| | gene | name | fitness | t score | description | |
|---|
| b0463 | acrA | -4.9 | -10.9 | multidrug efflux system (NCBI) | compare |
| b0462 | acrB | -4.7 | -17.5 | multidrug efflux system protein (NCBI) | compare |
| b0903 | pflB | -4.4 | -12.7 | pyruvate formate lyase I (NCBI) | compare |
| b3163 | nlpI | -4.1 | -4.0 | hypothetical protein (NCBI) | compare |
| b4509 | ylcG | -3.9 | -3.8 | DLP12 prophage; predicted protein (NCBI) | compare |
| b0902 | pflA | -3.9 | -9.0 | pyruvate formate lyase activating enzyme 1 (NCBI) | compare |
| b0677 | nagA | -3.7 | -5.6 | N-acetylglucosamine-6-phosphate deacetylase (NCBI) | compare |
| b2512 | yfgL | -3.7 | -6.5 | protein assembly complex, lipoprotein component (NCBI) | compare |
| b1334 | fnr | -3.6 | -3.4 | DNA-binding transcriptional dual regulator, global regulator of anaerobic growth (NCBI) | compare |
| b3035 | tolC | -3.5 | -8.5 | outer membrane channel; specific tolerance to colicin E1; segregation of daughter chromosomes (VIMSS) | compare |
| b2188 | yejM | -3.5 | -11.4 | predicted hydrolase, inner membrane (NCBI) | compare |
| b4025 | pgi | -3.3 | -8.6 | glucose-6-phosphate isomerase (NCBI) | compare |
| b3620 | rfaF | -3.3 | -5.0 | ADP-heptose:LPS heptosyltransferase II (NCBI) | compare |
| b3052 | rfaE | -3.2 | -3.8 | fused heptose 7-phosphate kinase/heptose 1-phosphate adenyltransferase (NCBI) | compare |
| b0145 | dksA | -3.1 | -3.0 | DNA-binding transcriptional regulator of rRNA transcription, DnaK suppressor protein (NCBI) | compare |
| b0053 | surA | -3.1 | -2.1 | peptidyl-prolyl cis-trans isomerase (PPIase) (NCBI) | compare |
| b0222 | lpcA | -3.0 | -2.9 | phosphoheptose isomerase (NCBI) | compare |
| b2617 | smpA | -2.9 | -4.3 | small membrane protein A (VIMSS) | compare |
| b3842 | rfaH | -2.9 | -6.4 | transcriptional activator RfaH (NCBI) | compare |
| b3341 | rpsG | -2.8 | -1.9 | 30S ribosomal protein S7 (NCBI) | compare |
| b1830 | prc | -2.8 | -5.2 | carboxy-terminal protease for penicillin-binding protein 3 (NCBI) | compare |
| b3199 | yrbK | -2.7 | -3.6 | hypothetical protein (NCBI) | compare |
| b0178 | hlpA | -2.7 | -5.3 | periplasmic chaperone (NCBI) | compare |
| b2620 | smpB | -2.6 | -1.8 | SsrA-binding protein (NCBI) | compare |
| b2501 | ppk | -2.6 | -10.1 | polyphosphate kinase (NCBI) | compare |
| b3631 | rfaG | -2.6 | -11.9 | glucosyltransferase I (NCBI) | compare |
| b2494 | yfgC | -2.6 | -8.7 | predicted peptidase (NCBI) | compare |
| b0239 | frsA | -2.4 | -10.3 | fermentation/respiration switch protein (NCBI) | compare |
| b3621 | rfaC | -2.4 | -4.3 | ADP-heptose:LPS heptosyl transferase I (NCBI) | compare |
| b4237 | nrdG | -2.4 | -10.2 | anaerobic ribonucleotide reductase activating protein (NCBI) | compare |
| b4535 | yniD | -2.4 | -1.6 | predicted protein (RefSeq) | compare |
| b3632 | rfaQ | -2.4 | -16.3 | lipopolysaccharide core biosynthesis protein (NCBI) | compare |
| b1831 | proQ | -2.3 | -5.7 | putative solute/DNA competence effector (NCBI) | compare |
| b3630 | rfaP | -2.3 | -7.8 | kinase that phosphorylates core heptose of lipopolysaccharide (NCBI) | compare |
| b0739 | tolA | -2.2 | -2.1 | cell envelope integrity inner membrane protein TolA (NCBI) | compare |
| b4238 | nrdD | -2.2 | -15.2 | anaerobic ribonucleoside triphosphate reductase (NCBI) | compare |
| b4701 | sokX | -2.2 | -1.5 | sok-related sRNA, function unknown (RefSeq) | compare |
| b3198 | kdsC | -2.2 | -4.3 | 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase (NCBI) | compare |
| b3619 | rfaD | -2.2 | -2.9 | ADP-L-glycero-D-mannoheptose-6-epimerase, NAD(P)-binding (NCBI) | compare |
| b0014 | dnaK | -2.1 | -2.0 | molecular chaperone DnaK (NCBI) | compare |
| b1677 | lpp | -2.1 | -2.7 | murein lipoprotein (NCBI) | compare |
| b0957 | ompA | -2.1 | -2.9 | outer membrane protein A (3a;II*;G;d) (NCBI) | compare |
| b0741 | pal | -2.0 | -3.7 | peptidoglycan-associated outer membrane lipoprotein (NCBI) | compare |
| b1236 | galU | -2.0 | -3.7 | glucose-1-phosphate uridylyltransferase (NCBI) | compare |
| b3021 | ygiT | -1.9 | -2.8 | predicted DNA-binding transcriptional regulator (NCBI) | compare |
| b4631 | ykgQ | -1.9 | -2.5 | no description | compare |
| b1863 | ruvC | -1.9 | -2.1 | Holliday junction resolvase (NCBI) | compare |
| b2064 | asmA | -1.9 | -3.3 | predicted assembly protein (NCBI) | compare |
| b4592 | yccB | -1.8 | -2.1 | hypothetical protein (RefSeq) | compare |
| b3930 | menA | -1.7 | -12.0 | 1,4-dihydroxy-2-naphthoate octaprenyltransferase (NCBI) | compare |
| b2363 | yfdT | -1.7 | -2.9 | CPS-53 (KpLE1) prophage; predicted protein (NCBI) | compare |
| b0688 | pgm | -1.7 | -3.4 | phosphoglucomutase (NCBI) | compare |
| b1847 | yebF | -1.7 | -1.9 | predicted protein (RefSeq) | compare |
| b1530 | marR | -1.6 | -4.8 | multiple antibiotic resistance protein; repressor of mar operon (VIMSS) | compare |
| b1855 | lpxM | -1.6 | -5.1 | lipid A biosynthesis (KDO)2-(lauroyl)-lipid IVA acyltransferase (NCBI) | compare |
| b0783 | moaC | -1.6 | -5.7 | molybdenum cofactor biosynthesis protein C (NCBI) | compare |
| b0740 | tolB | -1.6 | -3.7 | translocation protein TolB precursor (NCBI) | compare |
| b0738 | tolR | -1.6 | -1.8 | membrane spanning protein in TolA-TolQ-TolR complex (NCBI) | compare |
| b0436 | tig | -1.6 | -7.4 | trigger factor (NCBI) | compare |
| b1936 | intG | -1.6 | -1.0 | predicted defective phage integrase (pseudogene) (RefSeq) | compare |
| b1861 | ruvA | -1.6 | -1.0 | Holliday junction DNA helicase motor protein (NCBI) | compare |
| b4603 | rseX | -1.5 | -1.1 | sRNA regulating ompA and ompC translation, with Hfq (RefSeq) | compare |
| b2830 | nudH | -1.5 | -1.4 | dinucleoside polyphosphate hydrolase (NCBI) | compare |
| b3443 | yrhA | -1.5 | -1.7 | orf, hypothetical protein (VIMSS) | compare |
| b0706 | ybfD | -1.5 | -1.4 | hypothetical protein (NCBI) | compare |
| b3229 | sspA | -1.5 | -2.4 | stringent starvation protein A (NCBI) | compare |
| b0049 | apaH | -1.5 | -2.8 | diadenosinetetraphosphatase (NCBI) | compare |
| b3390 | aroK | -1.5 | -2.1 | shikimate kinase I (NCBI) | compare |
| b1493 | gadB | -1.5 | -1.0 | glutamate decarboxylase B, PLP-dependent (NCBI) | compare |
| b2576 | srmB | -1.5 | -2.3 | ATP-dependent RNA helicase (NCBI) | compare |
| b1259 | yciG | -1.5 | -1.6 | orf, hypothetical protein (VIMSS) | compare |
| b1823 | cspC | -1.4 | -1.6 | stress protein, member of the CspA-family (NCBI) | compare |
| b1550 | b1550 | -1.4 | -1.6 | orf, hypothetical protein (VIMSS) | compare |
| b3839 | tatC | -1.4 | -5.7 | TatABCE protein translocation system subunit (NCBI) | compare |
| b2528 | iscA | -1.4 | -1.8 | iron-sulfur cluster assembly protein (NCBI) | compare |
| b3636 | rpmG | -1.3 | -1.9 | 50S ribosomal protein L33 (NCBI) | compare |
| b1150 | ymfR | -1.3 | -1.1 | e14 prophage; predicted protein (NCBI) | compare |
| b0890 | ftsK | -1.3 | -2.1 | DNA-binding membrane protein required for chromosome resolution and partitioning (NCBI) | compare |
| b2168 | fruK | -1.3 | -1.1 | 1-phosphofructokinase (NCBI) | compare |
| b2567 | rnc | -1.3 | -0.8 | ribonuclease III (NCBI) | compare |
| b4221 | ytfN | -1.3 | -10.6 | hypothetical protein (NCBI) | compare |
| b3405 | ompR | -1.3 | -3.8 | osmolarity response regulator (NCBI) | compare |
| b4503 | yafF | -1.3 | -0.8 | no description | compare |
| b3761 | trpT | -1.3 | -1.6 | tRNA-Trp (NCBI) | compare |
| b1361 | ydaW | -1.3 | -0.9 | orf, hypothetical protein (VIMSS) | compare |
| b1161 | ycgX | -1.3 | -0.8 | hypothetical protein (NCBI) | compare |
| b0226 | dinJ | -1.3 | -4.4 | predicted antitoxin of YafQ-DinJ toxin-antitoxin system (NCBI) | compare |
| b0001 | thrL | -1.3 | -2.7 | thr operon leader peptide (NCBI) | compare |
| b0730 | mngR | -1.3 | -1.4 | DNA-binding transcriptional dual regulator, fatty-acyl-binding (NCBI) | compare |
| b0364 | yaiS | -1.3 | -2.4 | orf, hypothetical protein (VIMSS) | compare |
| b4676 | yoaK | -1.3 | -0.8 | expressed protein (RefSeq) | compare |
| b1335 | ogt | -1.3 | -2.8 | O-6-alkylguanine-DNA:cysteine-protein methyltransferase (NCBI) | compare |
| b3627 | rfaI | -1.2 | -6.1 | UDP-D-galactose:(glucosyl)lipopolysaccharide- alpha-1,3-D-galactosyltransferase (NCBI) | compare |
| b2553 | glnB | -1.2 | -4.1 | regulatory protein P-II for glutamine synthetase (NCBI) | compare |
| b4201 | priB | -1.2 | -2.4 | primosomal replication protein N (NCBI) | compare |
| b1346 | ydaQ | -1.2 | -1.3 | orf, hypothetical protein (VIMSS) | compare |
| b2935 | tktA | -1.2 | -0.8 | transketolase 1, thiamin-binding (NCBI) | compare |
| b3726 | pstA | -1.2 | -3.5 | phosphate transporter subunit (NCBI) | compare |
| b2894 | xerD | -1.2 | -0.8 | site-specific tyrosine recombinase XerD (NCBI) | compare |
| b3609 | secB | -1.2 | -3.5 | export protein SecB (NCBI) | compare |
| b0200 | gmhB | -1.2 | -0.8 | hypothetical protein (NCBI) | compare |
| b0827 | moeA | -1.2 | -4.5 | molybdopterin biosynthesis protein (NCBI) | compare |
| b0785 | moaE | -1.2 | -4.6 | molybdopterin synthase, large subunit (NCBI) | compare |
| b1368 | ynaA | -1.2 | -2.0 | Rac prophage; predicted tail protein (RefSeq) | compare |
| b0232 | yafN | -1.2 | -0.7 | predicted antitoxin of the YafO-YafN toxin-antitoxin system (NCBI) | compare |
| b0564 | appY | -1.2 | -1.1 | DLP12 prophage; DNA-binding transcriptional activator (NCBI) | compare |
| b2141 | yohJ | -1.2 | -2.8 | hypothetical protein (NCBI) | compare |
| b2808 | gcvA | -1.2 | -2.8 | DNA-binding transcriptional dual regulator (NCBI) | compare |
| b0847 | ybjL | -1.2 | -6.7 | hypothetical protein (NCBI) | compare |
| b0547 | ybcN | -1.2 | -2.4 | DLP12 prophage; predicted protein (NCBI) | compare |
| b3387 | dam | -1.1 | -7.0 | DNA adenine methylase (NCBI) | compare |
| b2820 | recB | -1.1 | -0.8 | exonuclease V (RecBCD complex), beta subunit (NCBI) | compare |
| b4220 | ytfM | -1.1 | -7.4 | predicted outer membrane protein and surface antigen (NCBI) | compare |
| b2369 | evgA | -1.1 | -1.9 | DNA-binding response regulator in two-component regulatory system with EvgS (NCBI) | compare |
| b0929 | ompF | -1.1 | -4.0 | outer membrane porin 1a (Ia;b;F) (NCBI) | compare |
| b1730 | ydjO | -1.1 | -0.7 | predicted protein (RefSeq) | compare |
| b0357 | yaiN | -1.1 | -2.0 | putative alpha helix chain (VIMSS) | compare |
| b1124 | potC | -1.1 | -4.2 | spermidine/putrescine ABC transporter membrane protein (NCBI) | compare |
| b2531 | iscR | -1.1 | -1.0 | DNA-binding transcriptional repressor (NCBI) | compare |
| b3600 | mtlD | -1.1 | -5.8 | mannitol-1-phosphate 5-dehydrogenase (NCBI) | compare |
| b0548 | ninE | -1.1 | -2.0 | DLP12 prophage; conserved protein (NCBI) | compare |
| b4375 | prfC | -1.1 | -1.9 | peptide chain release factor 3 (NCBI) | compare |
| b3644 | yicC | -1.1 | -4.5 | hypothetical protein (NCBI) | compare |
| b0423 | thiI | -1.1 | -4.0 | thiamine biosynthesis protein ThiI (NCBI) | compare |
| b1542 | ydfI | -1.1 | -3.4 | predicted mannonate dehydrogenase (NCBI) | compare |
| b3857 | mobA | -1.1 | -5.1 | molybdopterin-guanine dinucleotide biosynthesis protein A (NCBI) | compare |
| b4146 | yjeK | -1.1 | -0.7 | predicted lysine aminomutase (NCBI) | compare |
| b2215 | ompC | -1.1 | -5.9 | outer membrane porin protein C (NCBI) | compare |
| b1676 | pykF | -1.1 | -2.9 | pyruvate kinase (NCBI) | compare |
| b4000 | hupA | -1.1 | -3.8 | HU, DNA-binding transcriptional regulator, alpha subunit (NCBI) | compare |
| b4585 | sroB | -1.0 | -1.1 | Novel sRNA, function unknown (RefSeq) | compare |
| b0707 | ybgA | -1.0 | -3.3 | hypothetical protein (NCBI) | compare |
| b4239 | treC | -1.0 | -1.0 | trehalose-6-P hydrolase (NCBI) | compare |
| b0764 | modB | -1.0 | -3.4 | molybdate ABC transporter permease protein (NCBI) | compare |
| b0949 | uup | -1.0 | -5.5 | fused predicted transporter subunits of ABC superfamily: ATP-binding components (NCBI) | compare |
| b1273 | yciN | -1.0 | -1.6 | hypothetical protein (NCBI) | compare |
| b2085 | b2085 | -1.0 | -2.4 | orf, hypothetical protein (VIMSS) | compare |
| b4480 | hdfR | -1.0 | -4.0 | transcriptional regulator HdfR (NCBI) | compare |
| b2572 | rseA | -1.0 | -2.9 | anti-sigma factor (NCBI) | compare |
| b4570 | lomR | -1.0 | -1.0 | no description | compare |
| b2569 | lepA | -1.0 | -2.5 | GTP-binding protein LepA (NCBI) | compare |
| b0009 | mog | -1.0 | -5.5 | molybdenum cofactor biosynthesis protein (NCBI) | compare |
| b2252 | ais | -1.0 | -2.9 | hypothetical protein (NCBI) | compare |
| b0765 | modC | -1.0 | -4.0 | molybdate transporter subunit (NCBI) | compare |
| b1291 | sapD | -1.0 | -1.4 | predicted antimicrobial peptide transporter subunit (NCBI) | compare |
| b1862 | yebB | -1.0 | -2.1 | orf, hypothetical protein (VIMSS) | compare |
| b0781 | moaA | -1.0 | -4.3 | molybdenum cofactor biosynthesis protein A (NCBI) | compare |
| b1951 | rcsA | -1.0 | -0.7 | DNA-binding transcriptional activator, co-regulator with RcsB (NCBI) | compare |
| b3916 | pfkA | -1.0 | -1.4 | 6-phosphofructokinase (NCBI) | compare |
| b3587 | yiaW | -1.0 | -3.6 | conserved inner membrane protein (NCBI) | compare |
| b3250 | mreC | -1.0 | -1.6 | cell wall structural complex MreBCD transmembrane component MreC (NCBI) | compare |
| b3778 | rep | -1.0 | -4.4 | DNA helicase and single-stranded DNA-dependent ATPase (NCBI) | compare |
| b4416 | rybA | -1.0 | -1.2 | unknown RNA (NCBI) | compare |
| b0623 | cspE | -1.0 | -1.6 | cold shock protein E (NCBI) | compare |
| b1877 | yecT | -1.0 | -1.1 | orf, hypothetical protein (VIMSS) | compare |
| b4431 | rprA | -1.0 | -1.3 | Positive regulatory sRNA for RpoS translation; non-essential gene (RefSeq) | compare |
| b2142 | yohK | -1.0 | -3.7 | predicted inner membrane protein (NCBI) | compare |
| b1126 | potA | -1.0 | -4.7 | putrescine/spermidine ABC transporter ATPase protein (NCBI) | compare |
| b3811 | xerC | -0.9 | -0.6 | site-specific tyrosine recombinase XerC (NCBI) | compare |
| b1739 | osmE | -0.9 | -2.0 | DNA-binding transcriptional activator (NCBI) | compare |
| b0141 | yadN | -0.9 | -3.6 | predicted fimbrial-like adhesin protein (NCBI) | compare |
| b0729 | sucD | -0.9 | -2.8 | succinyl-CoA synthetase subunit alpha (NCBI) | compare |
| b3764 | yifE | -0.9 | -3.4 | hypothetical protein (NCBI) | compare |
| b0826 | moeB | -0.9 | -4.4 | molybdopterin biosynthesis protein MoeB (NCBI) | compare |
| b3082 | ygjM | -0.9 | -1.3 | predicted DNA-binding transcriptional regulator (NCBI) | compare |
| b3469 | zntA | -0.9 | -4.4 | zinc, cobalt and lead efflux system (NCBI) | compare |
| b2433 | b2433 | -0.9 | -2.0 | orf, hypothetical protein (VIMSS) | compare |
| b1824 | yobF | -0.9 | -2.1 | hypothetical protein (NCBI) | compare |
| b2330 | yfcB | -0.9 | -1.2 | putative adenine-specific methylase (VIMSS) | compare |
| b1249 | cls | -0.9 | -4.3 | cardiolipin synthetase (NCBI) | compare |
| b1021 | ycdP | -0.9 | -3.2 | predicted inner membrane protein (NCBI) | compare |
| b1429 | tehA | -0.9 | -0.9 | potassium-tellurite ethidium and proflavin transporter (NCBI) | compare |
| b1536 | ydeI | -0.9 | -0.6 | hypothetical protein (NCBI) | compare |
| b3963 | fabR | -0.9 | -5.5 | DNA-binding transcriptional repressor (RefSeq) | compare |
| b1506 | yneL | -0.9 | -0.7 | predicted transcriptional regulator (NCBI) | compare |
| b1241 | adhE | -0.9 | -5.6 | fused acetaldehyde-CoA dehydrogenase/iron-dependent alcohol dehydrogenase/pyruvate-formate lyase deactivase (NCBI) | compare |
| b0868 | b0868 | -0.9 | -4.9 | putative nucleotide di-P-sugar epimerase or dehydratase (VIMSS) | compare |
| b1567 | intK | -0.9 | -1.8 | Qin prophage; predicted protein (RefSeq) | compare |
| b0460 | hha | -0.9 | -2.7 | modulator of gene expression, with H-NS (NCBI) | compare |
| b4101 | phnG | -0.9 | -2.6 | carbon-phosphorus lyase complex subunit (NCBI) | compare |
| b4179 | vacB | -0.9 | -3.2 | putative enzyme (VIMSS) | compare |
| b0904 | focA | -0.9 | -3.2 | formate transporter (NCBI) | compare |
| b1278 | pgpB | -0.9 | -1.9 | phosphatidylglycerophosphatase B (NCBI) | compare |
| b1160 | elbA | -0.9 | -0.5 | hypothetical protein (NCBI) | compare |
| b1454 | yncG | -0.8 | -1.6 | predicted enzyme (NCBI) | compare |
| b4181 | yjfI | -0.8 | -1.8 | hypothetical protein (NCBI) | compare |
| b3649 | rpoZ | -0.8 | -1.5 | DNA-directed RNA polymerase subunit omega (NCBI) | compare |
| b4699 | fnrS | -0.8 | -0.7 | FNR-activated anaerobic sRNA antisense regulator down regulates cydDC, metE, sodA, sodB, Hfq-dependent; mediates negative FNR regulation (RefSeq) | compare |
| b1176 | minC | -0.8 | -2.0 | septum formation inhibitor (NCBI) | compare |
| b1557 | cspB | -0.8 | -1.4 | Qin prophage; cold shock protein (NCBI) | compare |
| b2017 | yefM | -0.8 | -1.3 | orf, hypothetical protein (VIMSS) | compare |
| b1357 | ydaS | -0.8 | -1.7 | Rac prophage; predicted DNA-binding transcriptional regulator (NCBI) | compare |
| b3628 | rfaB | -0.8 | -4.5 | UDP-D-galactose:(glucosyl)lipopolysaccharide-1, 6-D-galactosyltransferase (RefSeq) | compare |
| b3999 | yjaG | -0.8 | -3.1 | hypothetical protein (NCBI) | compare |
| b2241 | glpA | -0.8 | -5.7 | sn-glycerol-3-phosphate dehydrogenase (anaerobic), large subunit, FAD/NAD(P)-binding (NCBI) | compare |
| b1572 | ydfB | -0.8 | -1.3 | orf, hypothetical protein (VIMSS) | compare |
| b1159 | mcrA | -0.8 | -0.5 | e14 prophage; 5-methylcytosine-specific restriction endonuclease B (NCBI) | compare |
| b1860 | ruvB | -0.8 | -0.5 | Holliday junction DNA helicase B (NCBI) | compare |
| b2271 | yfbL | -0.8 | -3.3 | putative aminopeptidase (VIMSS) | compare |
| b0082 | mraW | -0.8 | -1.8 | S-adenosyl-methyltransferase (NCBI) | compare |