| | gene | name | fitness | t score | description | |
|---|
| b1613 | manA | +1.3 | 3.0 | mannose-6-phosphate isomerase (VIMSS) | compare |
| b2279 | nuoK | +1.3 | 2.5 | NADH dehydrogenase subunit K (NCBI) | compare |
| b3860 | dsbA | +1.2 | 8.2 | periplasmic protein disulfide isomerase I (NCBI) | compare |
| b3500 | gor | +1.1 | 2.0 | glutathione reductase (NCBI) | compare |
| b1185 | dsbB | +1.1 | 3.4 | reoxidizes DsbA protein following formation of disulfide bond in P-ring of flagella. (VIMSS) | compare |
| b2058 | wcaB | +1.1 | 1.6 | predicted acyl transferase (NCBI) | compare |
| b1111 | ycfQ | +1.1 | 3.9 | orf, hypothetical protein (VIMSS) | compare |
| b1556 | b1556 | +1.1 | 2.9 | orf, hypothetical protein (VIMSS) | compare |
| b2642 | yfjW | +1.0 | 1.4 | CP4-57 prophage; predicted inner membrane protein (NCBI) | compare |
| b0200 | gmhB | +1.0 | 1.4 | hypothetical protein (NCBI) | compare |
| b1231 | tyrT | +1.0 | 1.3 | tRNA-Tyr (NCBI) | compare |
| b4533 | ynfO | +0.9 | 1.5 | Qin prophage; predicted protein (NCBI) | compare |
| b3250 | mreC | +0.9 | 1.4 | cell wall structural complex MreBCD transmembrane component MreC (NCBI) | compare |
| b4451 | ryhB | +0.9 | 1.8 | Regulatory sRNA mediating positive Fur regulon response; requires Hfq for function; global iron regulator; degraded by RNase E when bound to target (RefSeq) | compare |
| b4538 | yoeF | +0.9 | 1.9 | hypothetical protein (RefSeq) | compare |
| b1293 | sapB | +0.9 | 1.2 | predicted antimicrobial peptide transporter subunit (NCBI) | compare |
| b1332 | ynaJ | +0.8 | 0.7 | predicted inner membrane protein (NCBI) | compare |
| b1279 | yciS | +0.8 | 1.2 | conserved inner membrane protein (NCBI) | compare |
| b2951 | yggS | +0.8 | 3.7 | predicted enzyme (NCBI) | compare |
| b2912 | ygfA | +0.8 | 2.7 | putative ligase (VIMSS) | compare |
| b0247 | ykfG | +0.8 | 1.4 | CP4-6 prophage; predicted DNA repair protein (NCBI) | compare |
| b1751 | ydjY | +0.7 | 3.3 | orf, hypothetical protein (VIMSS) | compare |
| b4647 | mokA | +0.7 | 0.4 | no description | compare |
| b1143 | ymfI | +0.7 | 1.3 | orf, hypothetical protein (VIMSS) | compare |
| b2743 | pcm | +0.7 | 2.8 | protein-L-isoaspartate O-methyltransferase (NCBI) | compare |
| b4596 | yciZ | +0.7 | 1.6 | hypothetical protein (RefSeq) | compare |
| b1553 | ydfP | +0.7 | 2.1 | Qin prophage; conserved protein (NCBI) | compare |
| b4041 | plsB | +0.7 | 1.8 | glycerol-3-phosphate acyltransferase (VIMSS) | compare |
| b1842 | holE | +0.7 | 0.9 | DNA polymerase III, theta subunit (NCBI) | compare |
| b1090 | plsX | +0.7 | 2.9 | glycerolphosphate auxotrophy in plsB background (VIMSS) | compare |
| b2424 | cysU | +0.6 | 1.4 | sulfate/thiosulfate transporter subunit (NCBI) | compare |
| b0641 | rlpB | +0.6 | 1.3 | minor lipoprotein (NCBI) | compare |
| b1362 | rzpR | +0.6 | 1.5 | putative Rac prophage endopeptidase (VIMSS) | compare |
| b0926 | ycbK | +0.6 | 2.7 | hypothetical protein (NCBI) | compare |
| b1992 | cobS | +0.6 | 1.5 | cobalamin synthase (NCBI) | compare |
| b4241 | treR | +0.6 | 4.8 | trehalose repressor (NCBI) | compare |
| b3169 | nusA | +0.6 | 1.9 | transcription elongation factor NusA (NCBI) | compare |
| b1647 | ydhF | +0.6 | 2.3 | predicted oxidoreductase (NCBI) | compare |
| b2093 | gatB | +0.6 | 1.5 | galactitol-specific enzyme IIB component of PTS (NCBI) | compare |
| b0987 | ymcD | +0.6 | 2.9 | orf, hypothetical protein (VIMSS) | compare |
| b3863 | polA | +0.6 | 0.6 | DNA polymerase I (NCBI) | compare |
| b1593 | b1593 | +0.6 | 1.7 | orf, hypothetical protein (VIMSS) | compare |
| b2061 | wzb | +0.6 | 1.4 | protein-tyrosine phosphatase (NCBI) | compare |
| b4481 | rffT | +0.6 | 3.4 | 4-alpha-L-fucosyltransferase (NCBI) | compare |
| b1656 | sodB | +0.6 | 1.9 | superoxide dismutase, Fe (NCBI) | compare |
| b4158 | yjeO | +0.5 | 2.3 | conserved inner membrane protein (NCBI) | compare |
| b2050 | wcaI | +0.5 | 1.8 | predicted glycosyl transferase (NCBI) | compare |
| b1942 | fliJ | +0.5 | 1.1 | flagellar biosynthesis chaperone (NCBI) | compare |
| b0418 | pgpA | +0.5 | 2.8 | phosphatidylglycerophosphatase A (NCBI) | compare |
| b1008 | ycdI | +0.5 | 2.4 | hypothetical protein (NCBI) | compare |
| b1582 | ynfA | +0.5 | 1.5 | hypothetical protein (NCBI) | compare |
| b1630 | rsxD | +0.5 | 2.7 | electron transport complex protein RnfD (NCBI) | compare |
| b1581 | rspA | +0.5 | 1.9 | predicted dehydratase (NCBI) | compare |
| b4578 | insP | +0.5 | 1.6 | no description | compare |
| b0219 | yafV | +0.5 | 1.9 | predicted C-N hydrolase family amidase, NAD(P)-binding (NCBI) | compare |
| b2096 | gatY | +0.5 | 1.9 | tagatose-bisphosphate aldolase 1 (VIMSS) | compare |
| b4523 | yciX | +0.5 | 1.7 | hypothetical protein (RefSeq) | compare |
| b2134 | pbpG | +0.5 | 2.7 | penicillin-binding protein 7 (VIMSS) | compare |
| b0346 | mhpR | +0.5 | 2.4 | DNA-binding transcriptional activator, 3HPP-binding (RefSeq) | compare |
| b1804 | rnd | +0.5 | 1.8 | ribonuclease D (NCBI) | compare |
| b0685 | ybfE | +0.5 | 1.3 | orf, hypothetical protein (VIMSS) | compare |
| b1563 | relE | +0.5 | 1.0 | Qin prophage; toxin of the RelE-RelB toxin-antitoxin system (NCBI) | compare |
| b3791 | rffA | +0.5 | 3.2 | TDP-4-oxo-6-deoxy-D-glucose transaminase (NCBI) | compare |
| b0065 | yabI | +0.5 | 2.3 | conserved inner membrane protein (NCBI) | compare |
| b1963 | b1963 | +0.5 | 2.1 | orf, hypothetical protein (VIMSS) | compare |
| b3977 | tyrU | +0.5 | 0.5 | tRNA-Tyr (NCBI) | compare |
| b4403 | yjtD | +0.5 | 2.7 | predicted rRNA methyltransferase (NCBI) | compare |
| b1524 | yneH | +0.5 | 0.5 | predicted glutaminase (NCBI) | compare |
| b1632 | rsxE | +0.5 | 2.9 | NADH-ubiquinone oxidoreductase (NCBI) | compare |
| b1565 | ydfV | +0.5 | 1.8 | Qin prophage; predicted protein (NCBI) | compare |
| b2910 | zapA | +0.5 | 1.8 | protein that localizes to the cytokinetic ring (NCBI) | compare |
| b1266 | yciV | +0.5 | 1.4 | hypothetical protein (NCBI) | compare |
| b3658 | selC | +0.5 | 0.7 | tRNA-Sec (NCBI) | compare |
| b2285 | nuoE | +0.5 | 0.8 | NADH dehydrogenase subunit E (NCBI) | compare |
| b3181 | greA | +0.5 | 1.7 | transcription elongation factor: cleaves 3' nucleotide of paused mRNA (VIMSS) | compare |
| b0550 | rusA | +0.5 | 1.4 | DLP12 prophage; endonuclease RUS (NCBI) | compare |
| b1151 | ymfO | +0.4 | 1.7 | e14 prophage; conserved protein (RefSeq) | compare |
| b1757 | b1757 | +0.4 | 1.7 | putative thiosulfate sulfur transferase (VIMSS) | compare |
| b2617 | smpA | +0.4 | 1.1 | small membrane protein A (VIMSS) | compare |
| b0542 | renD | +0.4 | 1.1 | orf, hypothetical protein (VIMSS) | compare |
| b4589 | ylcI | +0.4 | 1.2 | hypothetical protein (RefSeq) | compare |
| b1312 | ycjP | +0.4 | 2.5 | predicted sugar transporter subunit: membrane component of ABC superfamily (NCBI) | compare |
| b2298 | yfcC | +0.4 | 2.6 | putative S-transferase (VIMSS) | compare |
| b4410 | ecnA | +0.4 | 0.9 | entericidin A membrane lipoprotein, antidote entericidin B (NCBI) | compare |
| b1743 | spy | +0.4 | 2.1 | envelope stress induced periplasmic protein (NCBI) | compare |
| b1394 | paaG | +0.4 | 1.3 | enoyl-CoA hydratase (NCBI) | compare |
| b0464 | acrR | +0.4 | 3.2 | DNA-binding transcriptional repressor (NCBI) | compare |
| b3027 | ygiZ | +0.4 | 0.2 | conserved inner membrane protein (NCBI) | compare |
| b1262 | trpC | +0.4 | 2.4 | N-(5-phosphoribosyl)anthranilate isomerase and indole-3-glycerolphosphate synthetase (VIMSS) | compare |
| b0798 | ybiA | +0.4 | 1.2 | hypothetical protein (NCBI) | compare |
| b0496 | ybbP | +0.4 | 3.1 | predicted inner membrane protein (NCBI) | compare |
| b0249 | ykfF | +0.4 | 0.9 | CP4-6 prophage; predicted protein (NCBI) | compare |
| b2258 | b2258 | +0.4 | 0.8 | putative transport/receptor protein (VIMSS) | compare |
| b1548 | nohA | +0.4 | 0.9 | Qin prophage; predicted packaging protein (RefSeq) | compare |
| b0632 | dacA | +0.4 | 2.7 | D-alanyl-D-alanine carboxypeptidase (penicillin-binding protein 5) (NCBI) | compare |
| b2783 | chpR | +0.4 | 0.8 | antitoxin of the ChpA-ChpR toxin-antitoxin system (NCBI) | compare |
| b0964 | yccT | +0.4 | 2.0 | hypothetical protein (NCBI) | compare |
| b2187 | yejL | +0.4 | 1.3 | hypothetical protein (NCBI) | compare |
| b1603 | pntA | +0.4 | 1.2 | NAD(P) transhydrogenase subunit alpha (NCBI) | compare |
| b2704 | srlB | +0.4 | 1.4 | glucitol/sorbitol-specific enzyme IIA component of PTS (NCBI) | compare |
| b0520 | ylbF | +0.4 | 1.8 | hypothetical protein (NCBI) | compare |
| b2266 | elaB | +0.4 | 1.6 | hypothetical protein (NCBI) | compare |
| b1806 | yeaY | +0.4 | 1.6 | predicted lipoprotein (NCBI) | compare |
| b3068 | ygjF | +0.4 | 1.5 | G/U mismatch-specific DNA glycosylase (NCBI) | compare |
| b3057 | bacA | +0.4 | 2.2 | undecaprenyl pyrophosphate phosphatase (NCBI) | compare |
| b3790 | rffC | +0.4 | 2.0 | TDP-fucosamine acetyltransferase (RefSeq) | compare |
| b1763 | topB | +0.4 | 1.5 | DNA topoisomerase III (NCBI) | compare |
| b1803 | yeaX | +0.4 | 1.3 | predicted oxidoreductase (NCBI) | compare |
| b0018 | mokC | +0.4 | 0.7 | regulatory protein for HokC, overlaps CDS of hokC (NCBI) | compare |
| b1620 | malI | +0.4 | 0.8 | DNA-binding transcriptional repressor (NCBI) | compare |
| b2236 | yfaE | +0.4 | 1.0 | predicted 2Fe-2S cluster-containing protein (NCBI) | compare |
| b2899 | yqfA | +0.4 | 2.2 | predicted oxidoreductase, inner membrane subunit (NCBI) | compare |
| b2095 | gatZ | +0.4 | 1.9 | D-tagatose 1,6-bisphosphate aldolase 2, subunit (NCBI) | compare |
| b0843 | ybjH | +0.4 | 1.1 | hypothetical protein (NCBI) | compare |
| b3101 | yqjF | +0.4 | 0.8 | orf, hypothetical protein (VIMSS) | compare |
| b4585 | sroB | +0.4 | 0.6 | Novel sRNA, function unknown (RefSeq) | compare |
| b2749 | ygbE | +0.4 | 2.1 | conserved inner membrane protein (NCBI) | compare |
| b3471 | yhhQ | +0.4 | 2.6 | conserved inner membrane protein (NCBI) | compare |
| b1292 | sapC | +0.4 | 0.7 | predicted antimicrobial peptide transporter subunit (NCBI) | compare |
| b1959 | yedA | +0.4 | 1.4 | predicted inner membrane protein (NCBI) | compare |
| b3242 | yhcR | +0.4 | 2.2 | orf, hypothetical protein (VIMSS) | compare |
| b1289 | ycjD | +0.4 | 1.4 | hypothetical protein (NCBI) | compare |
| b1682 | sufC | +0.4 | 1.8 | cysteine desulfurase ATPase component (NCBI) | compare |
| b1219 | ychN | +0.4 | 1.1 | hypothetical protein (NCBI) | compare |
| b0015 | dnaJ | +0.4 | 2.5 | chaperone Hsp40, co-chaperone with DnaK (NCBI) | compare |
| b1907 | tyrP | +0.4 | 1.3 | tyrosine transporter (NCBI) | compare |
| b0191 | yaeJ | +0.4 | 1.6 | hypothetical protein (NCBI) | compare |
| b3033 | yqiB | +0.4 | 1.8 | predicted dehydrogenase (NCBI) | compare |
| b1278 | pgpB | +0.4 | 0.7 | phosphatidylglycerophosphatase B (NCBI) | compare |
| b3190 | yrbA | +0.4 | 1.8 | orf, hypothetical protein (VIMSS) | compare |
| b1350 | recE | +0.4 | 2.0 | Rac prophage; exonuclease VIII, 5' -> 3' specific dsDNA exonuclease (NCBI) | compare |
| b1462 | b1462 | +0.4 | 1.2 | orf, hypothetical protein (VIMSS) | compare |
| b2080 | b2080 | +0.4 | 0.9 | orf, hypothetical protein (VIMSS) | compare |
| b4655 | ythA | +0.4 | 0.6 | expressed protein (RefSeq) | compare |
| b1993 | cobU | +0.4 | 1.7 | adenosylcobinamide kinase/adenosylcobinamide-phosphate guanylyltransferase (NCBI) | compare |
| b0767 | ybhE | +0.4 | 1.4 | 6-phosphogluconolactonase (NCBI) | compare |
| b0720 | gltA | +0.4 | 2.1 | citrate synthase (NCBI) | compare |
| b2690 | yqaB | +0.4 | 2.2 | predicted hydrolase (NCBI) | compare |
| b0875 | aqpZ | +0.4 | 2.0 | aquaporin Z (NCBI) | compare |
| b1625 | ydgT | +0.4 | 2.0 | predicted regulator (NCBI) | compare |
| b2708 | gutQ | +0.4 | 1.6 | orf, hypothetical protein (VIMSS) | compare |
| b2906 | visC | +0.4 | 1.9 | hypothetical protein (NCBI) | compare |
| b1336 | ydaH | +0.4 | 1.2 | putative pump protein (transport) (VIMSS) | compare |
| b4650 | yibS | +0.4 | 0.7 | no description | compare |
| b2195 | ccmG | +0.4 | 0.9 | periplasmic thioredoxin of cytochrome c-type biogenesis (NCBI) | compare |
| b3290 | trkA | +0.4 | 0.7 | potassium transporter peripheral membrane component (NCBI) | compare |
| b2597 | yfiA | +0.4 | 0.8 | cold shock protein associated with 30S ribosomal subunit (NCBI) | compare |
| b1217 | chaB | +0.4 | 0.4 | cation transport regulator (NCBI) | compare |
| b2044 | wcaL | +0.4 | 1.3 | predicted glycosyl transferase (NCBI) | compare |
| b2765 | ygcM | +0.3 | 1.5 | 6-pyruvoyl tetrahydrobiopterin synthase (PTPS) (NCBI) | compare |
| b1349 | recT | +0.3 | 1.8 | Rac prophage; recombination and repair protein (NCBI) | compare |
| b0721 | sdhC | +0.3 | 1.2 | succinate dehydrogenase cytochrome b556 large membrane subunit (NCBI) | compare |
| b2634 | yfjR | +0.3 | 1.3 | CP4-57 prophage; predicted DNA-binding transcriptional regulator (NCBI) | compare |
| b2741 | rpoS | +0.3 | 1.8 | RNA polymerase sigma factor (NCBI) | compare |
| b1424 | mdoD | +0.3 | 1.6 | glucan biosynthesis protein, periplasmic (RefSeq) | compare |
| b1602 | pntB | +0.3 | 1.4 | pyridine nucleotide transhydrogenase (NCBI) | compare |
| b3794 | rffM | +0.3 | 2.1 | putative UDP-N-acetyl-D-mannosaminuronic acid transferase (NCBI) | compare |
| b2288 | nuoA | +0.3 | 1.0 | NADH dehydrogenase I chain A (VIMSS) | compare |
| b3024 | ygiW | +0.3 | 1.3 | hypothetical protein (NCBI) | compare |
| b0920 | ycbC | +0.3 | 1.6 | conserved inner membrane protein (NCBI) | compare |
| b1855 | lpxM | +0.3 | 1.3 | lipid A biosynthesis (KDO)2-(lauroyl)-lipid IVA acyltransferase (NCBI) | compare |
| b0713 | ybgL | +0.3 | 1.2 | hypothetical protein (NCBI) | compare |
| b0578 | nfnB | +0.3 | 1.8 | dihydropteridine reductase, NAD(P)H-dependent, oxygen-insensitive (NCBI) | compare |
| b0097 | yacA | +0.3 | 1.1 | orf, hypothetical protein (VIMSS) | compare |
| b1431 | ydcL | +0.3 | 1.3 | predicted lipoprotein (NCBI) | compare |
| b0127 | yadG | +0.3 | 1.8 | predicted transporter subunit: ATP-binding component of ABC superfamily (NCBI) | compare |
| b1892 | flhD | +0.3 | 1.4 | DNA-binding transcriptional dual regulator with FlhC (RefSeq) | compare |
| b0407 | yajC | +0.3 | 0.9 | preprotein translocase subunit YajC (NCBI) | compare |
| b0982 | yccY | +0.3 | 1.7 | putative phosphatase (VIMSS) | compare |
| b3127 | garP | +0.3 | 1.9 | predicted (D)-galactarate transporter (NCBI) | compare |
| b1728 | ydjM | +0.3 | 1.0 | predicted inner membrane protein regulated by LexA (RefSeq) | compare |
| b0796 | ybiH | +0.3 | 1.2 | putative transcriptional regulator (VIMSS) | compare |
| b2947 | gshB | +0.3 | 1.2 | glutathione synthetase (NCBI) | compare |
| b2666 | yqaE | +0.3 | 1.5 | predicted membrane protein (NCBI) | compare |
| b3632 | rfaQ | +0.3 | 2.9 | lipopolysaccharide core biosynthesis protein (NCBI) | compare |
| b4577 | sgrS | +0.3 | 0.8 | small antisense RNA (NCBI) | compare |
| b1355 | b1355 | +0.3 | 0.7 | orf, hypothetical protein (VIMSS) | compare |
| b0807 | ybiN | +0.3 | 2.0 | orf, hypothetical protein (VIMSS) | compare |
| b1135 | ymfC | +0.3 | 1.7 | orf, hypothetical protein (VIMSS) | compare |
| b1271 | yciK | +0.3 | 1.1 | short chain dehydrogenase (NCBI) | compare |
| b0368 | tauD | +0.3 | 1.2 | taurine dioxygenase (NCBI) | compare |
| b2916 | argP | +0.3 | 1.6 | chromosome replication initiation inhibitor protein (NCBI) | compare |
| b1704 | aroH | +0.3 | 1.5 | 3-deoxy-D-arabino-heptulosonate-7-phosphate synthase, tryptophan repressible (NCBI) | compare |
| b1587 | ynfE | +0.3 | 2.0 | oxidoreductase subunit (NCBI) | compare |
| b0493 | ybbO | +0.3 | 1.4 | short chain dehydrogenase (NCBI) | compare |
| b0523 | purE | +0.3 | 1.2 | phosphoribosylaminoimidazole carboxylase catalytic subunit (NCBI) | compare |
| b0549 | ybcO | +0.3 | 0.9 | DLP12 prophage; predicted protein (NCBI) | compare |
| b0230 | mbhA | +0.3 | 1.9 | putative motility protein (VIMSS) | compare |
| b0696 | kdpC | +0.3 | 0.9 | potassium-transporting ATPase subunit C (NCBI) | compare |
| b3858 | yihD | +0.3 | 1.0 | hypothetical protein (NCBI) | compare |
| b2422 | cysA | +0.3 | 1.9 | sulfate/thiosulfate transporter subunit (NCBI) | compare |
| b2813 | mltA | +0.3 | 2.3 | membrane-bound lytic murein transglycosylase A (NCBI) | compare |
| b2771 | ygcS | +0.3 | 1.7 | putative transport protein (VIMSS) | compare |
| b2213 | ada | +0.3 | 1.3 | fused DNA-binding transcriptional dual regulator/O6-methylguanine-DNA methyltransferase (NCBI) | compare |
| b0751 | pnuC | +0.3 | 1.7 | predicted nicotinamide mononucleotide transporter (NCBI) | compare |
| b2171 | yeiP | +0.3 | 1.5 | putative elongation factor (VIMSS) | compare |
| b2432 | yfeY | +0.3 | 0.8 | hypothetical protein (NCBI) | compare |
| b1843 | yobB | +0.3 | 1.5 | hypothetical protein (NCBI) | compare |
| b4394 | yjjX | +0.3 | 0.7 | orf, hypothetical protein (VIMSS) | compare |
| b1931 | yedK | +0.3 | 1.1 | hypothetical protein (NCBI) | compare |