| | gene | name | fitness | t score | description | |
|---|
| b1105 | ycfM | -6.4 | -4.4 | predicted outer membrane lipoprotein (NCBI) | compare |
| b4392 | slt | -5.0 | -14.6 | soluble lytic murein transglycosylase (VIMSS) | compare |
| b0149 | mrcB | -4.7 | -7.2 | penicillin-binding protein 1b (NCBI) | compare |
| b1334 | fnr | -4.1 | -2.8 | DNA-binding transcriptional dual regulator, global regulator of anaerobic growth (NCBI) | compare |
| b4237 | nrdG | -3.9 | -10.2 | anaerobic ribonucleotide reductase activating protein (NCBI) | compare |
| b4025 | pgi | -3.3 | -8.0 | glucose-6-phosphate isomerase (NCBI) | compare |
| b4238 | nrdD | -3.3 | -17.3 | anaerobic ribonucleoside triphosphate reductase (NCBI) | compare |
| b0740 | tolB | -3.2 | -2.2 | translocation protein TolB precursor (NCBI) | compare |
| b0741 | pal | -3.1 | -2.1 | peptidoglycan-associated outer membrane lipoprotein (NCBI) | compare |
| b1192 | ldcA | -3.1 | -5.2 | L,D-carboxypeptidase A (NCBI) | compare |
| b0053 | surA | -2.8 | -3.4 | peptidyl-prolyl cis-trans isomerase (PPIase) (NCBI) | compare |
| b1361 | ydaW | -2.8 | -1.6 | orf, hypothetical protein (VIMSS) | compare |
| b3792 | wzxE | -2.7 | -5.2 | O-antigen translocase (NCBI) | compare |
| b0902 | pflA | -2.6 | -7.4 | pyruvate formate lyase activating enzyme 1 (NCBI) | compare |
| b2168 | fruK | -2.5 | -1.7 | 1-phosphofructokinase (NCBI) | compare |
| b2512 | yfgL | -2.5 | -6.1 | protein assembly complex, lipoprotein component (NCBI) | compare |
| b4053 | alr | -2.5 | -8.7 | alanine racemase (NCBI) | compare |
| b0737 | tolQ | -2.5 | -1.7 | membrane spanning protein in TolA-TolQ-TolR complex (NCBI) | compare |
| b0739 | tolA | -2.4 | -1.7 | cell envelope integrity inner membrane protein TolA (NCBI) | compare |
| b4520 | ymgF | -2.3 | -1.5 | hypothetical protein (NCBI) | compare |
| b3443 | yrhA | -2.3 | -2.2 | orf, hypothetical protein (VIMSS) | compare |
| b1575 | dicB | -2.2 | -2.0 | Qin prophage; cell division inhibition protein (NCBI) | compare |
| b3839 | tatC | -2.2 | -6.5 | TatABCE protein translocation system subunit (NCBI) | compare |
| b2330 | yfcB | -2.2 | -1.5 | putative adenine-specific methylase (VIMSS) | compare |
| b1476 | fdnI | -2.2 | -1.7 | formate dehydrogenase-N, cytochrome B556 (gamma) subunit, nitrate-inducible (NCBI) | compare |
| b0239 | frsA | -2.2 | -9.2 | fermentation/respiration switch protein (NCBI) | compare |
| b0730 | mngR | -2.0 | -1.4 | DNA-binding transcriptional dual regulator, fatty-acyl-binding (NCBI) | compare |
| b0990 | cspG | -2.0 | -1.8 | DNA-binding transcriptional regulator (NCBI) | compare |
| b3620 | rfaF | -2.0 | -5.0 | ADP-heptose:LPS heptosyltransferase II (NCBI) | compare |
| b2531 | iscR | -1.9 | -1.5 | DNA-binding transcriptional repressor (NCBI) | compare |
| b3390 | aroK | -1.9 | -2.2 | shikimate kinase I (NCBI) | compare |
| b4592 | yccB | -1.9 | -2.5 | hypothetical protein (RefSeq) | compare |
| b0142 | folK | -1.9 | -1.0 | 2-amino-4-hydroxy-6-hydroxymethyldihyropteridine pyrophosphokinase (NCBI) | compare |
| b0433 | ampG | -1.9 | -13.3 | muropeptide transporter (NCBI) | compare |
| b0738 | tolR | -1.9 | -1.3 | membrane spanning protein in TolA-TolQ-TolR complex (NCBI) | compare |
| b0957 | ompA | -1.9 | -2.4 | outer membrane protein A (3a;II*;G;d) (NCBI) | compare |
| b2830 | nudH | -1.8 | -1.2 | dinucleoside polyphosphate hydrolase (NCBI) | compare |
| b2617 | smpA | -1.8 | -2.8 | small membrane protein A (VIMSS) | compare |
| b1176 | minC | -1.8 | -3.1 | septum formation inhibitor (NCBI) | compare |
| b1290 | sapF | -1.8 | -1.6 | predicted antimicrobial peptide transporter subunit (NCBI) | compare |
| b0903 | pflB | -1.8 | -10.1 | pyruvate formate lyase I (NCBI) | compare |
| b4402 | yjjY | -1.8 | -1.2 | hypothetical protein (NCBI) | compare |
| b0462 | acrB | -1.7 | -12.4 | multidrug efflux system protein (NCBI) | compare |
| b1882 | cheY | -1.7 | -0.9 | chemotaxis regulator transmitting signal to flagellar motor component (NCBI) | compare |
| b1530 | marR | -1.7 | -3.5 | multiple antibiotic resistance protein; repressor of mar operon (VIMSS) | compare |
| b3183 | obgE | -1.7 | -1.1 | GTPase involved in cell partioning and DNA repair (NCBI) | compare |
| b1567 | intK | -1.7 | -2.1 | Qin prophage; predicted protein (RefSeq) | compare |
| b1600 | mdtJ | -1.6 | -1.1 | multidrug efflux system transporter (NCBI) | compare |
| b3930 | menA | -1.6 | -10.9 | 1,4-dihydroxy-2-naphthoate octaprenyltransferase (NCBI) | compare |
| b0357 | yaiN | -1.5 | -2.3 | putative alpha helix chain (VIMSS) | compare |
| b3035 | tolC | -1.5 | -7.1 | outer membrane channel; specific tolerance to colicin E1; segregation of daughter chromosomes (VIMSS) | compare |
| b4181 | yjfI | -1.5 | -2.0 | hypothetical protein (NCBI) | compare |
| b0407 | yajC | -1.5 | -2.7 | preprotein translocase subunit YajC (NCBI) | compare |
| b0827 | moeA | -1.5 | -4.7 | molybdopterin biosynthesis protein (NCBI) | compare |
| b1861 | ruvA | -1.5 | -0.9 | Holliday junction DNA helicase motor protein (NCBI) | compare |
| b0381 | ddlA | -1.4 | -5.8 | D-alanylalanine synthetase (NCBI) | compare |
| b1850 | eda | -1.4 | -2.6 | keto-hydroxyglutarate-aldolase/keto-deoxy- phosphogluconate aldolase (NCBI) | compare |
| b3052 | rfaE | -1.4 | -4.1 | fused heptose 7-phosphate kinase/heptose 1-phosphate adenyltransferase (NCBI) | compare |
| b0014 | dnaK | -1.4 | -1.8 | molecular chaperone DnaK (NCBI) | compare |
| b0463 | acrA | -1.4 | -7.7 | multidrug efflux system (NCBI) | compare |
| b4603 | rseX | -1.4 | -1.0 | sRNA regulating ompA and ompC translation, with Hfq (RefSeq) | compare |
| b2363 | yfdT | -1.3 | -2.1 | CPS-53 (KpLE1) prophage; predicted protein (NCBI) | compare |
| b1865 | nudB | -1.3 | -1.5 | dATP pyrophosphohydrolase (NCBI) | compare |
| b3621 | rfaC | -1.3 | -4.1 | ADP-heptose:LPS heptosyl transferase I (NCBI) | compare |
| b1108 | ycfP | -1.3 | -3.1 | orf, hypothetical protein (VIMSS) | compare |
| b3838 | tatB | -1.3 | -5.0 | sec-independent translocase (NCBI) | compare |
| b2114 | metG | -1.3 | -2.0 | methionyl-tRNA synthetase (NCBI) | compare |
| b1332 | ynaJ | -1.3 | -0.8 | predicted inner membrane protein (NCBI) | compare |
| b4503 | yafF | -1.3 | -0.8 | no description | compare |
| b0765 | modC | -1.3 | -4.5 | molybdate transporter subunit (NCBI) | compare |
| b1013 | ycdC | -1.3 | -2.4 | predicted DNA-binding transcriptional regulator (NCBI) | compare |
| b1161 | ycgX | -1.2 | -0.8 | hypothetical protein (NCBI) | compare |
| b2567 | rnc | -1.2 | -0.8 | ribonuclease III (NCBI) | compare |
| b4701 | sokX | -1.2 | -1.1 | sok-related sRNA, function unknown (RefSeq) | compare |
| b2479 | gcvR | -1.2 | -3.8 | transcriptional regulation of gcv operon (VIMSS) | compare |
| b0949 | uup | -1.2 | -5.1 | fused predicted transporter subunits of ABC superfamily: ATP-binding components (NCBI) | compare |
| b1074 | flgC | -1.2 | -2.2 | flagellar basal-body rod protein C (NCBI) | compare |
| b4676 | yoaK | -1.2 | -0.7 | expressed protein (RefSeq) | compare |
| b1758 | b1758 | -1.2 | -1.4 | putative cytochrome oxidase (VIMSS) | compare |
| b1503 | ydeR | -1.2 | -2.1 | predicted fimbrial-like adhesin protein (NCBI) | compare |
| b0364 | yaiS | -1.2 | -2.1 | orf, hypothetical protein (VIMSS) | compare |
| b4630 | ykgP | -1.2 | -2.0 | no description | compare |
| b1506 | yneL | -1.2 | -0.7 | predicted transcriptional regulator (NCBI) | compare |
| b0145 | dksA | -1.1 | -2.6 | DNA-binding transcriptional regulator of rRNA transcription, DnaK suppressor protein (NCBI) | compare |
| b2576 | srmB | -1.1 | -2.1 | ATP-dependent RNA helicase (NCBI) | compare |
| b2935 | tktA | -1.1 | -0.8 | transketolase 1, thiamin-binding (NCBI) | compare |
| b4375 | prfC | -1.1 | -1.7 | peptide chain release factor 3 (NCBI) | compare |
| b1273 | yciN | -1.1 | -1.6 | hypothetical protein (NCBI) | compare |
| b0439 | lon | -1.1 | -3.3 | DNA-binding ATP-dependent protease La (NCBI) | compare |
| b1259 | yciG | -1.1 | -1.4 | orf, hypothetical protein (VIMSS) | compare |
| b3500 | gor | -1.1 | -1.2 | glutathione reductase (NCBI) | compare |
| b1370 | insH-5 | -1.1 | -2.1 | Rac prophage; IS5 transposase and trans-activator (NCBI) | compare |
| b3761 | trpT | -1.1 | -1.5 | tRNA-Trp (NCBI) | compare |
| b0564 | appY | -1.1 | -1.0 | DLP12 prophage; DNA-binding transcriptional activator (NCBI) | compare |
| b1874 | cutC | -1.1 | -1.8 | copper homeostasis protein (NCBI) | compare |
| b3619 | rfaD | -1.1 | -2.8 | ADP-L-glycero-D-mannoheptose-6-epimerase, NAD(P)-binding (NCBI) | compare |
| b1175 | minD | -1.1 | -2.7 | membrane ATPase of the MinC-MinD-MinE system (NCBI) | compare |
| b0450 | glnK | -1.1 | -1.6 | nitrogen assimilation regulatory protein for GlnL, GlnE, and AmtB (NCBI) | compare |
| b1730 | ydjO | -1.1 | -0.7 | predicted protein (RefSeq) | compare |
| b0386 | proC | -1.0 | -2.9 | pyrroline-5-carboxylate reductase (NCBI) | compare |
| b3857 | mobA | -1.0 | -3.4 | molybdopterin-guanine dinucleotide biosynthesis protein A (NCBI) | compare |
| b0783 | moaC | -1.0 | -3.6 | molybdenum cofactor biosynthesis protein C (NCBI) | compare |
| b1205 | ychH | -1.0 | -2.1 | predicted inner membrane protein (NCBI) | compare |
| b1677 | lpp | -1.0 | -1.7 | murein lipoprotein (NCBI) | compare |
| b3164 | pnp | -1.0 | -1.8 | polynucleotide phosphorylase/polyadenylase (RefSeq) | compare |
| b0434 | yajG | -1.0 | -3.9 | putative polymerase/proteinase (VIMSS) | compare |
| b2189 | proL | -1.0 | -1.6 | tRNA-Pro (NCBI) | compare |
| b3836 | b3836 | -1.0 | -3.2 | orf, hypothetical protein (VIMSS) | compare |
| b2642 | yfjW | -1.0 | -0.9 | CP4-57 prophage; predicted inner membrane protein (NCBI) | compare |
| b0826 | moeB | -1.0 | -4.1 | molybdopterin biosynthesis protein MoeB (NCBI) | compare |
| b3229 | sspA | -1.0 | -1.8 | stringent starvation protein A (NCBI) | compare |
| b2911 | ssrS | -1.0 | -1.5 | 6S regulatory RNA (NCBI) | compare |
| b3790 | rffC | -1.0 | -3.7 | TDP-fucosamine acetyltransferase (RefSeq) | compare |
| b1686 | ydiI | -1.0 | -1.6 | hypothetical protein (NCBI) | compare |
| b3199 | yrbK | -1.0 | -1.9 | hypothetical protein (NCBI) | compare |
| b1951 | rcsA | -0.9 | -0.6 | DNA-binding transcriptional activator, co-regulator with RcsB (NCBI) | compare |
| b1954 | dsrA | -0.9 | -1.6 | regulatory antisense RNA (NCBI) | compare |
| b3493 | pitA | -0.9 | -3.8 | phosphate transporter, low-affinity (NCBI) | compare |
| b3613 | yibP | -0.9 | -1.1 | putative membrane protein (VIMSS) | compare |
| b2506 | yfgI | -0.9 | -1.4 | hypothetical protein (NCBI) | compare |
| b1969 | yedW | -0.9 | -2.4 | putative 2-component transcriptional regulator (VIMSS) | compare |
| b2820 | recB | -0.9 | -0.8 | exonuclease V (RecBCD complex), beta subunit (NCBI) | compare |
| b2620 | smpB | -0.9 | -1.0 | SsrA-binding protein (NCBI) | compare |
| b4640 | yoeG | -0.9 | -1.2 | no description | compare |
| b1465 | narV | -0.9 | -1.9 | nitrate reductase 2 (NRZ), gamma subunit (NCBI) | compare |
| b3617 | kbl | -0.9 | -4.1 | 2-amino-3-ketobutyrate coenzyme A ligase (NCBI) | compare |
| b0728 | sucC | -0.9 | -3.3 | succinyl-CoA synthetase subunit beta (NCBI) | compare |
| b4146 | yjeK | -0.9 | -0.8 | predicted lysine aminomutase (NCBI) | compare |
| b3405 | ompR | -0.9 | -2.9 | osmolarity response regulator (NCBI) | compare |
| b0677 | nagA | -0.9 | -3.5 | N-acetylglucosamine-6-phosphate deacetylase (NCBI) | compare |
| b2215 | ompC | -0.9 | -4.9 | outer membrane porin protein C (NCBI) | compare |
| b0049 | apaH | -0.9 | -1.7 | diadenosinetetraphosphatase (NCBI) | compare |
| b4509 | ylcG | -0.9 | -1.9 | DLP12 prophage; predicted protein (NCBI) | compare |
| b4201 | priB | -0.9 | -1.7 | primosomal replication protein N (NCBI) | compare |
| b2572 | rseA | -0.9 | -3.0 | anti-sigma factor (NCBI) | compare |
| b1536 | ydeI | -0.9 | -0.6 | hypothetical protein (NCBI) | compare |
| b0781 | moaA | -0.9 | -4.8 | molybdenum cofactor biosynthesis protein A (NCBI) | compare |
| b0764 | modB | -0.9 | -2.7 | molybdate ABC transporter permease protein (NCBI) | compare |
| b0688 | pgm | -0.8 | -2.1 | phosphoglucomutase (NCBI) | compare |
| b4679 | yohP | -0.8 | -1.8 | expressed protein (RefSeq) | compare |
| b1785 | yeaI | -0.8 | -1.1 | predicted diguanylate cyclase (NCBI) | compare |
| b1286 | rnb | -0.8 | -1.6 | exoribonuclease II (NCBI) | compare |
| b2343 | b2343 | -0.8 | -1.3 | orf, hypothetical protein (VIMSS) | compare |
| b1236 | galU | -0.8 | -2.4 | glucose-1-phosphate uridylyltransferase (NCBI) | compare |
| b0729 | sucD | -0.8 | -1.7 | succinyl-CoA synthetase subunit alpha (NCBI) | compare |
| b1926 | fliT | -0.8 | -1.0 | predicted chaperone (NCBI) | compare |
| b0908 | aroA | -0.8 | -4.6 | 3-phosphoshikimate 1-carboxyvinyltransferase (NCBI) | compare |
| b2450 | yffS | -0.8 | -1.5 | CPZ-55 prophage; predicted protein (RefSeq) | compare |
| b1308 | pspE | -0.8 | -2.9 | thiosulfate:cyanide sulfurtransferase (rhodanese) (NCBI) | compare |
| b1160 | elbA | -0.8 | -0.5 | hypothetical protein (NCBI) | compare |
| b2271 | yfbL | -0.8 | -3.1 | putative aminopeptidase (VIMSS) | compare |
| b4702 | mgtL | -0.8 | -1.3 | regulatory leader peptide for mgtA (NCBI) | compare |
| b2083 | yegZ | -0.8 | -1.6 | orf, hypothetical protein (VIMSS) | compare |
| b2937 | speB | -0.8 | -3.6 | agmatinase (NCBI) | compare |
| b0761 | modE | -0.8 | -4.0 | DNA-binding transcriptional dual regulator (NCBI) | compare |
| b3404 | envZ | -0.8 | -4.7 | osmolarity sensor protein (NCBI) | compare |
| b0009 | mog | -0.8 | -4.1 | molybdenum cofactor biosynthesis protein (NCBI) | compare |
| b1824 | yobF | -0.8 | -1.5 | hypothetical protein (NCBI) | compare |
| b1357 | ydaS | -0.8 | -1.5 | Rac prophage; predicted DNA-binding transcriptional regulator (NCBI) | compare |
| b1063 | yceB | -0.8 | -1.9 | predicted lipoprotein (NCBI) | compare |
| b1040 | csgD | -0.8 | -0.5 | DNA-binding transcriptional activator in two-component regulatory system (NCBI) | compare |
| b3537 | yhjT | -0.8 | -2.8 | orf, hypothetical protein (VIMSS) | compare |
| b4202 | rpsR | -0.8 | -0.7 | 30S ribosomal protein S18 (NCBI) | compare |
| b2951 | yggS | -0.8 | -2.9 | predicted enzyme (NCBI) | compare |
| b1579 | intQ | -0.8 | -1.3 | Qin prophage; predicted defective integrase (RefSeq) | compare |
| b2259 | pmrD | -0.8 | -0.7 | polymyxin resistance protein B (VIMSS) | compare |
| b1961 | dcm | -0.8 | -1.4 | DNA cytosine methylase (NCBI) | compare |
| b1765 | ydjA | -0.8 | -0.8 | predicted oxidoreductase (NCBI) | compare |
| b1847 | yebF | -0.7 | -1.2 | predicted protein (RefSeq) | compare |
| b3933 | ftsN | -0.7 | -3.8 | essential cell division protein (NCBI) | compare |
| b4239 | treC | -0.7 | -1.2 | trehalose-6-P hydrolase (NCBI) | compare |
| b3631 | rfaG | -0.7 | -5.4 | glucosyltransferase I (NCBI) | compare |
| b0630 | lipB | -0.7 | -0.9 | protein of lipoate biosynthesis (VIMSS) | compare |
| b0763 | modA | -0.7 | -2.9 | molybdate transporter subunit (NCBI) | compare |
| b3999 | yjaG | -0.7 | -2.7 | hypothetical protein (NCBI) | compare |
| b4171 | miaA | -0.7 | -1.7 | tRNA delta(2)-isopentenylpyrophosphate transferase (NCBI) | compare |
| b0508 | hyi | -0.7 | -1.2 | hydroxypyruvate isomerase (NCBI) | compare |
| b3626 | rfaJ | -0.7 | -1.5 | UDP-D-glucose:(galactosyl)lipopolysaccharide glucosyltransferase (NCBI) | compare |
| b4579 | yaiX | -0.7 | -2.4 | no description | compare |
| b1278 | pgpB | -0.7 | -1.7 | phosphatidylglycerophosphatase B (NCBI) | compare |
| b1612 | fumA | -0.7 | -2.0 | fumarate hydratase (fumarase A), aerobic Class I (NCBI) | compare |
| b1121 | ycfZ | -0.7 | -0.5 | predicted inner membrane protein (NCBI) | compare |
| b3784 | rfe | -0.7 | -5.2 | UDP-GlcNAc:undecaprenylphosphate GlcNAc-1-phosphate transferase (NCBI) | compare |
| b2085 | b2085 | -0.7 | -1.7 | orf, hypothetical protein (VIMSS) | compare |
| b3469 | zntA | -0.7 | -3.4 | zinc, cobalt and lead efflux system (NCBI) | compare |
| b3162 | deaD | -0.7 | -2.0 | inducible ATP-independent RNA helicase (VIMSS) | compare |
| b1818 | manY | -0.7 | -1.4 | mannose-specific enzyme IIC component of PTS (NCBI) | compare |
| b1196 | ycgY | -0.7 | -1.4 | hypothetical protein (NCBI) | compare |
| b2237 | inaA | -0.7 | -1.9 | hypothetical protein (NCBI) | compare |
| b0436 | tig | -0.7 | -4.0 | trigger factor (NCBI) | compare |
| b2993 | hybD | -0.7 | -2.1 | predicted maturation element for hydrogenase 2 (NCBI) | compare |
| b1505 | ydeT | -0.7 | -0.5 | hypothetical protein (RefSeq) | compare |
| b1462 | b1462 | -0.7 | -1.7 | orf, hypothetical protein (VIMSS) | compare |
| b1875 | yecM | -0.7 | -2.5 | orf, hypothetical protein (VIMSS) | compare |
| b4505 | insX | -0.7 | -0.9 | predicted IS protein (RefSeq) | compare |
| b1773 | ydjI | -0.7 | -0.6 | predicted aldolase (NCBI) | compare |
| b3629 | rfaS | -0.7 | -1.3 | lipopolysaccharide core biosynthesis protein (NCBI) | compare |
| b0222 | lpcA | -0.7 | -1.3 | phosphoheptose isomerase (NCBI) | compare |
| b0499 | ylbH | -0.7 | -1.7 | conserved protein, rhs-like (RefSeq) | compare |
| b1542 | ydfI | -0.7 | -2.2 | predicted mannonate dehydrogenase (NCBI) | compare |