Experiment set10IT065 for Pseudomonas simiae WCS417
soil sample 8; outgrowth in LB
Group: soilMedia:
Culturing: fluoroDangl_ML3, potted plant
By: Dawn Chiniquy on 4-Apr-19
Specific Phenotypes
For 3 genes in this experiment
SEED Subsystems
| Subsystem | #Specific |
|---|---|
| Protein degradation | 1 |
| Terminal cytochrome C oxidases | 1 |
Metabolic Maps
Color code by fitness: see overview map or list of maps.
Maps containing gene(s) with specific phenotypes:
MetaCyc Pathways
Pathways that contain genes with specific phenotypes:
| Pathway | #Steps | #Present | #Specific |
|---|---|---|---|
| arsenite to oxygen electron transfer | 2 | 1 | 1 |
| arsenite to oxygen electron transfer (via azurin) | 3 | 1 | 1 |
| Arg/N-end rule pathway (eukaryotic) | 14 | 8 | 4 |
| aerobic respiration II (cytochrome c) (yeast) | 4 | 3 | 1 |
| aerobic respiration I (cytochrome c) | 4 | 3 | 1 |
| Fe(II) oxidation | 6 | 3 | 1 |