Experiment set10IT064 for Escherichia coli BW25113

Compare to:

LB Anaerobic with Vancomycin Hydrochloride from Streptomyces orientalis 0.00003125 mM

Genes with specific phenotypes:

  gene name fitness t score description  
b4472 yhdP -5.1 -15.7 conserved membrane protein, predicted transporter (NCBI) compare
b4221 ytfN -4.8 -18.5 hypothetical protein (NCBI) compare
b4220 ytfM -4.5 -14.0 predicted outer membrane protein and surface antigen (NCBI) compare
b3963 fabR -3.5 -9.7 DNA-binding transcriptional repressor (RefSeq) compare
b2435 amiA -3.2 -6.0 N-acetylmuramoyl-l-alanine amidase I (NCBI) compare
b3928 yiiU -3.0 -7.7 hypothetical protein (NCBI) compare
b3687 ibpA -2.7 -9.0 heat shock chaperone (NCBI) compare
b3740 gidB -2.6 -10.7 glucose-inhibited division protein B (NCBI) compare
b1249 cls -2.5 -6.7 cardiolipin synthetase (NCBI) compare
b3196 yrbG -2.4 -7.5 predicted calcium/sodium:proton antiporter (NCBI) compare
b3409 feoB -2.3 -16.3 ferrous iron transport protein B (NCBI) compare
b3554 yiaF -2.3 -10.5 orf, hypothetical protein (VIMSS) compare
b2242 glpB -2.1 -7.3 anaerobic glycerol-3-phosphate dehydrogenase subunit B (NCBI) compare
b2243 glpC -2.1 -7.0 sn-glycerol-3-phosphate dehydrogenase (anaerobic), small subunit (NCBI) compare
b2241 glpA -2.0 -10.8 sn-glycerol-3-phosphate dehydrogenase (anaerobic), large subunit, FAD/NAD(P)-binding (NCBI) compare
b3408 feoA -2.0 -10.0 ferrous iron transport protein A (NCBI) compare
b0868 b0868 -2.0 -9.4 putative nucleotide di-P-sugar epimerase or dehydratase (VIMSS) compare
b0434 yajG -2.0 -7.7 putative polymerase/proteinase (VIMSS) compare
b1878 flhE -1.8 -5.2 hypothetical protein (NCBI) compare
b0847 ybjL -1.8 -8.2 hypothetical protein (NCBI) compare
b3197 kdsD -1.6 -5.7 D-arabinose 5-phosphate isomerase (NCBI) compare
b3166 truB -1.5 -6.4 tRNA pseudouridine synthase B (NCBI) compare
b0939 ycbR -1.4 -6.1 predicted periplasmic pilin chaperone (NCBI) compare
b2513 yfgM -1.4 -5.2 hypothetical protein (NCBI) compare
b4049 dusA -1.4 -5.2 tRNA-dihydrouridine synthase A (RefSeq) compare
b3416 malQ -1.4 -8.0 4-alpha-glucanotransferase (amylomaltase) (NCBI) compare
b2517 yfgB -1.3 -5.5 predicted enzyme (NCBI) compare
b3529 yhjK -1.3 -8.9 predicted diguanylate cyclase (RefSeq) compare
b3391 hofQ -1.3 -6.0 predicted fimbrial transporter (NCBI) compare
b4022 yjbC -1.2 -6.7 23S rRNA pseudouridine synthase (NCBI) compare
b3570 bax -1.1 -5.6 hypothetical protein (NCBI) compare
b3825 pldB -1.0 -6.3 lysophospholipase L(2) (NCBI) compare
b2298 yfcC +1.0 6.5 putative S-transferase (VIMSS) compare
b4392 slt +1.1 8.7 soluble lytic murein transglycosylase (VIMSS) compare
b2132 bglX +1.1 7.7 beta-D-glucoside glucohydrolase, periplasmic (NCBI) compare
b2836 aas +1.1 7.6 2-acyl-glycerophospho-ethanolamine acyltransferase (NCBI) compare
b1047 mdoC +1.2 7.4 glucans biosynthesis protein (NCBI) compare
b2092 gatC +1.3 5.3 galactitol-specific enzyme IIC component of PTS (NCBI) compare
b1805 fadD +1.3 8.4 acyl-CoA synthase (NCBI) compare
b3207 yrbL +1.3 6.0 hypothetical protein (NCBI) compare
b0418 pgpA +1.5 6.8 phosphatidylglycerophosphatase A (NCBI) compare
b2134 pbpG +1.7 11.4 penicillin-binding protein 7 (VIMSS) compare
b3785 wzzE +1.9 8.8 putative transport protein (VIMSS) compare
b4359 mdoB +1.9 15.5 phosphoglycerol transferase I (VIMSS) compare
b3688 yidQ +2.1 11.8 orf, hypothetical protein (VIMSS) compare
b1220 ychO +2.1 10.8 predicted invasin (RefSeq) compare
b1097 yceG +2.9 16.5 predicted aminodeoxychorismate lyase (NCBI) compare


Specific phenotypes for stress Vancomycin Hydrochloride from Streptomyces orientalis across organisms