Experiment set10IT061 for Agrobacterium fabrum C58

Compare to:

Methyl-B-D-galactopyranoside carbon source

200 most important genes:

  gene name fitness t score description  
Atu1750 -7.2 -6.9 phosphoribosyl c-AMP cyclohydrolase compare
Atu1844 -6.5 -4.5 Phosphoribosylformylglycinamidine synthetase compare
Atu0038 -6.4 -6.3 phosphoribosyl-ATP pyrophosphohydrolase compare
Atu0099 -6.3 -11.3 prephenate dehydratase compare
Atu0432 -6.1 -9.3 O-succinylhomoserine sulfhydrylase compare
Atu2791 -6.0 -8.2 3-isopropylmalate dehydrogenase compare
Atu2709 -6.0 -17.6 3-isopropylmalate dehydratase, large subunit compare
Atu2036 -5.9 -13.7 acetolactate synthase III, large subunit compare
Atu0679 -5.9 -7.0 ATP phosphoribosyltransferase compare
Atu1687 -5.8 -11.2 anthranilate phosphoribosyltransferase compare
Atu2289 -5.8 -16.7 anthranilate synthase component I and II compare
Atu0678 -5.7 -5.6 histidyl-tRNA synthetase compare
Atu1688 -5.7 -5.5 indole-3-glycerol-phosphate synthase compare
Atu2264 -5.6 -14.4 2-isopropylmalate synthase compare
Atu1205 -5.6 -12.4 threonine dehydratase compare
Atu1307 -5.5 -7.9 dihydroorotase compare
Atu0486 -5.4 -8.2 dihydroorotate dehydrogenase compare
Atu1845 -5.3 -6.2 phosphoribosylformylglycinamidine synthase I compare
Atu1308 -5.3 -9.0 aspartate carbamoyl transferase catalytic subunit compare
Atu3755 -5.3 -5.1 phosphoribosylaminoimidazole carboxylase ATPase subunit compare
Atu3706 -5.2 -9.4 D-3-phosphoglycerate dehydrogenase compare
Atu2718 -5.2 -8.7 homoserine O-succinyltransferase compare
Atu2040 -5.1 -6.0 phosphoserine phosphatase compare
Atu1140 -5.0 -5.5 phosphoribosyalaminoimidazole-succinocarboxamide synthase compare
Atu1588 -5.0 -10.1 homoserine dehydrogenase compare
Atu0400 -4.9 -6.8 orotate phosphoribosyltransferase compare
Atu3754 -4.9 -6.5 phosphoribosylaminoimidazole carboxylase catalytic subunit compare
Atu0399 -4.9 -8.8 dihydroorotase compare
Atu0537 -4.9 -7.5 histidinol dehydrogenase compare
Atu1075 -4.9 -8.7 amidophosphoribosyltransferase compare
Atu0041 -4.8 -3.3 glutamine amidotransferase compare
Atu2790 -4.7 -2.7 3-isopropylmalate dehydratase, small subunit compare
Atu1850 -4.7 -4.5 phosphoribosylformylglycinamidine synthetase II compare
Atu3707 -4.6 -4.5 phosphoserine aminotransferase compare
Atu0043 -4.5 -3.1 imidazoleglycerol-phosphate dehydratase compare
Atu2650 -4.5 -11.7 glycerol-3-phosphate dehydrogenase compare
Atu0298 -4.5 -10.0 orotidine 5 compare
Atu0017 -4.4 -4.3 N-(5-phosphoribosyl) anthranilate isomerase compare
Atu1141 -4.4 -8.5 Phosphoribosylglycinamide synthetase compare
Atu2726 -4.4 -20.2 pyruvate carboxylase compare
Atu3885 -4.3 -9.9 inositol monophosphatase compare
Atu2747 -4.2 -13.0 hypothetical protein compare
Atu3482 -4.0 -8.4 pantoate--beta-alanine ligase compare
Atu0647 -4.0 -8.9 phosphoribosylamine--glycine ligase compare
Atu0047 -3.5 -17.8 malate synthase G compare
Atu4773 -3.4 -3.0 two component response regulator compare
Atu2015 -3.3 -13.9 aminotransferase compare
Atu0039 -3.2 -2.9 imidazoleglycerol-phosphate synthase cyclase compare
Atu3783 -3.2 -15.3 glutamate synthase subunit beta compare
Atu0040 -3.1 -1.9 phosphoribosylformino-5-aminoimidazole carboxamide ribotide isomerase compare
Atu0723 -3.1 -3.0 FAD dependent oxidoreductase compare
Atu3731 -3.1 -8.5 5-formyltetrahydrofolate cyclo-ligase compare
Atu1686 -3.0 -16.8 peptidyl-prolyl cis-trans isomerse D compare
Atu0536 -2.9 -7.0 hypothetical protein compare
Atu0030 -2.9 -2.5 phosphocarrier protein HPr compare
Atu0803 -2.9 -18.6 pyruvate,orthophosphate dikinase compare
Atu3219 -2.9 -12.6 dihydroxy-acid dehydratase compare
Atu2684 -2.8 -2.5 hypothetical protein compare
Atu4505 -2.8 -8.4 LacI family transcriptional regulator compare
Atu3784 -2.7 -19.7 glutamate synthase large subunit compare
Atu3483 -2.7 -5.6 3-methyl-2-oxobutanoate hydroxymethyltransferase compare
Atu1589 -2.6 -10.2 aminotransferase, class I compare
Atu0029 -2.6 -5.6 S-adenosylhomocysteine hydrolase compare
Atu1359 -2.4 -1.8 dnaK deletion suppressor protein compare
Atu3763 -2.3 -2.2 hypothetical protein compare
Atu0608 -2.3 -13.4 transcriptional regulator compare
Atu0035 -2.3 -11.1 phosphoenolpyruvate carboxykinase compare
Atu6098 -2.3 -1.7 transcriptional regulator, HTH family compare
Atu0607 -2.1 -14.2 isocitrate lyase compare
Atu4096 -2.1 -8.9 nicotinate-nucleotide pyrophosphorylase compare
Atu4098 -2.1 -10.2 quinolinate synthetase compare
Atu4711 -2.1 -9.0 two component sensor kinase compare
Atu0703 -2.0 -3.5 keto-hydroxyglutarate-aldolase/keto-deoxy- phosphogluconate aldolase compare
Atu3348 -2.0 -7.8 hypothetical protein compare
Atu1620 -2.0 -11.3 triosephosphate isomerase compare
Atu3469 -2.0 -3.6 phosphoglyceromutase compare
Atu1030 -1.9 -1.8 GTP pyrophosphohydrolase/synthetase, RelA/SpoT family compare
Atu3349 -1.9 -7.2 ABC transporter permease compare
Atu2548 -1.9 -12.0 phosphoribosylaminoimidazole-succinocarboxamide synthase compare
Atu6114 -1.9 -1.8 hypothetical protein compare
Atu4217 -1.9 -2.0 TetR family transcriptional regulator compare
Atu0434 -1.9 -3.7 2'-deoxycytidine 5'-triphosphate deaminase compare
Atu1464 -1.8 -5.6 glycine cleavage system T protein, aminomethyltransferase compare
Atu1463 -1.8 -7.5 glycine cleavage system component H compare
Atu2155 -1.8 -14.0 methionine synthase compare
Atu0184 -1.8 -2.8 glucokinase compare
Atu3740 -1.8 -6.7 fructose bisphosphate aldolase compare
Atu0876 -1.7 -3.2 superoxide dismutase compare
Atu1225 -1.7 -1.5 hypothetical protein compare
Atu1462 -1.7 -11.0 glycine cleavage system protein P2 compare
Atu3147 -1.7 -12.6 oxidoreductase compare
Atu1748 -1.7 -7.2 NIFU-like protein compare
Atu0641 -1.7 -4.7 hypothetical protein compare
Atu3352 -1.6 -8.8 sugar ABC transporter substrate-binding protein compare
Atu3739 -1.6 -3.2 phosphoglycerate kinase compare
Atu3351 -1.6 -6.0 sugar ABC transporter permease compare
Atu1446 -1.6 -1.9 two component response regulator compare
Atu4097 -1.6 -8.0 L-aspartate oxidase compare
Atu3150 -1.5 -6.2 sugar ABC transporter permease compare
Atu0769 -1.5 -1.8 protoheme IX farnesyltransferase compare
Atu0346 -1.4 -3.5 uridylyltransferase/uridylyl-removing enzyme UTase compare
Atu2745 -1.4 -10.3 acetyl-coenzyme A synthetase compare
Atu3347 -1.4 -7.0 hypothetical protein compare
Atu3486 -1.4 -2.3 DeoR family transcriptional regulator compare
Atu0062 -1.4 -5.7 transcriptional regulator, ROK family compare
Atu3151 -1.4 -6.2 sugar ABC transporter substrate-binding protein compare
Atu4317 -1.4 -3.0 TetR family transcriptional regulator compare
Atu0664 -1.4 -7.2 transcriptional regulator, LysR family compare
Atu1456 -1.4 -7.5 sulfite reductase (NADPH) hemoprotein beta-component compare
Atu3350 -1.4 -7.9 ABC transporter permease compare
Atu2205 -1.3 -5.1 transcriptional regulator, MarR family compare
Atu0361 -1.3 -2.7 transcriptional regulator compare
Atu0189 -1.3 -2.7 ABC transporter, membrane spanning protein (peptide) compare
Atu3152 -1.3 -6.6 AraC family transcriptional regulator compare
Atu1810 -1.3 -0.9 hypothetical protein compare
Atu4072 -1.3 -2.1 nodulation protein N compare
Atu3148 -1.2 -5.3 sugar ABC transporter ATPase compare
Atu5125 -1.2 -3.9 GntR family transcriptional regulator compare
Atu0086 -1.2 -0.9 ribosome-binding factor A compare
Atu8115 -1.2 -4.3 Hypothetical Protein compare
Atu2803 -1.1 -3.7 Cobalamin biosynthesis associated protein compare
Atu2207 -1.1 -2.8 two component sensor kinase compare
Atu0533 -1.1 -2.0 putative inhibitor of septum formation compare
Atu3149 -1.1 -5.3 sugar ABC transporter permease compare
Atu4373 -1.1 -4.6 LacI family transcriptional regulator compare
Atu8054 -1.1 -1.0 hypothetical protein compare
Atu2532 -1.0 -3.1 transcriptional regulator, MarR family compare
Atu0188 -1.0 -2.7 ABC transporter, membrane spanning protein (peptide) compare
Atu2115 -1.0 -5.5 pyrophosphate--fructose-6-phosphate 1-phosphotransferase compare
Atu1454 -1.0 -5.1 siroheme synthase compare
Atu1028 -1.0 -1.6 hypothetical protein compare
Atu2795 -1.0 -5.5 cobalamin biosynthetic protein compare
Atu0606 -1.0 -1.1 hypothetical protein compare
Atu1076 -1.0 -3.1 colicin V production protein compare
Atu2807 -1.0 -4.5 cob(I)alamin adenosyltransferase compare
Atu4615 -0.9 -5.8 glucose-1-phosphate thymidylyltransferase compare
Atu0894 -0.9 -1.8 ABC transporter, membrane spanning protein compare
Atu3264 -0.9 -4.4 IclR family transcriptional regulator compare
Atu3732 -0.9 -4.4 hemolysin compare
Atu4674 -0.9 -6.0 GntR family transcriptional regulator compare
Atu2809 -0.9 -5.0 cobalamin biosynthesis protein compare
Atu4481 -0.9 -3.3 LacI family transcriptional regulator compare
Atu3908 -0.9 -5.6 GntR family transcriptional regulator compare
Atu2793 -0.9 -3.9 cobyrinic acid a,c-diamide synthase compare
Atu2662 -0.9 -1.5 acetyltransferase compare
Atu2770 -0.9 -4.0 acetoacetyl CoA reductase; poly-beta-hydroxybutyrate biosynthesis compare
Atu5513 -0.9 -2.0 cold shock protein compare
Atu3423 -0.9 -1.6 hypothetical protein compare
Atu0777 -0.9 -0.9 hypothetical protein compare
Atu2237 -0.9 -2.8 cytochrome c1 compare
Atu2805 -0.9 -3.9 cobalamin synthesis protein compare
Atu4541 -0.8 -1.9 carboxymuconolactone decarboxylase compare
Atu2640 -0.8 -2.9 hypothetical protein compare
Atu1455 -0.8 -2.2 hypothetical protein compare
Atu0149 -0.8 -2.5 enoyl-(acyl-carrier-protein) reductase compare
Atu2821 -0.8 -3.3 transcriptional regulator, GntR family compare
Atu4614 -0.8 -4.4 glycosyltransferase compare
Atu1685 -0.8 -1.0 hypothetical protein compare
Atu3668 -0.8 -1.9 siderophore biosynthesis protein compare
Atu2472 -0.8 -1.3 hypothetical protein compare
Atu4677 -0.8 -0.9 hypothetical protein compare
Atu3468 -0.8 -0.7 hypothetical protein compare
Atu3353 -0.8 -5.6 mannose-1-phosphate guanylyltransferase compare
Atu0101 -0.8 -3.9 cytochrome c compare
Atu2692 -0.8 -2.1 intracellular septation protein compare
Atu2799 -0.8 -2.4 precorrin-6x reductase compare
Atu2225 -0.8 -4.0 transcriptional regulator compare
Atu0300 -0.8 -3.7 methyltransferase compare
Atu2804 -0.8 -5.1 cobaltochelatase subunit compare
Atu3579 -0.8 -3.2 lactoylglutathione lyase compare
Atu4618 -0.8 -5.1 dTDP-rhamnose-3,5-epimerase compare
Atu3997 -0.8 -5.5 biotin synthetase compare
Atu3311 -0.8 -6.0 phosphomannose isomerase compare
Atu0566 -0.8 -1.5 hypothetical protein compare
Atu0501 -0.8 -5.3 acyl-CoA dehydrogenase compare
Atu1581 -0.8 -1.7 hypothetical protein compare
Atu0663 -0.8 -4.6 hypothetical protein compare
Atu1904 -0.8 -3.6 transcriptional regulator compare
Atu3413 -0.8 -2.3 AsnC family transcriptional regulator compare
Atu2239 -0.7 -2.7 ubiquinol-cytochrome C reductase iron-sulfur subunit compare
Atu2606 -0.7 -3.5 transcriptional regulator, GntR family compare
Atu1219 -0.7 -1.0 hypothetical protein compare
Atu3443 -0.7 -2.5 hypothetical protein compare
Atu0331 -0.7 -1.7 sigma-54 modulation protein compare
Atu3663 -0.7 -1.2 hypothetical protein compare
Atu0538 -0.7 -1.7 hypothetical protein compare
Atu4133 -0.7 -2.3 hypothetical protein compare
Atu4514 -0.7 -2.4 RpiR family transcriptional regulator compare
Atu2802 -0.7 -4.2 precorrin-8X methylmutase compare
Atu4686 -0.7 -1.5 hypothetical protein compare
Atu4890 -0.7 -1.1 IS426 transposase compare
Atu2379 -0.7 -4.0 phosphomannomutase compare
Atu1286 -0.7 -3.6 hypothetical protein compare
Atu0049 -0.7 -2.6 hypothetical protein compare
Atu4743 -0.7 -3.9 LacI family transcriptional regulator compare
Atu5470 -0.7 -1.5 hypothetical protein compare
Atu0912 -0.7 -0.9 Na+/H+ antiporter compare
Atu2209 -0.7 -2.7 pyrroline-5-carboxylate reductase compare
Atu2798 -0.7 -2.8 precorrin-6y methyltransferase compare
Atu4446 -0.7 -4.2 hypothetical protein compare


Specific Phenotypes

For 14 genes in this experiment

For carbon source Methyl-B-D-galactopyranoside in Agrobacterium fabrum C58

For carbon source Methyl-B-D-galactopyranoside across organisms