Experiment set10IT061 for Escherichia coli BW25113
LB Anaerobic with Sulfamonomethoxine 0.0000625 mM
Group: stressMedia: LB + Sulfamonomethoxine (6.25E-02 mM)
Culturing: Keio_ML9a, 96 deep-well microplate; Multitron, Anaerobic, at 37 (C), shaken=0 rpm
By: Hans_Hualan on 7/20/2015
Media components: 10 g/L Tryptone, 5 g/L Yeast Extract, 5 g/L Sodium Chloride
Specific Phenotypes
For 2 genes in this experiment
For stress Sulfamonomethoxine in Escherichia coli BW25113
For stress Sulfamonomethoxine across organisms
SEED Subsystems
| Subsystem | #Specific |
|---|---|
| Folate Biosynthesis | 2 |
Metabolic Maps
Color code by fitness: see overview map or list of maps.
Maps containing gene(s) with specific phenotypes:
- Pentose and glucuronate interconversions
- Biosynthesis of steroids
- Tryptophan metabolism
- Lipopolysaccharide biosynthesis
- One carbon pool by folate
- Methane metabolism
- Folate biosynthesis
- Carotenoid biosynthesis - General
- Biosynthesis of phenylpropanoids
- Biosynthesis of alkaloids derived from terpenoid and polyketide
MetaCyc Pathways
Pathways that contain genes with specific phenotypes:
| Pathway | #Steps | #Present | #Specific |
|---|---|---|---|
| tetrahydromonapterin biosynthesis | 4 | 3 | 2 |
| dTMP de novo biosynthesis (mitochondrial) | 3 | 3 | 1 |
| tetrahydrofolate biosynthesis I | 3 | 3 | 1 |
| folate transformations III (E. coli) | 9 | 9 | 1 |
| superpathway of tetrahydrofolate biosynthesis | 10 | 9 | 1 |
| folate transformations II (plants) | 11 | 10 | 1 |
| superpathway of tetrahydrofolate biosynthesis and salvage | 12 | 11 | 1 |
| superpathway of chorismate metabolism | 59 | 54 | 1 |