1.2 hypothetical protein compare
Atu0525 +0.7 3.7 transcriptional regulator, LuxR family compare
Atu4290 +0.7 1.7 hypothetical protein compare
Atu2582 +0.7 4.1 UDP-glucose/GDP-mannose dehydrogenase compare
Atu1629 +0.7 1.6 transcriptional regulator, ArsR family compare
Atu0050 +0.7 3.9 two component response regulator compare
Atu0594 +0.7 5.7 alpha-glucosidase compare
Atu2577 +0.7 5.7 ABC transporter, nucleotide binding/ATPase protein compare
Atu3036 +0.7 3.8 dipeptide ABC transporter permease compare
Atu2591 +0.7 5.1 glucosyltransferase compare
Atu2234 +0.7 2.3 hypothetical protein compare
Atu0142 +0.6 2.1 cytochrome o ubiquinol oxidase subunit II compare
Atu0592 +0.6 4.6 ABC transporter, membrane spanning protein compare
Atu1219 +0.6 1.3 hypothetical protein compare
Atu1550 +0.6 3.7 polypeptide deformylase compare
Atu0524 +0.6 3.8 transcriptional regulator, LuxR family compare
Atu0595 +0.6 4.6 ABC transporter, nucleotide binding/ATPase protein compare
Atu4149 +0.6 4.6 UDP-glucose 6-dehydrogenase compare
Atu0591 +0.6 5.1 ABC transporter, substrate binding protein (alpha-glucoside) compare
Atu4677 +0.6 0.8 hypothetical protein compare
Atu0141 +0.6 1.4 cytochrome O ubiquinol oxidase subunit I compare
Atu1291 +0.6 1.2 hypothetical protein compare
Atu2585 +0.6 3.6 hypothetical protein compare
Atu1301 +0.6 2.5 hypothetical protein compare
Atu2583 +0.5 4.2 glycosyltransferase compare
Atu2590 +0.5 4.4 hypothetical protein compare
Atu1026 +0.5 1.3 hypothetical protein compare
Atu3012 +0.5 1.0 hypothetical protein compare
Atu3911 +0.5 3.7 hypothetical protein compare
Atu3006 +0.5 2.0 hypothetical protein compare
Atu3510 +0.5 2.0 amidohydrolase compare
Atu0063 +0.5 1.8 ABC transporter, substrate binding protein (sugar) compare
Atu3926 +0.5 1.8 translation initiation inhibitor compare
Atu1241 +0.5 2.2 hypothetical protein compare
Atu1333 +0.5 2.3 outer membrane protein compare
Atu0593 +0.5 2.5 ABC transporter, membrane spanning protein compare
Atu4162 +0.5 3.0 two-component response regulator compare
Atu2335 +0.5 0.7 hypothetical protein compare
Atu1314 +0.5 2.6 transcriptional regulator, TetR family compare
Atu8012 +0.5 0.9 hypothetical protein compare
Atu1503 +0.5 0.9 hypothetical protein compare
Atu0124 +0.5 2.5 hypothetical protein compare
Atu1130 +0.5 3.0 dehydrogenase compare
Atu0780 +0.5 3.5 hypothetical protein compare
Atu1184 +0.5 1.2 hypothetical protein compare
Atu1858 +0.5 2.5 hypothetical protein compare
Atu0786 +0.5 2.8 peptidase, family M16 compare
Atu4524 +0.4 3.0 oligopeptide ABC transporter permease compare
Atu2657 +0.4 1.4 hypothetical protein compare
Atu8180 +0.4 3.4 hypothetical protein compare
Atu8156 +0.4 1.5 hypothetical protein compare
Atu3005 +0.4 0.8 hypothetical protein compare
Atu3329 +0.4 2.6 beta alanine--pyruvate transaminase compare
Atu8195 +0.4 1.5 hypothetical protein compare
Atu2669 +0.4 2.6 RhtB family transporter compare
Atu0435 +0.4 0.9 tRNA-Gly compare
Atu1725 +0.4 1.2 hypothetical protein compare
Atu4516 +0.4 2.8 branched chain amino acid ABC transporter ATPase compare
Atu0386 +0.4 1.2 hypothetical protein compare
Atu0925 +0.4 1.2 hypothetical protein compare
Atu1871 +0.4 2.1 glutathione S-transferase compare
Atu4083 +0.4 1.9 aldose epimerase compare
Atu5169 +0.4 2.1 type IV secretion protein AvhB8 compare
Atu0135 +0.4 0.9 uracil phosphoribosyltransferase compare
Atu3447 +0.4 2.6 hypothetical protein compare
Atu3052 +0.4 1.6 MarR family transcriptional regulator compare
Atu3017 +0.4 0.8 phosphoglyceromutase compare
Atu0997 +0.4 1.4 hypothetical protein compare
Atu4228 +0.4 2.0 formyl-methanofuran dehydrogenase compare
Atu1444 +0.4 2.9 nitrogen regulation protein compare
Atu3032 +0.4 1.9 hypothetical protein compare
Atu1849 +0.4 1.5 hypothetical protein compare
Atu0795 +0.4 0.7 hypothetical protein compare
Atu1005 +0.4 0.8 hypothetical protein compare
Atu5121 +0.4 3.1 two component response regulator compare
Atu1501 +0.4 1.7 hypothetical protein compare
Atu2084 +0.4 0.4 hypothetical protein compare
Atu6165 +0.4 0.6 hypothetical protein compare
Atu2063 +0.4 1.2 hypothetical protein compare
Atu0672 +0.4 2.2 transcriptional regulator, LysR family compare
Atu8150 +0.4 1.9 hypothetical protein compare
Atu0772 +0.4 2.3 hypothetical protein compare
Atu4369 +0.4 2.0 sugar ABC transporter substrate-binding protein compare
Atu4523 +0.4 2.0 oligopeptide ABC transporter permease compare
Atu0051 +0.4 1.9 two component sensor kinase compare
Atu1160 +0.4 1.1 hypothetical protein compare
Atu4686 +0.4 1.3 hypothetical protein compare
Atu3076 +0.4 1.7 uracil transport protein compare
Atu0612 +0.4 1.0 ABC transporter, membrane spanning protein compare
Atu2634 +0.4 0.8 hypothetical protein compare
Atu2592 +0.4 2.0 hypothetical protein compare
Atu3442 +0.4 2.5 oligopeptide ABC transporter substrate-binding protein compare
Atu1480 +0.4 1.3 hypothetical protein compare
Atu1534 +0.4 2.3 cytochrome-c oxidase, FixP chain compare
Atu4133 +0.4 1.2 hypothetical protein compare
Atu4167 +0.4 2.0 hypothetical protein compare
Atu2491 +0.4 1.2 hypothetical protein compare
Atu3775 +0.4 1.2 hypothetical protein compare
Atu5513 +0.3 0.6 cold shock protein compare
Atu2044 +0.3 1.3 HFLC protein compare
Atu4371 +0.3 2.5 sugar ABC transporter permease compare
Atu0115 +0.3 0.6 hypothetical protein compare
Atu2368 +0.3 0.7 hypothetical protein compare
Atu4237 +0.3 1.7 hypothetical protein compare
Atu2208 +0.3 1.6 secretion chaperone compare
Atu2571 +0.3 2.0 acyl carrier protein, putative compare
Atu4527 +0.3 0.8 hypothetical protein compare
Atu2578 +0.3 1.1 cAMP-dependent protein kinase regulatory subunit compare
Atu4753 +0.3 1.2 amino acid ABC transporter permease compare
Atu4476 +0.3 2.4 hypothetical protein compare
Atu3297 +0.3 2.2 two component sensor kinase for C4-dicarboxylate transport compare
Atu3506 +0.3 1.6 hypothetical protein compare
Atu4398 +0.3 2.2 hypothetical protein compare
Atu1782 +0.3 1.5 hypothetical protein compare
Atu0553 +0.3 2.5 flagellar hook-basal body complex protein compare
Atu2584 +0.3 1.7 hypothetical protein compare
Atu8029 +0.3 0.8 hypothetical protein compare
Atu1607 +0.3 1.2 DNA repair protein compare
Atu4515 +0.3 1.7 branched chain amino acid ABC transporter ATPase compare
Atu0093 +0.3 1.2 Recombination protein compare
Atu0162 +0.3 1.4 biopolymer transport protein compare
Atu0680 +0.3 1.4 hypothetical protein compare
Atu4306 +0.3 1.4 two component response regulator compare
Atu2293 +0.3 1.0 hypothetical protein compare
Atu3071 +0.3 1.6 hypothetical protein compare
Atu8200 +0.3 1.5 hypothetical protein compare
Atu2282 +0.3 1.8 thymidine kinase compare
Atu2221 +0.3 1.1 Lipid A biosynthesis protein compare
Atu0504 +0.3 2.1 hypothetical protein compare
Atu4221 +0.3 2.0 hypothetical protein compare
Atu0976 +0.3 0.9 cycL protein compare
Atu5045 +0.3 0.8 hypothetical protein compare
Atu1855 +0.3 2.3 MFS permease compare
Atu0551 +0.3 1.3 flagellar protein FLGA precursor compare
Atu3428 +0.3 1.3 hypothetical protein compare
Atu0926 +0.3 1.5 hypothetical protein compare
Atu6104 +0.3 1.4 conserved hypothetical protein compare
Atu1565 +0.3 1.4 serine acetyltransferase compare
Atu5444 +0.3 1.8 short-chain dehydrogenase compare
Atu2518 +0.3 2.5 ABC transporter, substrate binding protein (dipeptide) compare
Atu3070 +0.3 2.5 allantoate amidohydrolase compare
Atu1325 +0.3 1.0 acetyltransferase compare
Atu0583 +0.3 1.9 hypothetical protein compare
Atu1568 +0.3 1.6 transcriptional regulator, TetR family compare
Atu1398 +0.3 1.6 ABC transporter, membrane spanning protein (amino acid) compare
Atu0703 +0.3 1.0 keto-hydroxyglutarate-aldolase/keto-deoxy- phosphogluconate aldolase compare
Atu5549 +0.3 1.5 hypothetical protein compare
Atu1293 +0.3 1.4 hypothetical protein compare
Atu0185 +0.3 1.5 methylglyoxal synthase compare
Atu3235 +0.3 1.6 hypothetical protein compare
Atu4662 +0.3 2.1 oligopeptide ABC transporter permease compare
Atu3169 +0.3 1.0 sorbitol/mannitol ABC transporter permease compare
Atu5471 +0.3 0.9 hypothetical protein compare
Atu4585 +0.3 1.4 hypothetical protein compare
Atu5538 +0.3 1.7 hypothetical protein compare
Atu2420 +0.3 1.9 hypothetical protein compare
Atu0211 +0.3 1.8 hypothetical protein compare
Atu3267 +0.3 1.1 dipeptide ABC transporter permease compare
Atu3712 +0.3 0.6 hypothetical protein compare
Atu1232 +0.3 0.6 hypothetical protein compare
Atu3203 +0.3 1.3 RND multidrug efflux membrane permease compare
Atu0558 +0.3 1.9 flagellar basal body rod protein compare
Atu5449 +0.3 1.4 heat-shock protein compare
Atu4041 +0.3 1.6 ribosomal large subunit pseudouridine synthase A compare
Atu6033 +0.3 1.6 conjugal transfer protein compare
Atu8038 +0.3 1.9 hypothetical protein compare
Atu6146 +0.3 2.0 conserved hypothetical protein compare
Atu0557 +0.3 2.2 flagellum-specific ATP synthase compare
Atu0630 +0.3 1.0 hypothetical protein compare
Atu3789 +0.3 1.8 potassium-transporting ATPase subunit B compare
Atu8197 +0.3 1.2 NorF protein compare
Atu0535 +0.3 1.2 hypothetical protein compare
Atu2789 +0.3 1.5 hypothetical protein compare
Atu1682 +0.3 2.0 hypothetical protein compare
Atu2339 +0.3 2.3 hypothetical protein compare
Atu3780 +0.3 1.3 hypothetical protein compare
Atu4092 +0.3 1.7 cytochrome d oxidase subunit II compare
Atu5106 +0.3 1.4 DNA binding protein compare
Atu0805 +0.3 1.6 hypothetical protein compare
Atu4155 +0.3 1.5 aliphatic sulfonate ABC transporter permease compare
Atu4665 +0.3 1.3 alpha-galactosidase compare
Atu4779 +0.3 0.7 hypothetical protein compare
Atu3491 +0.3 0.8 hypothetical protein compare
Atu4033 +0.3 2.0 sugar ABC transporter substrate-binding protein compare
Atu1702 +0.3 1.3 stationary-phase survival protein compare
Atu0935 +0.3 1.8 hypothetical protein compare
Atu4894 +0.3 1.3 transposase compare
Atu4490 +0.3 2.1 diguanylate cyclase compare


Specific Phenotypes

For 12 genes in this experiment

For carbon source Ferulic Acid in Agrobacterium fabrum C58

For carbon source Ferulic Acid across organisms