| | gene | name | fitness | t score | description | |
|---|
| b3977 | tyrU | +2.0 | 2.7 | tRNA-Tyr (NCBI) | compare |
| b1607 | ydgC | +1.5 | 3.2 | conserved inner membrane protein associated with alginate biosynthesis (NCBI) | compare |
| b2259 | pmrD | +1.2 | 1.6 | polymyxin resistance protein B (VIMSS) | compare |
| b1865 | nudB | +1.2 | 2.0 | dATP pyrophosphohydrolase (NCBI) | compare |
| b1358 | ydaT | +1.2 | 1.4 | Rac prophage; predicted protein (NCBI) | compare |
| b2281 | nuoI | +1.2 | 3.8 | NADH dehydrogenase subunit I (NCBI) | compare |
| b1524 | yneH | +1.2 | 1.4 | predicted glutaminase (NCBI) | compare |
| b1217 | chaB | +1.1 | 1.4 | cation transport regulator (NCBI) | compare |
| b4042 | dgkA | +1.1 | 3.1 | diacylglycerol kinase (NCBI) | compare |
| b2058 | wcaB | +1.1 | 1.6 | predicted acyl transferase (NCBI) | compare |
| b4041 | plsB | +1.1 | 3.2 | glycerol-3-phosphate acyltransferase (VIMSS) | compare |
| b2614 | grpE | +1.1 | 2.0 | heat shock protein (NCBI) | compare |
| b1446 | ydcY | +1.1 | 2.8 | hypothetical protein (NCBI) | compare |
| b3205 | yhbJ | +1.0 | 4.1 | hypothetical protein (NCBI) | compare |
| b2282 | nuoH | +1.0 | 3.8 | NADH dehydrogenase subunit H (NCBI) | compare |
| b4533 | ynfO | +1.0 | 2.4 | Qin prophage; predicted protein (NCBI) | compare |
| b2688 | gshA | +1.0 | 6.3 | glutamate--cysteine ligase (NCBI) | compare |
| b1187 | fadR | +1.0 | 5.6 | fatty acid metabolism regulator (NCBI) | compare |
| b0125 | hpt | +0.9 | 4.6 | hypoxanthine phosphoribosyltransferase (VIMSS) | compare |
| b0464 | acrR | +0.9 | 6.6 | DNA-binding transcriptional repressor (NCBI) | compare |
| b1289 | ycjD | +0.9 | 2.9 | hypothetical protein (NCBI) | compare |
| b0418 | pgpA | +0.9 | 5.2 | phosphatidylglycerophosphatase A (NCBI) | compare |
| b2906 | visC | +0.9 | 4.3 | hypothetical protein (NCBI) | compare |
| b3119 | tdcR | +0.9 | 2.8 | threonine dehydratase operon activator protein (VIMSS) | compare |
| b3806 | cyaA | +0.9 | 4.7 | adenylate cyclase (NCBI) | compare |
| b1103 | ycfF | +0.9 | 1.1 | orf, hypothetical protein (VIMSS) | compare |
| b1312 | ycjP | +0.9 | 3.5 | predicted sugar transporter subunit: membrane component of ABC superfamily (NCBI) | compare |
| b2279 | nuoK | +0.8 | 1.5 | NADH dehydrogenase subunit K (NCBI) | compare |
| b2904 | gcvH | +0.8 | 2.8 | glycine cleavage system protein H (NCBI) | compare |
| b1613 | manA | +0.8 | 1.8 | mannose-6-phosphate isomerase (VIMSS) | compare |
| b3844 | fre | +0.8 | 5.1 | NAD(P)H-flavin reductase (NCBI) | compare |
| b3257 | yhdT | +0.8 | 2.6 | conserved inner membrane protein (NCBI) | compare |
| b1684 | sufA | +0.8 | 2.0 | iron-sulfur cluster assembly scaffold protein (NCBI) | compare |
| b3181 | greA | +0.8 | 2.4 | transcription elongation factor: cleaves 3' nucleotide of paused mRNA (VIMSS) | compare |
| b3192 | yrbC | +0.8 | 5.4 | predicted ABC-type organic solvent transporter (NCBI) | compare |
| b3193 | yrbD | +0.8 | 5.2 | predicted ABC-type organic solvent transporter (NCBI) | compare |
| b2096 | gatY | +0.7 | 3.8 | tagatose-bisphosphate aldolase 1 (VIMSS) | compare |
| b1095 | fabF | +0.7 | 4.3 | 3-oxoacyl-(acyl carrier protein) synthase (NCBI) | compare |
| b4241 | treR | +0.7 | 5.9 | trehalose repressor (NCBI) | compare |
| b0439 | lon | +0.7 | 3.3 | DNA-binding ATP-dependent protease La (NCBI) | compare |
| b3195 | yrbF | +0.7 | 5.2 | predicted toluene transporter subunit: ATP-binding component of ABC superfamily (NCBI) | compare |
| b2175 | spr | +0.7 | 3.1 | predicted peptidase, outer membrane lipoprotein (NCBI) | compare |
| b3169 | nusA | +0.7 | 1.8 | transcription elongation factor NusA (NCBI) | compare |
| b1628 | rsxB | +0.7 | 1.5 | electron transport complex protein RnfB (NCBI) | compare |
| b1038 | csgF | +0.7 | 2.1 | predicted transport protein (NCBI) | compare |
| b0682 | ybfN | +0.7 | 2.8 | predicted lipoprotein (NCBI) | compare |
| b2276 | nuoN | +0.7 | 3.6 | NADH:ubiquinone oxidoreductase, membrane subunit N (RefSeq) | compare |
| b3191 | yrbB | +0.7 | 4.9 | orf, hypothetical protein (VIMSS) | compare |
| b2083 | yegZ | +0.7 | 1.2 | orf, hypothetical protein (VIMSS) | compare |
| b3026 | qseC | +0.7 | 2.0 | sensory histidine kinase in two-component regulatory system with QseB (NCBI) | compare |
| b1667 | ydhR | +0.6 | 1.4 | hypothetical protein (NCBI) | compare |
| b3194 | yrbE | +0.6 | 5.0 | predicted toluene transporter subunit: membrane component of ABC superfamily (NCBI) | compare |
| b2318 | truA | +0.6 | 2.1 | tRNA pseudouridine synthase A (NCBI) | compare |
| b4418 | sraB | +0.6 | 1.7 | unknown RNA (NCBI) | compare |
| b0955 | ycbZ | +0.6 | 3.9 | predicted peptidase (NCBI) | compare |
| b1266 | yciV | +0.6 | 2.4 | hypothetical protein (NCBI) | compare |
| b2187 | yejL | +0.6 | 2.1 | hypothetical protein (NCBI) | compare |
| b1243 | oppA | +0.6 | 2.8 | oligopeptide transporter subunit (NCBI) | compare |
| b1891 | flhC | +0.6 | 2.1 | DNA-binding transcriptional dual regulator with FlhD (NCBI) | compare |
| b1090 | plsX | +0.6 | 2.9 | glycerolphosphate auxotrophy in plsB background (VIMSS) | compare |
| b0796 | ybiH | +0.6 | 2.1 | putative transcriptional regulator (VIMSS) | compare |
| b1143 | ymfI | +0.6 | 1.1 | orf, hypothetical protein (VIMSS) | compare |
| b0209 | yafD | +0.6 | 3.5 | hypothetical protein (NCBI) | compare |
| b0211 | mltD | +0.6 | 3.0 | predicted membrane-bound lytic murein transglycosylase D (NCBI) | compare |
| b2229 | b2229 | +0.6 | 2.3 | orf, hypothetical protein (VIMSS) | compare |
| b2951 | yggS | +0.6 | 2.7 | predicted enzyme (NCBI) | compare |
| b2283 | nuoG | +0.6 | 3.7 | NADH:ubiquinone oxidoreductase, chain G (RefSeq) | compare |
| b1526 | yneJ | +0.6 | 2.0 | predicted DNA-binding transcriptional regulator (NCBI) | compare |
| b1185 | dsbB | +0.6 | 1.9 | reoxidizes DsbA protein following formation of disulfide bond in P-ring of flagella. (VIMSS) | compare |
| b1253 | yciA | +0.6 | 1.8 | predicted hydrolase (NCBI) | compare |
| b2708 | gutQ | +0.6 | 2.4 | orf, hypothetical protein (VIMSS) | compare |
| b0404 | yajB | +0.6 | 2.6 | hypothetical protein (NCBI) | compare |
| b2278 | nuoL | +0.6 | 4.0 | NADH dehydrogenase subunit L (NCBI) | compare |
| b2280 | nuoJ | +0.6 | 2.5 | NADH dehydrogenase subunit J (NCBI) | compare |
| b1728 | ydjM | +0.6 | 1.9 | predicted inner membrane protein regulated by LexA (RefSeq) | compare |
| b1582 | ynfA | +0.6 | 1.3 | hypothetical protein (NCBI) | compare |
| b0504 | ybbS | +0.6 | 2.3 | DNA-binding transcriptional activator of the allD operon (NCBI) | compare |
| b1846 | yebE | +0.6 | 2.2 | hypothetical protein (NCBI) | compare |
| b2743 | pcm | +0.6 | 2.4 | protein-L-isoaspartate O-methyltransferase (NCBI) | compare |
| b1075 | flgD | +0.6 | 2.2 | flagellar basal body rod modification protein D (NCBI) | compare |
| b2063 | yegH | +0.6 | 2.7 | putative transport protein (VIMSS) | compare |
| b1805 | fadD | +0.6 | 4.0 | acyl-CoA synthase (NCBI) | compare |
| b2659 | b2659 | +0.6 | 0.9 | orf, hypothetical protein (VIMSS) | compare |
| b1271 | yciK | +0.6 | 1.9 | short chain dehydrogenase (NCBI) | compare |
| b0632 | dacA | +0.6 | 3.6 | D-alanyl-D-alanine carboxypeptidase (penicillin-binding protein 5) (NCBI) | compare |
| b2962 | yggX | +0.6 | 1.7 | hypothetical protein (NCBI) | compare |
| b2419 | yfeK | +0.6 | 1.0 | hypothetical protein (NCBI) | compare |
| b3293 | yhdN | +0.6 | 2.5 | hypothetical protein (NCBI) | compare |
| b1915 | yecF | +0.6 | 3.1 | hypothetical protein (NCBI) | compare |
| b1412 | azoR | +0.6 | 1.7 | acyl carrier protein phosphodiesterase (NCBI) | compare |
| b1632 | rsxE | +0.6 | 3.5 | NADH-ubiquinone oxidoreductase (NCBI) | compare |
| b0942 | ycbU | +0.6 | 2.2 | predicted fimbrial-like adhesin protein (NCBI) | compare |
| b3863 | polA | +0.6 | 0.6 | DNA polymerase I (NCBI) | compare |
| b3388 | damX | +0.6 | 4.6 | hypothetical protein (NCBI) | compare |
| b1926 | fliT | +0.5 | 2.0 | predicted chaperone (NCBI) | compare |
| b0912 | ihfB | +0.5 | 2.1 | integration host factor subunit beta (NCBI) | compare |
| b0965 | b0965 | +0.5 | 1.3 | orf, hypothetical protein (VIMSS) | compare |
| b0926 | ycbK | +0.5 | 3.2 | hypothetical protein (NCBI) | compare |
| b3555 | yiaG | +0.5 | 1.9 | predicted transcriptional regulator (NCBI) | compare |
| b0431 | cyoB | +0.5 | 4.3 | cytochrome o ubiquinol oxidase subunit I (NCBI) | compare |
| b1171 | b1171 | +0.5 | 1.4 | orf, hypothetical protein (VIMSS) | compare |
| b1630 | rsxD | +0.5 | 2.9 | electron transport complex protein RnfD (NCBI) | compare |
| b0430 | cyoC | +0.5 | 1.8 | cytochrome o ubiquinol oxidase subunit III (NCBI) | compare |
| b2080 | b2080 | +0.5 | 1.3 | orf, hypothetical protein (VIMSS) | compare |
| b2346 | vacJ | +0.5 | 3.6 | predicted lipoprotein (NCBI) | compare |
| b2093 | gatB | +0.5 | 1.9 | galactitol-specific enzyme IIB component of PTS (NCBI) | compare |
| b2061 | wzb | +0.5 | 1.3 | protein-tyrosine phosphatase (NCBI) | compare |
| b2286 | nuoC | +0.5 | 2.8 | NADH:ubiquinone oxidoreductase, chain C,D (RefSeq) | compare |
| b0802 | ybiJ | +0.5 | 1.3 | hypothetical protein (NCBI) | compare |
| b2684 | mprA | +0.5 | 1.7 | DNA-binding transcriptional repressor of microcin B17 synthesis and multidrug efflux (NCBI) | compare |
| b4692 | oweE | +0.5 | 1.3 | no description | compare |
| b3791 | rffA | +0.5 | 3.3 | TDP-4-oxo-6-deoxy-D-glucose transaminase (NCBI) | compare |
| b0407 | yajC | +0.5 | 1.4 | preprotein translocase subunit YajC (NCBI) | compare |
| b0018 | mokC | +0.5 | 0.9 | regulatory protein for HokC, overlaps CDS of hokC (NCBI) | compare |
| b2426 | ucpA | +0.5 | 1.2 | putative oxidoreductase (VIMSS) | compare |
| b2448 | yffQ | +0.5 | 1.7 | CPZ-55 prophage; predicted protein (RefSeq) | compare |
| b1640 | ydhH | +0.5 | 1.9 | anhydro-N-acetylmuramic acid kinase (NCBI) | compare |
| b2948 | yqgE | +0.5 | 1.8 | orf, hypothetical protein (VIMSS) | compare |
| b1853 | yebK | +0.5 | 1.1 | predicted DNA-binding transcriptional regulator (NCBI) | compare |
| b2768 | ygcP | +0.5 | 1.9 | predicted anti-terminator regulatory protein (NCBI) | compare |
| b2835 | ygeD | +0.5 | 3.3 | predicted inner membrane protein (NCBI) | compare |
| b0858 | ybjO | +0.5 | 1.2 | predicted inner membrane protein (NCBI) | compare |
| b3068 | ygjF | +0.5 | 1.4 | G/U mismatch-specific DNA glycosylase (NCBI) | compare |
| b3029 | ygiN | +0.5 | 1.1 | quinol monooxygenase (NCBI) | compare |
| b2258 | b2258 | +0.5 | 0.9 | putative transport/receptor protein (VIMSS) | compare |
| b2517 | yfgB | +0.5 | 2.9 | predicted enzyme (NCBI) | conserved |
| b0746 | valZ | +0.5 | 0.6 | tRNA-Val (NCBI) | compare |
| b1686 | ydiI | +0.5 | 1.1 | hypothetical protein (NCBI) | compare |
| b1712 | ihfA | +0.5 | 0.7 | integration host factor subunit alpha (NCBI) | compare |
| b4386 | lplA | +0.5 | 3.5 | lipoate-protein ligase A (NCBI) | compare |
| b0817 | mntR | +0.5 | 1.3 | DNA-binding transcriptional regulator of mntH (NCBI) | compare |
| b4381 | deoC | +0.5 | 1.8 | deoxyribose-phosphate aldolase (NCBI) | compare |
| b3203 | yhbH | +0.5 | 1.1 | predicted ribosome-associated, sigma 54 modulation protein (NCBI) | compare |
| b0798 | ybiA | +0.5 | 0.8 | hypothetical protein (NCBI) | compare |
| b2502 | ppx | +0.5 | 2.8 | exopolyphosphatase (NCBI) | compare |
| b0613 | citG | +0.5 | 1.7 | triphosphoribosyl-dephospho-CoA transferase (NCBI) | compare |
| b1348 | lar | +0.5 | 0.9 | Rac prophage; restriction alleviation protein (NCBI) | compare |
| b0059 | hepA | +0.5 | 4.0 | ATP-dependent helicase HepA (NCBI) | compare |
| b0630 | lipB | +0.5 | 0.9 | protein of lipoate biosynthesis (VIMSS) | compare |
| b2291 | yfbR | +0.5 | 1.5 | hypothetical protein (NCBI) | compare |
| b4598 | yncL | +0.5 | 1.2 | hypothetical protein (RefSeq) | compare |
| b2947 | gshB | +0.5 | 2.0 | glutathione synthetase (NCBI) | compare |
| b1946 | fliN | +0.5 | 1.6 | flagellar motor switch protein (NCBI) | compare |
| b1811 | yoaH | +0.5 | 1.8 | hypothetical protein (NCBI) | compare |
| b4695 | ykgT | +0.5 | 0.8 | no description | compare |
| b3258 | panF | +0.5 | 3.1 | sodium/pantothenate symporter (VIMSS) | compare |
| b2912 | ygfA | +0.5 | 1.6 | putative ligase (VIMSS) | compare |
| b2836 | aas | +0.5 | 3.5 | 2-acyl-glycerophospho-ethanolamine acyltransferase (NCBI) | compare |
| b1841 | yobA | +0.5 | 0.8 | hypothetical protein (NCBI) | compare |
| b1584 | speG | +0.5 | 2.8 | spermidine N1-acetyltransferase (NCBI) | compare |
| b2015 | yeeY | +0.5 | 2.5 | putative transcriptional regulator LYSR-type (VIMSS) | compare |
| b1424 | mdoD | +0.5 | 2.4 | glucan biosynthesis protein, periplasmic (RefSeq) | compare |
| b1246 | oppD | +0.5 | 2.5 | oligopeptide transporter ATP-binding component (NCBI) | compare |
| b3860 | dsbA | +0.5 | 2.8 | periplasmic protein disulfide isomerase I (NCBI) | compare |
| b2489 | hyfI | +0.5 | 2.1 | hydrogenase 4, Fe-S subunit (NCBI) | compare |
| b1306 | pspC | +0.5 | 1.5 | DNA-binding transcriptional activator (NCBI) | compare |
| b3790 | rffC | +0.5 | 2.4 | TDP-fucosamine acetyltransferase (RefSeq) | compare |
| b0143 | pcnB | +0.5 | 2.5 | poly(A) polymerase I (VIMSS) | compare |
| b1827 | kdgR | +0.4 | 0.8 | predicted DNA-binding transcriptional regulator (NCBI) | compare |
| b4648 | ysaC | +0.4 | 1.6 | no description | compare |
| b1622 | malY | +0.4 | 2.0 | bifunctional beta-cystathionase, PLP-dependent/ regulator of maltose regulon (NCBI) | compare |
| b4594 | ymgJ | +0.4 | 1.0 | hypothetical protein (RefSeq) | compare |
| b2277 | nuoM | +0.4 | 2.5 | NADH dehydrogenase subunit M (NCBI) | compare |
| b1349 | recT | +0.4 | 2.0 | Rac prophage; recombination and repair protein (NCBI) | compare |
| b2690 | yqaB | +0.4 | 1.6 | predicted hydrolase (NCBI) | compare |
| b2047 | wcaJ | +0.4 | 1.5 | predicted UDP-glucose lipid carrier transferase (NCBI) | compare |
| b0655 | gltI | +0.4 | 1.5 | glutamate and aspartate transporter subunit (NCBI) | compare |
| b2443 | yffL | +0.4 | 1.6 | CPZ-55 prophage; predicted protein (NCBI) | compare |
| b0852 | rimK | +0.4 | 2.1 | ribosomal protein S6 modification protein (NCBI) | compare |
| b0487 | cueR | +0.4 | 1.5 | DNA-binding transcriptional activator of copper-responsive regulon genes (NCBI) | compare |
| b2343 | b2343 | +0.4 | 1.0 | orf, hypothetical protein (VIMSS) | compare |
| b0428 | cyoE | +0.4 | 2.1 | protoheme IX farnesyltransferase (NCBI) | compare |
| b1049 | mdoH | +0.4 | 3.0 | glucosyltransferase MdoH (NCBI) | compare |
| b4581 | ybeM | +0.4 | 2.4 | no description | compare |
| b4513 | kdpF | +0.4 | 1.4 | potassium ion accessory transporter subunit (NCBI) | compare |
| b2782 | chpA | +0.4 | 1.4 | toxin of the ChpA-ChpR toxin-antitoxin system, endoribonuclease (NCBI) | compare |
| b4438 | cyaR | +0.4 | 0.7 | sRNA effector of ompX mRNA instability, cAMP-induced; hfq-dependent (RefSeq) | compare |
| b3221 | yhcH | +0.4 | 1.8 | hypothetical protein (NCBI) | compare |
| b1514 | lsrC | +0.4 | 1.0 | AI2 transporter (NCBI) | compare |
| b1462 | b1462 | +0.4 | 0.7 | orf, hypothetical protein (VIMSS) | compare |
| b0991 | ymcE | +0.4 | 1.6 | cold shock gene (NCBI) | compare |
| b2673 | nrdH | +0.4 | 1.2 | glutaredoxin-like protein (NCBI) | compare |
| b1418 | cybB | +0.4 | 1.4 | cytochrome b(561) (VIMSS) | compare |
| b2263 | yfbB | +0.4 | 1.0 | predicted peptidase (NCBI) | compare |
| b3786 | rffE | +0.4 | 3.4 | UDP-N-acetyl glucosamine-2-epimerase (NCBI) | compare |
| b4460 | araH | +0.4 | 1.2 | fused L-arabinose transporter subunits of ABC superfamily: membrane components (RefSeq) | compare |
| b1553 | ydfP | +0.4 | 1.2 | Qin prophage; conserved protein (NCBI) | compare |
| b1778 | yeaA | +0.4 | 1.1 | methionine sulfoxide reductase B (NCBI) | compare |
| b2298 | yfcC | +0.4 | 2.6 | putative S-transferase (VIMSS) | compare |
| b2221 | atoD | +0.4 | 1.3 | acetyl-CoA:acetoacetyl-CoA transferase, alpha subunit (NCBI) | compare |
| b1336 | ydaH | +0.4 | 1.7 | putative pump protein (transport) (VIMSS) | compare |
| b2113 | mrp | +0.4 | 2.0 | putative ATPase (VIMSS) | compare |
| b3033 | yqiB | +0.4 | 1.8 | predicted dehydrogenase (NCBI) | compare |
| b2156 | lysP | +0.4 | 2.8 | lysine transporter (NCBI) | compare |
| b0228 | yafM | +0.4 | 2.1 | hypothetical protein (NCBI) | compare |
| b2240 | glpT | +0.4 | 2.9 | sn-glycerol-3-phosphate transporter (NCBI) | compare |
| b2923 | argO | +0.4 | 2.1 | arginine exporter protein (NCBI) | compare |
| b3206 | npr | +0.4 | 1.5 | phosphohistidinoprotein-hexose phosphotransferase component of N-regulated PTS system (Npr) (NCBI) | compare |
| b1221 | narL | +0.4 | 1.9 | DNA-binding response regulator in two-component regulatory system with NarX (or NarQ) (NCBI) | compare |
| b3834 | yigP | +0.4 | 1.9 | hypothetical protein (NCBI) | compare |