Experiment set10IT063 for Agrobacterium fabrum C58

Compare to:

D-(+)-melezitose monohydrate carbon source

200 most detrimental genes:

  gene name fitness t score description  
Atu3337 +10.9 80.1 LacI family transcriptional regulator compare
Atu0593 +4.0 17.5 ABC transporter, membrane spanning protein compare
Atu0592 +3.2 13.6 ABC transporter, membrane spanning protein compare
Atu0591 +2.4 7.5 ABC transporter, substrate binding protein (alpha-glucoside) compare
Atu0594 +1.9 13.2 alpha-glucosidase compare
Atu3613 +1.4 1.2 hypothetical protein compare
Atu0225 +1.1 1.7 hypothetical protein compare
Atu1387 +1.1 3.6 transcriptional regulator, GntR family compare
Atu3008 +1.0 1.0 hypothetical protein compare
Atu2193 +0.9 1.5 hypothetical protein compare
Atu1847 +0.9 2.0 hypothetical protein compare
Atu2729 +0.9 1.5 hypothetical protein compare
Atu2787 +0.9 1.1 hypothetical protein compare
Atu3031 +0.9 1.6 hypothetical protein compare
Atu2240 +0.8 1.6 hypothetical protein compare
Atu4677 +0.8 1.5 hypothetical protein compare
Atu1203 +0.8 3.4 hypothetical protein compare
Atu0280 +0.8 2.0 hypothetical protein compare
Atu1503 +0.8 1.2 hypothetical protein compare
Atu2657 +0.7 2.0 hypothetical protein compare
Atu8151 +0.7 1.9 hypothetical protein compare
Atu3011 +0.7 1.9 ArsR family transcriptional regulator compare
Atu0749 +0.7 1.6 biotin synthesis BioY protein compare
Atu1836 +0.7 1.3 hypothetical protein compare
Atu3001 +0.7 1.3 hypothetical protein compare
Atu3182 +0.7 2.5 hypothetical protein compare
Atu4496 +0.7 2.5 acetyltransferase compare
Atu5430 +0.7 0.8 hypothetical protein compare
Atu0471 +0.7 2.6 hypothetical protein compare
Atu4200 +0.6 2.5 hypothetical protein compare
Atu1052 +0.6 1.9 hypothetical protein compare
Atu4144 +0.6 0.8 hypothetical protein compare
Atu5045 +0.6 1.6 hypothetical protein compare
Atu1570 +0.6 0.8 hypothetical protein compare
Atu6137 +0.6 0.9 hypothetical protein compare
Atu1565 +0.6 1.7 serine acetyltransferase compare
Atu5451 +0.6 0.9 hypothetical protein compare
Atu8184 +0.6 1.9 hypothetical protein compare
Atu1302 +0.6 1.6 hypothetical protein compare
Atu8170 +0.6 1.9 hypothetical protein compare
Atu2484 +0.6 1.4 hypothetical protein compare
Atu0135 +0.6 1.0 uracil phosphoribosyltransferase compare
Atu8154 +0.6 1.8 Plasmid stabilization system protein compare
Atu2634 +0.6 1.7 hypothetical protein compare
Atu0836 +0.6 1.7 Glutathione-S-transferase compare
Atu4159 +0.6 1.6 AsnC family transcriptional regulator compare
Atu1865 +0.5 2.5 hypothetical protein compare
Atu2561 +0.5 2.9 ABC transporter, substrate binding protein (molybdate) compare
Atu0525 +0.5 2.0 transcriptional regulator, LuxR family compare
Atu3122 +0.5 1.5 cold shock protein compare
Atu8200 +0.5 1.4 hypothetical protein compare
Atu0181 +0.5 2.9 hypothetical protein compare
Atu1149 +0.5 0.8 adenylate cyclase compare
Atu3012 +0.5 0.8 hypothetical protein compare
Atu0645 +0.5 0.4 hypothetical protein compare
Atu1831 +0.5 2.9 hypothetical protein compare
Atu0953 +0.5 0.9 hypothetical protein compare
Atu1043 +0.5 1.3 hypothetical protein compare
Atu5485 +0.5 1.9 hypothetical protein compare
Atu3999 +0.5 1.4 dithiobiotin synthetase compare
Atu8162 +0.5 0.6 hypothetical protein compare
Atu1510 +0.5 2.3 hypothetical protein compare
Atu1323 +0.5 1.3 hypothetical protein compare
Atu0938 +0.5 1.7 transcriptional regulator, MerR family compare
Atu1701 +0.5 1.3 protein-L-isoaspartate O-methyltransferase compare
Atu4075 +0.5 2.9 glycogen synthase compare
Atu2084 +0.5 0.5 hypothetical protein compare
Atu0649 +0.5 0.8 cyclopropane-fatty-acyl-phospholipid synthase compare
Atu0941 +0.5 0.7 hypothetical protein compare
Atu4540 +0.5 1.1 protocatechuate 3,4-dioxygenase subunit beta compare
Atu0063 +0.5 1.9 ABC transporter, substrate binding protein (sugar) compare
Atu3478 +0.5 1.7 3-methylcrotonoyl-CoA carboxylase beta subunit compare
Atu8092 +0.5 2.9 hypothetical protein compare
Atu2163 +0.5 0.8 hypothetical protein compare
Atu2235 +0.5 1.4 hypothetical protein compare
Atu4840 +0.5 2.4 hypothetical protein compare
Atu1558 +0.5 1.4 permease compare
Atu1892 +0.4 1.8 hypothetical protein compare
Atu0572 +0.4 1.2 hypothetical protein compare
Atu0859 +0.4 1.5 hypothetical protein compare
Atu1606 +0.4 1.7 methionine aminopeptidase compare
Atu1398 +0.4 1.2 ABC transporter, membrane spanning protein (amino acid) compare
Atu0328 +0.4 2.6 heat-inducible transcription repressor compare
Atu0869 +0.4 2.3 hypothetical protein compare
Atu3152 +0.4 2.2 AraC family transcriptional regulator compare
Atu5517 +0.4 1.7 hypothetical protein compare
Atu0477 +0.4 1.1 hypothetical protein compare
Atu1354 +0.4 0.7 6-hydroxymethyl-7,8-dihydropterin pyrophosphokinase compare
Atu0699 +0.4 1.9 DNA mismatch repair protein MutL compare
Atu3647 +0.4 1.2 hypothetical protein compare
Atu0746 +0.4 1.3 hypothetical protein compare
Atu2432 +0.4 1.3 hypothetical protein compare
Atu1184 +0.4 1.4 hypothetical protein compare
Atu1423 +0.4 2.3 hypothetical protein compare
Atu0680 +0.4 1.9 hypothetical protein compare
Atu3712 +0.4 0.9 hypothetical protein compare
Atu1160 +0.4 1.1 hypothetical protein compare
Atu2536 +0.4 1.7 two component response regulator compare
Atu0427 +0.4 1.6 hypothetical protein compare
Atu0142 +0.4 0.9 cytochrome o ubiquinol oxidase subunit II compare
Atu8195 +0.4 0.9 hypothetical protein compare
Atu1624 +0.4 2.2 transcriptional regulator, TetR family compare
Atu2677 +0.4 1.3 protein tyrosine phosphatase compare
Atu0540 +0.4 0.9 hypothetical protein compare
Atu2605 +0.4 1.4 hypothetical protein compare
Atu8150 +0.4 1.9 hypothetical protein compare
Atu3809 +0.4 1.9 oxidoreductase compare
Atu3926 +0.4 1.6 translation initiation inhibitor compare
Atu0640 +0.4 1.5 hypothetical protein compare
Atu2056 +0.4 1.6 hypothetical protein compare
Atu3067 +0.4 2.1 hypothetical protein compare
Atu8176 +0.4 0.9 hypothetical protein compare
Atu1731 +0.4 1.7 xanthine-guanine phosphoribosyltransferase compare
Atu0430 +0.4 2.2 chaperonin (heat shock protein hsp33) compare
Atu3036 +0.4 1.5 dipeptide ABC transporter permease compare
Atu2399 +0.4 1.5 hypothetical protein compare
Atu3506 +0.4 1.3 hypothetical protein compare
Atu5157 +0.4 1.4 hypothetical protein compare
Atu5440 +0.4 1.9 hypothetical protein compare
Atu0485 +0.4 1.9 hypothetical protein compare
Atu2153 +0.4 2.2 ABC transporter, nucleotide binding/ATPase protein compare
Atu2378 +0.4 1.3 hypothetical protein compare
Atu0795 +0.4 0.8 hypothetical protein compare
Atu4574 +0.4 2.1 dehydrogenase compare
Atu0662 +0.4 1.5 transcriptional regulator, GntR family compare
Atu5455 +0.4 1.4 hypothetical protein compare
Atu2457 +0.4 1.9 hypothetical protein compare
Atu1631 +0.4 1.6 two component response regulator compare
Atu4193 +0.4 2.2 oligopeptide ABC transporter permease compare
Atu4803 +0.4 1.8 two component response regulator compare
Atu4598 +0.4 2.1 ABC transporter permease compare
Atu0555 +0.4 2.3 flagellar basal-body rod protein FlgB compare
Atu4527 +0.4 0.7 hypothetical protein compare
Atu4530 +0.4 1.8 TetR family transcriptional regulator compare
Atu3652 +0.4 2.1 hypothetical protein compare
Atu1887 +0.4 1.8 succinoglycan biosynthesis protein compare
Atu3287 +0.4 1.7 thiamine biosynthesis associated protein compare
Atu0116 +0.4 2.0 hypothetical protein compare
Atu5169 +0.4 1.6 type IV secretion protein AvhB8 compare
Atu2442 +0.4 1.2 hypothetical protein compare
Atu1293 +0.4 1.6 hypothetical protein compare
Atu6020 +0.4 2.1 conserved hypothetical protein compare
Atu3575 +0.4 2.2 xylose ABC transporter permease compare
Atu3009 +0.4 0.5 exopolysaccharide production protein compare
Atu0551 +0.4 1.0 flagellar protein FLGA precursor compare
Atu1619 +0.4 1.5 protein-export membrane protein SECG compare
Atu3286 +0.4 1.8 ABC transporter permease compare
Atu0558 +0.4 2.0 flagellar basal body rod protein compare
Atu4360 +0.4 1.3 sugar ABC transporter permease compare
Atu8035 +0.4 0.9 hypothetical protein compare
Atu4635 +0.4 1.4 hypothetical protein compare
Atu1848 +0.4 1.4 transcriptional regulator, GntR family compare
Atu2633 +0.3 1.2 RhtB family transporter compare
Atu0105 +0.3 1.7 hypothetical protein compare
Atu3327 +0.3 1.3 succinoglycan exopolysaccharide synthesis protein compare
Atu1952 +0.3 0.6 hypothetical protein compare
Atu2422 +0.3 2.3 ABC transporter, substrate binding protein (amino acid) compare
Atu0524 +0.3 1.7 transcriptional regulator, LuxR family compare
Atu1349 +0.3 1.5 hypothetical protein compare
Atu1682 +0.3 1.3 hypothetical protein compare
Atu8090 +0.3 2.1 hypothetical protein compare
Atu1351 +0.3 1.2 hypothetical protein compare
Atu3315 +0.3 1.0 UDP-glucose 4-epimerase compare
Atu4033 +0.3 2.3 sugar ABC transporter substrate-binding protein compare
Atu1658 +0.3 1.8 conserved protein involved in phosphoglycerol modification of cyclic glucan compare
Atu8144 +0.3 1.2 hypothetical protein compare
Atu2456 +0.3 1.1 lactoylglutathione lyase compare
Atu1608 +0.3 1.3 hypothetical protein compare
Atu8196 +0.3 1.7 hypothetical protein compare
Atu0546 +0.3 2.2 flagellar biosynthetic protein compare
Atu4187 +0.3 0.6 tRNA-Met compare
Atu0807 +0.3 1.6 metallo-beta-lactamase superfamily protein compare
Atu0857 +0.3 1.7 oxidoreductase compare
Atu3808 +0.3 1.7 LysR family transcriptional regulator compare
Atu4165 +0.3 1.4 hypothetical protein compare
Atu0152 +0.3 1.0 hypothetical protein compare
Atu2737 +0.3 1.7 oxidoredutase compare
Atu2234 +0.3 1.0 hypothetical protein compare
Atu2077 +0.3 0.7 DNA polymerase III, epsilon subunit compare
Atu2733 +0.3 1.6 hypothetical protein compare
Atu1245 +0.3 2.2 agmatinase compare
Atu4418 +0.3 1.6 glutaryl-CoA dehydrogenase compare
Atu4893 +0.3 1.4 hypothetical protein compare
Atu2671 +0.3 2.0 ABC transporter, membrane spanning protein compare
Atu1834 +0.3 2.1 mutT like protein compare
Atu0853 +0.3 2.1 hypothetical protein compare
Atu1676 +0.3 1.4 para-aminobenzoate synthase component I compare
Atu0979 +0.3 1.7 two component sensor kinase compare
Atu3522 +0.3 1.8 glucans biosynthesis protein compare
Atu1837 +0.3 2.2 transcriptional regulator compare
Atu3692 +0.3 1.6 sigma factor compare
Atu0971 +0.3 1.1 two component sensor kinase compare
Atu5463 +0.3 1.8 putative UDP-glucose 4-epimerase compare
Atu8020 +0.3 1.1 hypothetical protein compare
Atu1988 +0.3 1.9 two component sensor kinase compare
Atu1897 +0.3 1.6 short chain dehydrogenase compare
Atu0796 +0.3 1.8 putative peptidase compare
Atu8163 +0.3 1.1 hypothetical protein compare
Atu0827 +0.3 1.0 hypothetical protein compare
Atu0086 +0.3 0.3 ribosome-binding factor A compare


Specific Phenotypes

For 8 genes in this experiment

For carbon source D-(+)-melezitose monohydrate in Agrobacterium fabrum C58

For carbon source D-(+)-melezitose monohydrate across organisms