Experiment set10IT055 for Agrobacterium fabrum C58

Compare to:

1,4-Butanediol carbon source

200 most detrimental genes:

  gene name fitness t score description  
Atu4896 +1.0 2.6 acetyltransferase compare
Atu1847 +0.7 1.9 hypothetical protein compare
Atu1354 +0.7 1.5 6-hydroxymethyl-7,8-dihydropterin pyrophosphokinase compare
Atu2204 +0.7 2.1 hypothetical protein compare
Atu4897 +0.7 1.3 hypothetical protein compare
Atu5121 +0.7 5.6 two component response regulator compare
Atu0769 +0.7 1.1 protoheme IX farnesyltransferase compare
Atu2442 +0.6 1.6 hypothetical protein compare
Atu2282 +0.6 3.0 thymidine kinase compare
Atu3598 +0.6 1.9 thiol:disulfide interchange protein compare
Atu1573 +0.6 1.4 hypothetical protein compare
Atu4890 +0.6 1.5 IS426 transposase compare
Atu1213 +0.6 2.3 hypothetical protein compare
Atu3008 +0.6 0.7 hypothetical protein compare
Atu3071 +0.6 2.9 hypothetical protein compare
Atu3031 +0.6 1.1 hypothetical protein compare
Atu3387 +0.6 2.3 sigma factor compare
Atu5045 +0.5 2.1 hypothetical protein compare
Atu3468 +0.5 0.6 hypothetical protein compare
Atu3160 +0.5 2.4 hypothetical protein compare
Atu0386 +0.5 1.5 hypothetical protein compare
Atu0524 +0.5 3.0 transcriptional regulator, LuxR family compare
Atu0544 +0.5 1.2 hypothetical protein compare
Atu4677 +0.5 0.9 hypothetical protein compare
Atu3667 +0.5 2.1 aspartate alpha-decarboxylase compare
Atu1184 +0.5 2.0 hypothetical protein compare
Atu1483 +0.5 2.2 cytochrome b561 compare
Atu0976 +0.5 1.0 cycL protein compare
Atu0435 +0.5 1.5 tRNA-Gly compare
Atu2084 +0.4 0.5 hypothetical protein compare
Atu8017 +0.4 1.2 hypothetical protein compare
Atu0328 +0.4 2.8 heat-inducible transcription repressor compare
Atu1301 +0.4 1.3 hypothetical protein compare
Atu8087 +0.4 0.5 putative peptidoglycan binding protein compare
Atu4819 +0.4 2.2 hypothetical protein compare
Atu1634 +0.4 0.8 hypothetical protein compare
Atu1170 +0.4 2.6 RhtB family transporter compare
Atu0419 +0.4 1.2 two component sensor kinase compare
Atu1968 +0.4 1.1 hypothetical protein compare
Atu0026 +0.4 0.7 hypothetical protein compare
Atu2561 +0.4 2.4 ABC transporter, substrate binding protein (molybdate) compare
Atu1607 +0.4 1.8 DNA repair protein compare
Atu8185 +0.4 1.3 hypothetical protein compare
Atu0566 +0.4 1.2 hypothetical protein compare
Atu8156 +0.4 1.3 hypothetical protein compare
Atu3730 +0.4 0.5 hypothetical protein compare
Atu1260 +0.4 1.0 hypothetical protein compare
Atu1490 +0.4 1.4 arsenate reductase compare
Atu3632 +0.4 1.2 hypothetical protein compare
Atu5513 +0.4 0.9 cold shock protein compare
Atu4027 +0.4 1.8 cytochrome c2 compare
Atu2450 +0.4 1.7 hypothetical protein compare
Atu3759 +0.4 0.9 hypothetical protein compare
Atu0869 +0.4 2.4 hypothetical protein compare
Atu8176 +0.4 1.1 hypothetical protein compare
Atu1865 +0.4 1.4 hypothetical protein compare
Atu1338 +0.4 2.4 3-oxoacyl-(acyl carrier protein) reductase compare
Atu5010 +0.4 1.8 hypothetical protein compare
Atu2135 +0.4 1.9 transcriptional regulator, TetR family compare
Atu2472 +0.4 0.9 hypothetical protein compare
Atu2352 +0.4 0.8 hypothetical protein compare
Atu0124 +0.4 2.0 hypothetical protein compare
Atu3052 +0.4 1.7 MarR family transcriptional regulator compare
Atu0630 +0.4 1.2 hypothetical protein compare
Atu1052 +0.4 1.6 hypothetical protein compare
Atu5115 +0.4 1.2 hypothetical protein compare
Atu4162 +0.4 2.3 two-component response regulator compare
Atu0802 +0.4 2.5 hypothetical protein compare
Atu4894 +0.4 1.9 transposase compare
Atu4630 +0.4 0.8 hypothetical protein compare
Atu5207 +0.3 2.3 hypothetical protein compare
Atu8035 +0.3 0.8 hypothetical protein compare
Atu2216 +0.3 2.3 Xaa-Pro dipeptidase compare
Atu1287 +0.3 1.2 hypothetical protein compare
Atu3569 +0.3 1.4 hypothetical protein compare
Atu2486 +0.3 2.3 cardiolipin synthase compare
Atu5157 +0.3 1.2 hypothetical protein compare
Atu0847 +0.3 1.6 organic hydroperoxide resistance protein compare
Atu0211 +0.3 1.9 hypothetical protein compare
Atu4406 +0.3 0.8 periplasmic nitrate reductase, ferredoxin-like protein compare
Atu0936 +0.3 1.7 methyltransferase compare
Atu2407 +0.3 0.9 urease gamma subunit compare
Atu5145 +0.3 1.0 acetyltransferase compare
Atu1878 +0.3 1.7 hypothetical protein compare
Atu1525 +0.3 1.3 hypothetical protein compare
Atu3193 +0.3 1.8 MarR family transcriptional regulator compare
Atu5496 +0.3 2.1 TetR family transcriptional regulator compare
Atu0225 +0.3 0.5 hypothetical protein compare
Atu5046 +0.3 1.1 hypothetical protein compare
Atu1952 +0.3 0.8 hypothetical protein compare
Atu4527 +0.3 0.8 hypothetical protein compare
Atu3523 +0.3 1.5 polysaccharide biosynthesis-like protein compare
Atu4540 +0.3 1.3 protocatechuate 3,4-dioxygenase subunit beta compare
Atu8195 +0.3 0.9 hypothetical protein compare
Atu0892 +0.3 1.7 hypothetical protein compare
Atu2729 +0.3 1.3 hypothetical protein compare
Atu2812 +0.3 1.7 hypothetical protein compare
Atu0583 +0.3 1.8 hypothetical protein compare
Atu1857 +0.3 2.1 inositol monophosphatase family protein compare
Atu3609 +0.3 1.9 1-acyl-sn-glycerol-3-phosphate acyltransferase compare
Atu3657 +0.3 1.5 hypothetical protein compare
Atu1836 +0.3 0.7 hypothetical protein compare
Atu3861 +0.3 1.4 acyl-CoA hydrolase compare
Atu4811 +0.3 2.0 UDP-phosphate alpha N-acetylglucosaminyltransferase compare
Atu3571 +0.3 2.1 hypothetical protein compare
Atu6173 +0.3 1.4 component of type IV secretion system compare
Atu0319 +0.3 0.6 ubiquinone biosynthesis protein compare
Atu0732 +0.3 2.1 acyl-CoA dehydrogenase compare
Atu0812 +0.3 1.3 hypothetical protein compare
Atu0525 +0.3 1.8 transcriptional regulator, LuxR family compare
Atu0193 +0.3 1.5 glutamine synthetase compare
Atu2177 +0.3 1.3 hypothetical protein compare
Atu1133 +0.3 2.2 ribonuclease compare
Atu2708 +0.3 1.7 MFS permease compare
Atu1887 +0.3 1.7 succinoglycan biosynthesis protein compare
Atu1388 +0.3 2.0 ABC transporter, substrate binding protein (amino acid) compare
Atu5186 +0.3 1.1 hypothetical protein compare
Atu3697 +0.3 1.5 ATP-dependent protease LA 2 compare
Atu2235 +0.3 0.8 hypothetical protein compare
Atu4144 +0.3 0.4 hypothetical protein compare
Atu2657 +0.3 0.9 hypothetical protein compare
Atu0540 +0.3 1.5 hypothetical protein compare
Atu5169 +0.3 1.4 type IV secretion protein AvhB8 compare
Atu4033 +0.3 1.9 sugar ABC transporter substrate-binding protein compare
Atu3006 +0.3 0.9 hypothetical protein compare
Atu2388 +0.3 1.4 ABC transporter, nucleotide binding/ATPase protein (nitrate) compare
Atu1858 +0.3 1.4 hypothetical protein compare
Atu0142 +0.3 0.5 cytochrome o ubiquinol oxidase subunit II compare
Atu1838 +0.3 1.5 ABC transporter, substrate binding protein (amino acid) compare
Atu0460 +0.3 1.7 hypothetical protein compare
Atu0772 +0.3 1.7 hypothetical protein compare
Atu1366 +0.3 1.4 hypothetical protein compare
Atu5172 +0.3 1.9 type IV secretion protein AvhB11 compare
Atu3776 +0.3 1.6 hypothetical protein compare
Atu0796 +0.3 1.6 putative peptidase compare
Atu0805 +0.3 1.6 hypothetical protein compare
Atu0594 +0.3 2.1 alpha-glucosidase compare
Atu4701 +0.3 1.8 oligopeptide ABC transporter ATPase compare
Atu1626 +0.3 1.5 NAD dependent epimerase/dehydratase family protein compare
Atu3010 +0.3 1.5 hypothetical protein compare
Atu4662 +0.3 1.6 oligopeptide ABC transporter permease compare
Atu0585 +0.3 0.7 hypothetical protein compare
Atu4223 +0.3 0.8 sarcosine oxidase delta subunit compare
Atu1320 +0.3 2.0 acetyltransferase compare
Atu3786 +0.3 1.7 two component response regulator compare
Atu3327 +0.3 1.2 succinoglycan exopolysaccharide synthesis protein compare
Atu5470 +0.3 0.6 hypothetical protein compare
Atu1110 +0.3 1.0 cytosol aminopeptidase compare
Atu2290 +0.3 1.6 probable acetyltransferase compare
Atu4076 +0.3 1.4 glucose-1-phosphate adenylyltransferase compare
Atu5183 +0.3 1.7 hypothetical protein compare
Atu3242 +0.3 1.4 hypothetical protein compare
Atu0485 +0.3 1.0 hypothetical protein compare
Atu1349 +0.3 1.5 hypothetical protein compare
Atu8143 +0.3 1.2 hypothetical protein compare
Atu4171 +0.3 1.7 cold-shock dead-box protein A compare
Atu1175 +0.2 0.6 hypothetical protein compare
Atu5158 +0.2 1.4 hypothetical protein compare
Atu0657 +0.2 1.8 hypothetical protein compare
Atu2164 +0.2 1.3 hypothetical protein compare
Atu3603 +0.2 0.9 two component response regulator compare
Atu3171 +0.2 1.6 sugar ABC transporter ATPase compare
Atu3827 +0.2 1.6 LysR family transcriptional regulator compare
Atu1737 +0.2 0.8 hypothetical protein compare
Atu0234 +0.2 1.6 conserved hypothetical protein, membrane protein compare
Atu3447 +0.2 1.1 hypothetical protein compare
Atu2278 +0.2 1.8 transcriptional regulator, ArsR family compare
Atu4850 +0.2 1.5 hypothetical protein compare
Atu3575 +0.2 1.4 xylose ABC transporter permease compare
Atu1501 +0.2 1.1 hypothetical protein compare
Atu8169 +0.2 1.3 hypothetical protein compare
Atu0879 +0.2 1.6 RhtB family transporter compare
Atu1565 +0.2 0.8 serine acetyltransferase compare
Atu2193 +0.2 0.4 hypothetical protein compare
Atu1517 +0.2 1.4 hypothetical protein compare
Atu5515 +0.2 1.2 hypothetical protein compare
Atu1662 +0.2 1.6 hypothetical protein compare
Atu1150 +0.2 1.8 hypothetical protein compare
Atu1832 +0.2 1.9 membrane protein associated metalloendopeptidase compare
Atu8023 +0.2 0.8 hypothetical protein compare
Atu0955 +0.2 1.3 hypothetical protein compare
Atu0332 +0.2 1.5 RNA polymerase sigma-54 factor compare
Atu0303 +0.2 0.7 hypothetical protein compare
Atu4544 +0.2 1.7 4-hydroxybenzoate 3-monooxygenase compare
Atu0763 +0.2 1.2 hydrolase compare
Atu2013 +0.2 1.5 ABC transporter, membrane spanning protein compare
Atu1321 +0.2 1.2 hypothetical protein compare
Atu1888 +0.2 1.8 two component sensor kinase compare
Atu3652 +0.2 1.7 hypothetical protein compare
Atu4668 +0.2 1.5 ABC transporter permease compare
Atu1023 +0.2 0.7 hypothetical protein compare
Atu1911 +0.2 1.5 hypothetical protein compare
Atu1903 +0.2 1.7 glycerol kinase 2 compare
Atu3454 +0.2 1.2 arylesterase compare
Atu2308 +0.2 1.2 d-beta-hydroxybutyrate dehydrogenase compare
Atu0262 +0.2 1.3 acetyltransferase compare
Atu4023 +0.2 1.4 ferrichrome ABC transporter substrate-binding protein compare
Atu0277 +0.2 1.3 hypothetical protein compare
Atu3847 +0.2 1.3 hypothetical protein compare
Atu2517 +0.2 1.5 ABC transporter, membrane spanning protein (dipeptide) compare


Specific Phenotypes

For 4 genes in this experiment

For carbon source 1,4-Butanediol in Agrobacterium fabrum C58

For carbon source 1,4-Butanediol across organisms