Experiment set10IT061 for Agrobacterium fabrum C58

Compare to:

Methyl-B-D-galactopyranoside carbon source

200 most detrimental genes:

  gene name fitness t score description  
Atu1522 +1.4 9.6 transcriptional regulator, LacI family compare
Atu3012 +1.1 1.9 hypothetical protein compare
Atu0142 +0.9 2.2 cytochrome o ubiquinol oxidase subunit II compare
Atu8162 +0.9 1.5 hypothetical protein compare
Atu4144 +0.8 1.3 hypothetical protein compare
Atu3598 +0.8 2.2 thiol:disulfide interchange protein compare
Atu4897 +0.8 1.3 hypothetical protein compare
Atu0809 +0.8 1.4 hypothetical protein compare
Atu1573 +0.7 1.5 hypothetical protein compare
Atu5045 +0.7 2.3 hypothetical protein compare
Atu2204 +0.7 1.5 hypothetical protein compare
Atu1694 +0.7 2.4 hypothetical protein compare
Atu0107 +0.7 1.9 hypothetical protein compare
Atu0836 +0.7 1.8 Glutathione-S-transferase compare
Atu3603 +0.7 2.0 two component response regulator compare
Atu1241 +0.7 1.5 hypothetical protein compare
Atu0470 +0.6 1.8 hypothetical protein compare
Atu2787 +0.6 1.0 hypothetical protein compare
Atu3160 +0.6 1.9 hypothetical protein compare
Atu4540 +0.6 2.0 protocatechuate 3,4-dioxygenase subunit beta compare
Atu8087 +0.6 0.8 putative peptidoglycan binding protein compare
Atu0141 +0.6 0.8 cytochrome O ubiquinol oxidase subunit I compare
Atu3014 +0.6 1.4 hypothetical protein compare
Atu0386 +0.6 1.5 hypothetical protein compare
Atu2464 +0.5 1.4 formyltetrahydrofolate deformylase compare
Atu0540 +0.5 1.5 hypothetical protein compare
Atu4407 +0.5 1.2 periplasmic nitrate reductase, NapD protein compare
Atu1189 +0.5 1.1 hypothetical protein compare
Atu5517 +0.5 2.1 hypothetical protein compare
Atu5057 +0.5 1.7 hypothetical protein compare
Atu6189 +0.5 1.3 protein secretion chaperone compare
Atu2201 +0.5 1.3 hydrolase compare
Atu3006 +0.5 1.9 hypothetical protein compare
Atu8151 +0.5 1.4 hypothetical protein compare
Atu3105 +0.5 3.0 hypothetical protein compare
Atu0225 +0.5 0.7 hypothetical protein compare
Atu5145 +0.5 1.4 acetyltransferase compare
Atu3008 +0.5 0.5 hypothetical protein compare
Atu3466 +0.5 0.9 ArsR family transcriptional regulator compare
Atu2733 +0.5 1.8 hypothetical protein compare
Atu1847 +0.5 1.2 hypothetical protein compare
Atu5130 +0.5 2.8 attachment protein compare
Atu5121 +0.5 4.0 two component response regulator compare
Atu3509 +0.5 2.0 hypothetical protein compare
Atu8190 +0.5 2.0 hypothetical protein compare
Atu4159 +0.5 1.2 AsnC family transcriptional regulator compare
Atu6112 +0.5 2.7 conserved hypothetical protein compare
Atu1897 +0.5 2.5 short chain dehydrogenase compare
Atu2344 +0.5 1.6 lactoylglutathione lyase compare
Atu2200 +0.4 1.1 cold shock protein compare
Atu8041 +0.4 1.2 hypothetical protein compare
Atu3506 +0.4 1.5 hypothetical protein compare
Atu0795 +0.4 1.0 hypothetical protein compare
Atu1752 +0.4 2.1 hypothetical protein compare
Atu2657 +0.4 1.6 hypothetical protein compare
Atu2135 +0.4 2.0 transcriptional regulator, TetR family compare
Atu1737 +0.4 1.7 hypothetical protein compare
Atu8144 +0.4 1.3 hypothetical protein compare
Atu1026 +0.4 1.0 hypothetical protein compare
Atu5163 +0.4 1.5 type IV secretion protein AvhB2 compare
Atu0530 +0.4 2.3 UDP-galactose 4-epimerase compare
Atu0673 +0.4 2.2 hypothetical protein compare
Atu5034 +0.4 1.0 hypothetical protein compare
Atu1078 +0.4 2.1 hypothetical protein compare
Atu3911 +0.4 1.3 hypothetical protein compare
Atu2456 +0.4 1.6 lactoylglutathione lyase compare
Atu8120 +0.4 1.4 hypothetical protein compare
Atu2475 +0.4 1.8 ABC transporter, membrane spanning protein compare
Atu2136 +0.4 2.3 chromosome partitioning protein compare
Atu1608 +0.4 2.5 hypothetical protein compare
Atu0572 +0.4 1.3 hypothetical protein compare
Atu4237 +0.4 1.7 hypothetical protein compare
Atu0772 +0.4 2.1 hypothetical protein compare
Atu3036 +0.4 1.8 dipeptide ABC transporter permease compare
Atu0718 +0.4 1.3 hypothetical protein compare
Atu0812 +0.4 1.2 hypothetical protein compare
Atu8177 +0.4 1.6 hypothetical protein compare
Atu5061 +0.4 1.8 glycerophosphoryl diester phosphodiesterase compare
Atu4543 +0.4 1.1 LysR family transcriptional regulator compare
Atu0788 +0.4 1.8 hypothetical protein compare
Atu2719 +0.4 2.3 aldose epimerase compare
Atu2236 +0.4 1.2 adenine phosphoribosyltransferase compare
Atu1481 +0.4 1.9 hypothetical protein compare
Atu1503 +0.4 0.6 hypothetical protein compare
Atu5538 +0.4 2.0 hypothetical protein compare
Atu4200 +0.4 1.1 hypothetical protein compare
Atu5152 +0.4 1.8 hypothetical protein compare
Atu4124 +0.4 2.1 branched chain amino acid ABC transporter ATPase compare
Atu1001 +0.4 1.9 hypothetical protein compare
Atu3491 +0.4 1.1 hypothetical protein compare
Atu1442 +0.4 1.7 competence/damage-inducible protein CinA compare
Atu0785 +0.4 1.8 ribosomal-protein (S5)-alanine N-acetyltransferase compare
Atu0488 +0.4 1.1 hypothetical protein compare
Atu3317 +0.4 1.0 hypothetical protein compare
Atu0630 +0.4 1.2 hypothetical protein compare
Atu0763 +0.4 1.9 hydrolase compare
Atu4589 +0.3 2.1 transmembrane transport protein compare
Atu3973 +0.3 2.2 hypothetical protein compare
Atu0681 +0.3 1.4 hypothetical protein compare
Atu2216 +0.3 1.9 Xaa-Pro dipeptidase compare
Atu2630 +0.3 1.8 hypothetical protein compare
Atu2298 +0.3 1.7 hypothetical protein compare
Atu5481 +0.3 1.8 ABC transporter membrane spanning protein compare
Atu0781 +0.3 1.1 hypothetical protein compare
Atu1323 +0.3 1.2 hypothetical protein compare
Atu3507 +0.3 1.4 hypothetical protein compare
Atu4819 +0.3 1.7 hypothetical protein compare
Atu4213 +0.3 1.1 hypothetical protein compare
Atu0869 +0.3 1.9 hypothetical protein compare
Atu2235 +0.3 1.1 hypothetical protein compare
Atu2059 +0.3 1.9 transcriptional regulator, TetR family compare
Atu1492 +0.3 1.2 transcriptional regulator, ArsR family compare
Atu3510 +0.3 1.0 amidohydrolase compare
Atu5183 +0.3 1.9 hypothetical protein compare
Atu0253 +0.3 2.3 hypothetical protein compare
Atu1871 +0.3 1.6 glutathione S-transferase compare
Atu1971 +0.3 1.2 hypothetical protein compare
Atu1440 +0.3 1.5 hypothetical protein compare
Atu4145 +0.3 1.8 hypothetical protein compare
Atu2220 +0.3 1.7 hypothetical protein compare
Atu2812 +0.3 1.9 hypothetical protein compare
Atu8156 +0.3 1.3 hypothetical protein compare
Atu0577 +0.3 1.0 FLAF protein compare
Atu0551 +0.3 1.1 flagellar protein FLGA precursor compare
Atu0827 +0.3 1.4 hypothetical protein compare
Atu0791 +0.3 2.1 transcriptional regulator, GntR family compare
Atu0645 +0.3 0.5 hypothetical protein compare
Atu1727 +0.3 1.4 hypothetical protein compare
Atu1660 +0.3 1.4 hypothetical protein compare
Atu1887 +0.3 1.8 succinoglycan biosynthesis protein compare
Atu3583 +0.3 1.3 hypothetical protein compare
Atu4369 +0.3 1.7 sugar ABC transporter substrate-binding protein compare
Atu0966 +0.3 1.2 hypothetical protein compare
Atu3554 +0.3 1.2 hypothetical protein compare
Atu3609 +0.3 1.2 1-acyl-sn-glycerol-3-phosphate acyltransferase compare
Atu1980 +0.3 0.7 hypothetical protein compare
Atu4061 +0.3 1.1 exopolysaccharide production repressor protein compare
Atu1968 +0.3 0.7 hypothetical protein compare
Atu4466 +0.3 1.1 oxidoreductase compare
Atu0780 +0.3 2.0 hypothetical protein compare
Atu0117 +0.3 0.9 hypothetical protein compare
Atu3697 +0.3 1.0 ATP-dependent protease LA 2 compare
Atu4081 +0.3 1.8 aspartate racemase compare
Atu2441 +0.3 0.7 RNA methylase compare
Atu2567 +0.3 1.2 thiamin biosynthesis protein ThiG compare
Atu4171 +0.3 1.6 cold-shock dead-box protein A compare
Atu0730 +0.3 0.9 hypothetical protein compare
Atu1176 +0.3 1.1 hypothetical protein compare
Atu8116 +0.3 1.8 hypothetical protein compare
Atu0233 +0.3 1.9 lysozyme compare
Atu0863 +0.3 1.9 hypothetical protein compare
Atu1851 +0.3 0.9 BolA/YrbA family protein compare
Atu1760 +0.3 0.5 hypothetical protein compare
Atu0756 +0.3 1.3 phosphoglycerate mutase compare
Atu3759 +0.3 0.6 hypothetical protein compare
Atu6106 +0.3 1.1 conserved hypothetical protein compare
Atu1625 +0.3 1.3 methyltransferase compare
Atu2407 +0.3 0.9 urease gamma subunit compare
Atu0752 +0.3 2.1 hypothetical protein compare
Atu1557 +0.3 1.8 alcohol dehydrogenase compare
Atu2284 +0.3 1.9 hypothetical protein compare
Atu1591 +0.3 1.5 hypothetical protein compare
Atu8099 +0.3 1.3 hypothetical protein compare
Atu1293 +0.3 1.3 hypothetical protein compare
Atu1731 +0.3 1.2 xanthine-guanine phosphoribosyltransferase compare
Atu4684 +0.3 1.8 hypothetical protein compare
Atu1032 +0.3 1.5 hypothetical protein compare
Atu8134 +0.3 1.7 hypothetical protein compare
Atu3246 +0.3 1.5 amino acid ABC transporter substrate-binding protein compare
Atu3010 +0.3 1.6 hypothetical protein compare
Atu3568 +0.3 2.2 hypothetical protein compare
Atu3071 +0.3 1.4 hypothetical protein compare
Atu2188 +0.3 1.8 oxidoreductase compare
Atu2433 +0.3 0.5 hypothetical protein compare
Atu3318 +0.3 2.1 LuxR family transcriptional regulator compare
Atu5205 +0.3 1.6 hypothetical protein compare
Atu4574 +0.3 1.5 dehydrogenase compare
Atu1317 +0.3 1.6 metal dependent hydrolase compare
Atu2659 +0.3 1.7 MFS permease compare
Atu1461 +0.3 1.5 hypothetical protein compare
Atu3001 +0.3 0.5 hypothetical protein compare
Atu0751 +0.3 1.1 ABC transporter, nucleotide binding/ATPase protein (cobalt) compare
Atu2276 +0.3 1.6 ABC transporter, substrate binding protein (branched chain amino acid) compare
Atu0262 +0.3 1.4 acetyltransferase compare
Atu5159 +0.3 1.5 hypothetical protein compare
Atu3751 +0.3 1.8 hypothetical protein compare
Atu4034 +0.3 1.6 two component sensor kinase compare
Atu8184 +0.3 1.4 hypothetical protein compare
Atu1320 +0.3 1.5 acetyltransferase compare
Atu8019 +0.3 1.3 hypothetical protein compare
Atu2350 +0.3 1.8 transcriptional regulator, LysR family compare
Atu3610 +0.3 1.0 transporter compare
Atu0435 +0.3 0.6 tRNA-Gly compare
Atu1499 +0.3 1.8 penicillin binding protein compare
Atu5408 +0.3 1.9 ABC transporter membrane spanning protein (amino acid) compare
Atu0280 +0.3 0.6 hypothetical protein compare
Atu6100 +0.3 1.4 conserved hypothetical protein compare
Atu2626 +0.3 1.4 hypothetical protein compare
Atu2091 +0.3 1.3 GGDEF family protein compare
Atu4273 +0.3 1.2 acetyl-CoA carboxylase, biotin carboxylase compare


Specific Phenotypes

For 14 genes in this experiment

For carbon source Methyl-B-D-galactopyranoside in Agrobacterium fabrum C58

For carbon source Methyl-B-D-galactopyranoside across organisms