| | gene | name | fitness | t score | description | |
|---|
| b1105 | ycfM | -6.1 | -4.2 | predicted outer membrane lipoprotein (NCBI) | compare |
| b2313 | cvpA | -5.6 | -3.9 | membrane protein required for colicin V production (NCBI) | compare |
| b1111 | ycfQ | -5.6 | -3.8 | orf, hypothetical protein (VIMSS) | compare |
| b0436 | tig | -5.4 | -3.7 | trigger factor (NCBI) | compare |
| b2617 | smpA | -5.3 | -3.6 | small membrane protein A (VIMSS) | compare |
| b0178 | hlpA | -5.3 | -3.6 | periplasmic chaperone (NCBI) | compare |
| b2188 | yejM | -5.2 | -5.0 | predicted hydrolase, inner membrane (NCBI) | compare |
| b2571 | rseB | -5.1 | -6.1 | periplasmic negative regulator of sigmaE (NCBI) | compare |
| b4472 | yhdP | -5.1 | -15.7 | conserved membrane protein, predicted transporter (NCBI) | compare |
| b4221 | ytfN | -4.8 | -18.5 | hypothetical protein (NCBI) | compare |
| b4053 | alr | -4.6 | -8.2 | alanine racemase (NCBI) | compare |
| b0149 | mrcB | -4.5 | -6.9 | penicillin-binding protein 1b (NCBI) | compare |
| b4220 | ytfM | -4.5 | -14.0 | predicted outer membrane protein and surface antigen (NCBI) | compare |
| b3199 | yrbK | -4.4 | -3.0 | hypothetical protein (NCBI) | compare |
| b3636 | rpmG | -4.3 | -2.9 | 50S ribosomal protein L33 (NCBI) | compare |
| b4238 | nrdD | -4.3 | -17.7 | anaerobic ribonucleoside triphosphate reductase (NCBI) | compare |
| b3017 | sufI | -4.3 | -13.1 | repressor protein for FtsI (NCBI) | compare |
| b0949 | uup | -4.3 | -7.6 | fused predicted transporter subunits of ABC superfamily: ATP-binding components (NCBI) | compare |
| b2512 | yfgL | -4.3 | -4.1 | protein assembly complex, lipoprotein component (NCBI) | compare |
| b2215 | ompC | -4.2 | -5.7 | outer membrane porin protein C (NCBI) | compare |
| b1192 | ldcA | -4.1 | -5.6 | L,D-carboxypeptidase A (NCBI) | compare |
| b2937 | speB | -4.0 | -2.8 | agmatinase (NCBI) | compare |
| b4237 | nrdG | -3.9 | -10.7 | anaerobic ribonucleotide reductase activating protein (NCBI) | compare |
| b1855 | lpxM | -3.9 | -4.6 | lipid A biosynthesis (KDO)2-(lauroyl)-lipid IVA acyltransferase (NCBI) | compare |
| b2494 | yfgC | -3.8 | -8.0 | predicted peptidase (NCBI) | compare |
| b1175 | minD | -3.8 | -4.4 | membrane ATPase of the MinC-MinD-MinE system (NCBI) | compare |
| b2572 | rseA | -3.7 | -7.1 | anti-sigma factor (NCBI) | compare |
| b0677 | nagA | -3.6 | -3.5 | N-acetylglucosamine-6-phosphate deacetylase (NCBI) | compare |
| b2528 | iscA | -3.6 | -2.4 | iron-sulfur cluster assembly protein (NCBI) | compare |
| b4025 | pgi | -3.5 | -5.9 | glucose-6-phosphate isomerase (NCBI) | compare |
| b3963 | fabR | -3.5 | -9.7 | DNA-binding transcriptional repressor (RefSeq) | compare |
| b2175 | spr | -3.5 | -4.1 | predicted peptidase, outer membrane lipoprotein (NCBI) | compare |
| b0729 | sucD | -3.4 | -4.6 | succinyl-CoA synthetase subunit alpha (NCBI) | compare |
| b3838 | tatB | -3.3 | -8.0 | sec-independent translocase (NCBI) | compare |
| b3387 | dam | -3.3 | -9.2 | DNA adenine methylase (NCBI) | compare |
| b3405 | ompR | -3.3 | -2.3 | osmolarity response regulator (NCBI) | compare |
| b3404 | envZ | -3.3 | -9.9 | osmolarity sensor protein (NCBI) | compare |
| b3871 | bipA | -3.2 | -11.1 | GTP-binding protein (NCBI) | compare |
| b1842 | holE | -3.2 | -2.2 | DNA polymerase III, theta subunit (NCBI) | compare |
| b2435 | amiA | -3.2 | -6.0 | N-acetylmuramoyl-l-alanine amidase I (NCBI) | compare |
| b3150 | yraP | -3.2 | -7.8 | hypothetical protein (NCBI) | compare |
| b3792 | wzxE | -3.1 | -3.7 | O-antigen translocase (NCBI) | compare |
| b3443 | yrhA | -3.1 | -2.1 | orf, hypothetical protein (VIMSS) | compare |
| b3839 | tatC | -3.1 | -3.0 | TatABCE protein translocation system subunit (NCBI) | compare |
| b4000 | hupA | -3.0 | -5.1 | HU, DNA-binding transcriptional regulator, alpha subunit (NCBI) | compare |
| b3928 | yiiU | -3.0 | -7.7 | hypothetical protein (NCBI) | compare |
| b0386 | proC | -3.0 | -2.9 | pyrroline-5-carboxylate reductase (NCBI) | compare |
| b0239 | frsA | -3.0 | -8.4 | fermentation/respiration switch protein (NCBI) | compare |
| b0145 | dksA | -3.0 | -2.0 | DNA-binding transcriptional regulator of rRNA transcription, DnaK suppressor protein (NCBI) | compare |
| b1126 | potA | -3.0 | -6.5 | putrescine/spermidine ABC transporter ATPase protein (NCBI) | compare |
| b0740 | tolB | -2.9 | -2.0 | translocation protein TolB precursor (NCBI) | compare |
| b0226 | dinJ | -2.9 | -4.8 | predicted antitoxin of YafQ-DinJ toxin-antitoxin system (NCBI) | compare |
| b3778 | rep | -2.8 | -3.9 | DNA helicase and single-stranded DNA-dependent ATPase (NCBI) | compare |
| b4509 | ylcG | -2.8 | -2.3 | DLP12 prophage; predicted protein (NCBI) | compare |
| b0741 | pal | -2.8 | -1.9 | peptidoglycan-associated outer membrane lipoprotein (NCBI) | compare |
| b0990 | cspG | -2.8 | -1.9 | DNA-binding transcriptional regulator (NCBI) | compare |
| b1123 | potD | -2.8 | -5.2 | spermidine/putrescine ABC transporter periplasmic substrate-binding protein (NCBI) | compare |
| b0623 | cspE | -2.7 | -2.4 | cold shock protein E (NCBI) | compare |
| b0053 | surA | -2.7 | -1.9 | peptidyl-prolyl cis-trans isomerase (PPIase) (NCBI) | compare |
| b1493 | gadB | -2.7 | -1.2 | glutamate decarboxylase B, PLP-dependent (NCBI) | compare |
| b3687 | ibpA | -2.7 | -9.0 | heat shock chaperone (NCBI) | compare |
| b4201 | priB | -2.6 | -3.1 | primosomal replication protein N (NCBI) | compare |
| b3740 | gidB | -2.6 | -10.7 | glucose-inhibited division protein B (NCBI) | compare |
| b0014 | dnaK | -2.6 | -1.8 | molecular chaperone DnaK (NCBI) | compare |
| b1124 | potC | -2.6 | -5.4 | spermidine/putrescine ABC transporter membrane protein (NCBI) | compare |
| b2518 | ndk | -2.6 | -1.8 | nucleoside diphosphate kinase (NCBI) | compare |
| b2477 | nlpB | -2.6 | -4.9 | lipoprotein-34 (VIMSS) | compare |
| b1361 | ydaW | -2.6 | -1.2 | orf, hypothetical protein (VIMSS) | compare |
| b2939 | yqgB | -2.5 | -1.5 | predicted protein (RefSeq) | compare |
| b1249 | cls | -2.5 | -6.7 | cardiolipin synthetase (NCBI) | compare |
| b3341 | rpsG | -2.5 | -1.7 | 30S ribosomal protein S7 (NCBI) | compare |
| b0082 | mraW | -2.5 | -3.3 | S-adenosyl-methyltransferase (NCBI) | compare |
| b1850 | eda | -2.4 | -2.8 | keto-hydroxyglutarate-aldolase/keto-deoxy- phosphogluconate aldolase (NCBI) | compare |
| b3196 | yrbG | -2.4 | -7.5 | predicted calcium/sodium:proton antiporter (NCBI) | compare |
| b3933 | ftsN | -2.4 | -11.3 | essential cell division protein (NCBI) | compare |
| b1286 | rnb | -2.4 | -1.6 | exoribonuclease II (NCBI) | compare |
| b3237 | argR | -2.4 | -3.9 | arginine repressor (NCBI) | compare |
| b0957 | ompA | -2.4 | -2.6 | outer membrane protein A (3a;II*;G;d) (NCBI) | compare |
| b3409 | feoB | -2.3 | -16.3 | ferrous iron transport protein B (NCBI) | compare |
| b3649 | rpoZ | -2.3 | -3.5 | DNA-directed RNA polymerase subunit omega (NCBI) | compare |
| b3554 | yiaF | -2.3 | -10.5 | orf, hypothetical protein (VIMSS) | compare |
| b1847 | yebF | -2.3 | -2.2 | predicted protein (RefSeq) | compare |
| b3247 | cafA | -2.3 | -7.5 | bundles of cytoplasmic filaments (VIMSS) | compare |
| b0902 | pflA | -2.3 | -7.2 | pyruvate formate lyase activating enzyme 1 (NCBI) | compare |
| b2576 | srmB | -2.3 | -1.5 | ATP-dependent RNA helicase (NCBI) | compare |
| b3836 | b3836 | -2.2 | -4.6 | orf, hypothetical protein (VIMSS) | compare |
| b1334 | fnr | -2.2 | -2.6 | DNA-binding transcriptional dual regulator, global regulator of anaerobic growth (NCBI) | compare |
| b2620 | smpB | -2.2 | -1.5 | SsrA-binding protein (NCBI) | compare |
| b0737 | tolQ | -2.2 | -1.5 | membrane spanning protein in TolA-TolQ-TolR complex (NCBI) | compare |
| b4139 | aspA | -2.1 | -8.9 | aspartate ammonia-lyase (aspartase) (VIMSS) | compare |
| b0440 | hupB | -2.1 | -5.5 | HU, DNA-binding transcriptional regulator, beta subunit (NCBI) | compare |
| b1348 | lar | -2.1 | -1.4 | Rac prophage; restriction alleviation protein (NCBI) | compare |
| b1125 | potB | -2.1 | -4.6 | spermidine/putrescine ABC transporter membrane protein (NCBI) | compare |
| b2242 | glpB | -2.1 | -7.3 | anaerobic glycerol-3-phosphate dehydrogenase subunit B (NCBI) | compare |
| b2243 | glpC | -2.1 | -7.0 | sn-glycerol-3-phosphate dehydrogenase (anaerobic), small subunit (NCBI) | compare |
| b0814 | ompX | -2.1 | -4.1 | outer membrane protein X (NCBI) | compare |
| b3198 | kdsC | -2.1 | -2.3 | 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase (NCBI) | compare |
| b2241 | glpA | -2.0 | -10.8 | sn-glycerol-3-phosphate dehydrogenase (anaerobic), large subunit, FAD/NAD(P)-binding (NCBI) | compare |
| b2363 | yfdT | -2.0 | -2.4 | CPS-53 (KpLE1) prophage; predicted protein (NCBI) | compare |
| b4451 | ryhB | -2.0 | -1.9 | Regulatory sRNA mediating positive Fur regulon response; requires Hfq for function; global iron regulator; degraded by RNase E when bound to target (RefSeq) | compare |
| b3408 | feoA | -2.0 | -10.0 | ferrous iron transport protein A (NCBI) | compare |
| b0868 | b0868 | -2.0 | -9.4 | putative nucleotide di-P-sugar epimerase or dehydratase (VIMSS) | compare |
| b4701 | sokX | -2.0 | -1.2 | sok-related sRNA, function unknown (RefSeq) | compare |
| b0434 | yajG | -2.0 | -7.7 | putative polymerase/proteinase (VIMSS) | compare |
| b2784 | relA | -1.9 | -9.1 | (p)ppGpp synthetase I/GTP pyrophosphokinase (NCBI) | compare |
| b0903 | pflB | -1.9 | -10.3 | pyruvate formate lyase I (NCBI) | compare |
| b4535 | yniD | -1.9 | -1.3 | predicted protein (RefSeq) | compare |
| b0764 | modB | -1.9 | -3.9 | molybdate ABC transporter permease protein (NCBI) | compare |
| b1575 | dicB | -1.9 | -1.8 | Qin prophage; cell division inhibition protein (NCBI) | compare |
| b0739 | tolA | -1.9 | -1.8 | cell envelope integrity inner membrane protein TolA (NCBI) | compare |
| b2330 | yfcB | -1.9 | -1.2 | putative adenine-specific methylase (VIMSS) | compare |
| b1724 | ydiZ | -1.8 | -2.6 | hypothetical protein (NCBI) | compare |
| b2569 | lepA | -1.8 | -2.4 | GTP-binding protein LepA (NCBI) | compare |
| b2910 | zapA | -1.8 | -4.4 | protein that localizes to the cytokinetic ring (NCBI) | compare |
| b4529 | ydbJ | -1.8 | -1.2 | hypothetical protein (NCBI) | compare |
| b0142 | folK | -1.8 | -0.8 | 2-amino-4-hydroxy-6-hydroxymethyldihyropteridine pyrophosphokinase (NCBI) | compare |
| b1878 | flhE | -1.8 | -5.2 | hypothetical protein (NCBI) | compare |
| b0847 | ybjL | -1.8 | -8.2 | hypothetical protein (NCBI) | compare |
| b0018 | mokC | -1.8 | -1.4 | regulatory protein for HokC, overlaps CDS of hokC (NCBI) | compare |
| b2553 | glnB | -1.8 | -4.6 | regulatory protein P-II for glutamine synthetase (NCBI) | compare |
| b4655 | ythA | -1.8 | -1.7 | expressed protein (RefSeq) | compare |
| b2506 | yfgI | -1.8 | -2.6 | hypothetical protein (NCBI) | compare |
| b2689 | yqaA | -1.8 | -4.3 | conserved inner membrane protein (NCBI) | compare |
| b0728 | sucC | -1.7 | -4.7 | succinyl-CoA synthetase subunit beta (NCBI) | compare |
| b1176 | minC | -1.7 | -2.8 | septum formation inhibitor (NCBI) | compare |
| b4234 | yjgA | -1.7 | -4.6 | hypothetical protein (NCBI) | compare |
| b2646 | ypjF | -1.7 | -1.5 | CP4-57 prophage; toxin of the YpjF-YfjZ toxin-antitoxin system (NCBI) | compare |
| b1164 | ycgZ | -1.7 | -1.6 | hypothetical protein (NCBI) | compare |
| b2498 | upp | -1.7 | -2.2 | uracil phosphoribosyltransferase (VIMSS) | compare |
| b2064 | asmA | -1.6 | -2.4 | predicted assembly protein (NCBI) | compare |
| b1150 | ymfR | -1.6 | -1.1 | e14 prophage; predicted protein (NCBI) | compare |
| b4614 | sokA | -1.6 | -2.8 | no description | compare |
| b4402 | yjjY | -1.6 | -1.0 | hypothetical protein (NCBI) | compare |
| b2501 | ppk | -1.6 | -6.8 | polyphosphate kinase (NCBI) | compare |
| b3197 | kdsD | -1.6 | -5.7 | D-arabinose 5-phosphate isomerase (NCBI) | compare |
| b1530 | marR | -1.6 | -4.1 | multiple antibiotic resistance protein; repressor of mar operon (VIMSS) | compare |
| b0548 | ninE | -1.6 | -2.1 | DLP12 prophage; conserved protein (NCBI) | compare |
| b0785 | moaE | -1.6 | -4.9 | molybdopterin synthase, large subunit (NCBI) | compare |
| b0049 | apaH | -1.6 | -2.3 | diadenosinetetraphosphatase (NCBI) | compare |
| b2830 | nudH | -1.6 | -1.0 | dinucleoside polyphosphate hydrolase (NCBI) | compare |
| b2896 | ygfX | -1.6 | -3.1 | hypothetical protein (NCBI) | compare |
| b0929 | ompF | -1.6 | -3.5 | outer membrane porin 1a (Ia;b;F) (NCBI) | compare |
| b3166 | truB | -1.5 | -6.4 | tRNA pseudouridine synthase B (NCBI) | compare |
| b1503 | ydeR | -1.5 | -1.5 | predicted fimbrial-like adhesin protein (NCBI) | compare |
| b4191 | ulaR | -1.5 | -3.5 | DNA-binding transcriptional dual regulator (NCBI) | compare |
| b1108 | ycfP | -1.5 | -2.1 | orf, hypothetical protein (VIMSS) | compare |
| b3388 | damX | -1.5 | -9.7 | hypothetical protein (NCBI) | compare |
| b2808 | gcvA | -1.5 | -2.6 | DNA-binding transcriptional dual regulator (NCBI) | compare |
| b2433 | b2433 | -1.5 | -2.4 | orf, hypothetical protein (VIMSS) | compare |
| b3469 | zntA | -1.5 | -5.2 | zinc, cobalt and lead efflux system (NCBI) | compare |
| b0730 | mngR | -1.5 | -1.4 | DNA-binding transcriptional dual regulator, fatty-acyl-binding (NCBI) | compare |
| b1920 | fliY | -1.5 | -2.0 | cystine transporter subunit (NCBI) | compare |
| b1252 | tonB | -1.4 | -2.8 | membrane spanning protein in TonB-ExbB-ExbD complex (NCBI) | compare |
| b3183 | obgE | -1.4 | -0.9 | GTPase involved in cell partioning and DNA repair (NCBI) | compare |
| b0939 | ycbR | -1.4 | -6.1 | predicted periplasmic pilin chaperone (NCBI) | compare |
| b2168 | fruK | -1.4 | -1.2 | 1-phosphofructokinase (NCBI) | compare |
| b2513 | yfgM | -1.4 | -5.2 | hypothetical protein (NCBI) | compare |
| b3930 | menA | -1.4 | -9.5 | 1,4-dihydroxy-2-naphthoate octaprenyltransferase (NCBI) | compare |
| b2938 | speA | -1.4 | -6.7 | arginine decarboxylase (NCBI) | compare |
| b4702 | mgtL | -1.4 | -1.6 | regulatory leader peptide for mgtA (NCBI) | compare |
| b2141 | yohJ | -1.4 | -2.4 | hypothetical protein (NCBI) | compare |
| b1739 | osmE | -1.4 | -1.5 | DNA-binding transcriptional activator (NCBI) | compare |
| b3226 | yhcK | -1.4 | -4.0 | putative FADA-type transcriptional regulator (VIMSS) | compare |
| b3617 | kbl | -1.4 | -5.5 | 2-amino-3-ketobutyrate coenzyme A ligase (NCBI) | compare |
| b4049 | dusA | -1.4 | -5.2 | tRNA-dihydrouridine synthase A (RefSeq) | compare |
| b1823 | cspC | -1.4 | -1.8 | stress protein, member of the CspA-family (NCBI) | compare |
| b3416 | malQ | -1.4 | -8.0 | 4-alpha-glucanotransferase (amylomaltase) (NCBI) | compare |
| b2809 | b2809 | -1.4 | -1.4 | orf, hypothetical protein (VIMSS) | compare |
| b1278 | pgpB | -1.4 | -1.3 | phosphatidylglycerophosphatase B (NCBI) | compare |
| b3096 | yqjB | -1.4 | -3.4 | hypothetical protein (NCBI) | compare |
| b3238 | yhcN | -1.4 | -1.4 | orf, hypothetical protein (VIMSS) | compare |
| b3082 | ygjM | -1.4 | -1.3 | predicted DNA-binding transcriptional regulator (NCBI) | compare |
| b2517 | yfgB | -1.3 | -5.5 | predicted enzyme (NCBI) | compare |
| b0218 | yafU | -1.3 | -1.6 | predicted inner membrane protein (RefSeq) | compare |
| b1594 | dgsA | -1.3 | -2.8 | DNA-binding transcriptional repressor (NCBI) | compare |
| b1566 | flxA | -1.3 | -2.8 | Qin prophage; predicted protein (NCBI) | compare |
| b0441 | ppiD | -1.3 | -7.4 | peptidyl-prolyl cis-trans isomerase (rotamase D) (NCBI) | compare |
| b1567 | intK | -1.3 | -2.0 | Qin prophage; predicted protein (RefSeq) | compare |
| b3529 | yhjK | -1.3 | -8.9 | predicted diguanylate cyclase (RefSeq) | compare |
| b1370 | insH-5 | -1.3 | -2.1 | Rac prophage; IS5 transposase and trans-activator (NCBI) | compare |
| b2259 | pmrD | -1.3 | -0.8 | polymyxin resistance protein B (VIMSS) | compare |
| b3803 | hemX | -1.3 | -6.6 | predicted uroporphyrinogen III methylase (NCBI) | compare |
| b0438 | clpX | -1.3 | -4.7 | ATP-dependent protease ATP-binding subunit (NCBI) | compare |
| b0547 | ybcN | -1.3 | -2.0 | DLP12 prophage; predicted protein (NCBI) | compare |
| b0738 | tolR | -1.3 | -1.2 | membrane spanning protein in TolA-TolQ-TolR complex (NCBI) | compare |
| b3229 | sspA | -1.3 | -1.9 | stringent starvation protein A (NCBI) | compare |
| b0888 | trxB | -1.3 | -2.1 | thioredoxin reductase, FAD/NAD(P)-binding (NCBI) | compare |
| b3609 | secB | -1.3 | -2.1 | export protein SecB (NCBI) | compare |
| b2457 | cchA | -1.3 | -3.3 | detox protein (VIMSS) | compare |
| b3391 | hofQ | -1.3 | -6.0 | predicted fimbrial transporter (NCBI) | compare |
| b0826 | moeB | -1.3 | -4.5 | molybdopterin biosynthesis protein MoeB (NCBI) | compare |
| b1969 | yedW | -1.3 | -1.9 | putative 2-component transcriptional regulator (VIMSS) | compare |
| b4179 | vacB | -1.2 | -3.3 | putative enzyme (VIMSS) | compare |
| b3500 | gor | -1.2 | -1.2 | glutathione reductase (NCBI) | compare |
| b1607 | ydgC | -1.2 | -1.4 | conserved inner membrane protein associated with alginate biosynthesis (NCBI) | compare |
| b1831 | proQ | -1.2 | -2.1 | putative solute/DNA competence effector (NCBI) | compare |
| b1598 | ydgD | -1.2 | -3.2 | predicted peptidase (NCBI) | compare |
| b0763 | modA | -1.2 | -3.3 | molybdate transporter subunit (NCBI) | compare |
| b1804 | rnd | -1.2 | -3.1 | ribonuclease D (NCBI) | compare |
| b4699 | fnrS | -1.2 | -0.8 | FNR-activated anaerobic sRNA antisense regulator down regulates cydDC, metE, sodA, sodB, Hfq-dependent; mediates negative FNR regulation (RefSeq) | compare |