Experiment set10IT088 for Escherichia coli BW25113

Compare to:

LB Anaerobic with Vancomycin Hydrochloride from Streptomyces orientalis 0.00003125 mM

Genes with specific phenotypes:

  gene name fitness t score description  
b4472 yhdP -4.9 -14.2 conserved membrane protein, predicted transporter (NCBI) compare
b4221 ytfN -4.9 -17.0 hypothetical protein (NCBI) compare
b4220 ytfM -4.3 -13.0 predicted outer membrane protein and surface antigen (NCBI) compare
b2435 amiA -3.7 -5.6 N-acetylmuramoyl-l-alanine amidase I (NCBI) compare
b3196 yrbG -3.5 -10.0 predicted calcium/sodium:proton antiporter (NCBI) compare
b3928 yiiU -3.2 -7.4 hypothetical protein (NCBI) compare
b3963 fabR -3.0 -10.6 DNA-binding transcriptional repressor (RefSeq) compare
b1249 cls -2.8 -7.2 cardiolipin synthetase (NCBI) compare
b3687 ibpA -2.7 -7.4 heat shock chaperone (NCBI) compare
b3409 feoB -2.6 -16.6 ferrous iron transport protein B (NCBI) compare
b3150 yraP -2.5 -6.6 hypothetical protein (NCBI) compare
b3408 feoA -2.4 -10.8 ferrous iron transport protein A (NCBI) compare
b0381 ddlA -2.4 -6.8 D-alanylalanine synthetase (NCBI) compare
b0847 ybjL -2.3 -8.5 hypothetical protein (NCBI) compare
b3166 truB -2.2 -7.5 tRNA pseudouridine synthase B (NCBI) compare
b2517 yfgB -2.2 -6.5 predicted enzyme (NCBI) compare
b3554 yiaF -2.2 -10.0 orf, hypothetical protein (VIMSS) compare
b3740 gidB -2.1 -8.7 glucose-inhibited division protein B (NCBI) compare
b2242 glpB -2.0 -7.4 anaerobic glycerol-3-phosphate dehydrogenase subunit B (NCBI) compare
b3197 kdsD -1.9 -6.0 D-arabinose 5-phosphate isomerase (NCBI) compare
b2896 ygfX -1.9 -5.3 hypothetical protein (NCBI) compare
b0434 yajG -1.9 -5.5 putative polymerase/proteinase (VIMSS) compare
b2241 glpA -1.7 -8.2 sn-glycerol-3-phosphate dehydrogenase (anaerobic), large subunit, FAD/NAD(P)-binding (NCBI) compare
b2243 glpC -1.6 -5.6 sn-glycerol-3-phosphate dehydrogenase (anaerobic), small subunit (NCBI) compare
b0868 b0868 -1.4 -6.1 putative nucleotide di-P-sugar epimerase or dehydratase (VIMSS) compare
b3529 yhjK -1.4 -8.3 predicted diguanylate cyclase (RefSeq) compare
b0939 ycbR -1.3 -5.5 predicted periplasmic pilin chaperone (NCBI) compare
b4049 dusA -1.3 -5.2 tRNA-dihydrouridine synthase A (RefSeq) compare
b3391 hofQ -1.3 -5.1 predicted fimbrial transporter (NCBI) compare
b4022 yjbC -1.3 -6.2 23S rRNA pseudouridine synthase (NCBI) compare
b3416 malQ -1.2 -7.5 4-alpha-glucanotransferase (amylomaltase) (NCBI) compare
b2260 menE +1.0 6.7 O-succinylbenzoic acid--CoA ligase (NCBI) compare
b1047 mdoC +1.1 6.9 glucans biosynthesis protein (NCBI) compare
b3788 rffG +1.1 5.1 dTDP-glucose 4,6-dehydratase (NCBI) compare
b1833 yebS +1.1 5.4 conserved inner membrane protein (NCBI) compare
b2261 menC +1.1 5.1 O-succinylbenzoate synthase (NCBI) compare
b4392 slt +1.2 9.2 soluble lytic murein transglycosylase (VIMSS) compare
b2836 aas +1.2 8.7 2-acyl-glycerophospho-ethanolamine acyltransferase (NCBI) compare
b2835 ygeD +1.2 7.3 predicted inner membrane protein (NCBI) compare
b2298 yfcC +1.3 7.7 putative S-transferase (VIMSS) compare
b3207 yrbL +1.3 5.5 hypothetical protein (NCBI) compare
b3289 rsmB +1.3 9.8 16S rRNA m5C967 methyltransferase, S-adenosyl-L-methionine-dependent (NCBI) compare
b2132 bglX +1.3 8.9 beta-D-glucoside glucohydrolase, periplasmic (NCBI) compare
b3009 yghB +1.3 5.6 conserved inner membrane protein (NCBI) compare
b1805 fadD +1.4 9.4 acyl-CoA synthase (NCBI) compare
b1349 recT +1.6 6.9 Rac prophage; recombination and repair protein (NCBI) compare
b2134 pbpG +1.6 9.4 penicillin-binding protein 7 (VIMSS) compare
b0125 hpt +1.9 9.8 hypoxanthine phosphoribosyltransferase (VIMSS) compare
b2092 gatC +1.9 7.4 galactitol-specific enzyme IIC component of PTS (NCBI) compare
b4359 mdoB +2.0 16.2 phosphoglycerol transferase I (VIMSS) compare
b3688 yidQ +2.0 8.8 orf, hypothetical protein (VIMSS) compare
b2095 gatZ +2.0 8.5 D-tagatose 1,6-bisphosphate aldolase 2, subunit (NCBI) compare
b1220 ychO +2.1 9.3 predicted invasin (RefSeq) compare
b3785 wzzE +2.1 9.3 putative transport protein (VIMSS) compare
b4558 yifL +2.1 6.5 predicted lipoprotein (NCBI) compare
b1097 yceG +3.0 18.6 predicted aminodeoxychorismate lyase (NCBI) compare


Specific phenotypes for stress Vancomycin Hydrochloride from Streptomyces orientalis across organisms