Experiment set10IT054 for Agrobacterium fabrum C58

Compare to:

1,4-Butanediol carbon source

200 most detrimental genes:

  gene name fitness t score description  
Atu0824 +0.8 1.8 hypothetical protein compare
Atu2193 +0.8 1.4 hypothetical protein compare
Atu3730 +0.8 1.3 hypothetical protein compare
Atu1573 +0.8 1.8 hypothetical protein compare
Atu3009 +0.7 1.2 exopolysaccharide production protein compare
Atu1483 +0.7 2.7 cytochrome b561 compare
Atu0280 +0.7 1.5 hypothetical protein compare
Atu3001 +0.7 1.6 hypothetical protein compare
Atu8017 +0.7 2.4 hypothetical protein compare
Atu1232 +0.6 1.3 hypothetical protein compare
Atu1321 +0.6 3.4 hypothetical protein compare
Atu3008 +0.6 0.7 hypothetical protein compare
Atu3507 +0.6 2.0 hypothetical protein compare
Atu0142 +0.6 2.6 cytochrome o ubiquinol oxidase subunit II compare
Atu0135 +0.6 1.3 uracil phosphoribosyltransferase compare
Atu4540 +0.6 2.4 protocatechuate 3,4-dioxygenase subunit beta compare
Atu0809 +0.6 1.5 hypothetical protein compare
Atu3071 +0.6 3.5 hypothetical protein compare
Atu5121 +0.6 4.3 two component response regulator compare
Atu1570 +0.6 0.9 hypothetical protein compare
Atu1847 +0.6 1.3 hypothetical protein compare
Atu3031 +0.6 1.1 hypothetical protein compare
Atu1333 +0.6 2.2 outer membrane protein compare
Atu0225 +0.5 0.8 hypothetical protein compare
Atu4159 +0.5 1.6 AsnC family transcriptional regulator compare
Atu2166 +0.5 2.1 hypothetical protein compare
Atu1503 +0.5 0.9 hypothetical protein compare
Atu0953 +0.5 0.5 hypothetical protein compare
Atu1865 +0.5 2.3 hypothetical protein compare
Atu3006 +0.5 1.9 hypothetical protein compare
Atu0524 +0.5 3.0 transcriptional regulator, LuxR family compare
Atu8151 +0.5 1.5 hypothetical protein compare
Atu3122 +0.5 2.2 cold shock protein compare
Atu3012 +0.5 0.7 hypothetical protein compare
Atu4290 +0.5 2.1 hypothetical protein compare
Atu6104 +0.5 2.6 conserved hypothetical protein compare
Atu2657 +0.5 1.8 hypothetical protein compare
Atu8046 +0.5 1.5 hypothetical protein compare
Atu3653 +0.4 2.5 hypothetical protein compare
Atu4237 +0.4 2.1 hypothetical protein compare
Atu3121 +0.4 0.8 cold shock protein compare
Atu3387 +0.4 1.5 sigma factor compare
Atu0640 +0.4 1.6 hypothetical protein compare
Atu6045 +0.4 1.4 replication protein C compare
Atu0369 +0.4 1.9 hypothetical protein compare
Atu3610 +0.4 1.4 transporter compare
Atu3648 +0.4 2.5 hypothetical protein compare
Atu8162 +0.4 0.6 hypothetical protein compare
Atu5034 +0.4 1.3 hypothetical protein compare
Atu1387 +0.4 1.8 transcriptional regulator, GntR family compare
Atu1846 +0.4 1.1 hypothetical protein compare
Atu4680 +0.4 1.8 amino acid ABC transporter permease compare
Atu0328 +0.4 2.7 heat-inducible transcription repressor compare
Atu1250 +0.4 2.4 hypothetical protein compare
Atu1952 +0.4 1.0 hypothetical protein compare
Atu1339 +0.4 1.1 ribonuclease E compare
Atu4767 +0.4 2.0 hypothetical protein compare
Atu2567 +0.4 1.4 thiamin biosynthesis protein ThiG compare
Atu3632 +0.4 1.5 hypothetical protein compare
Atu1398 +0.4 1.3 ABC transporter, membrane spanning protein (amino acid) compare
Atu1149 +0.4 0.9 adenylate cyclase compare
Atu2352 +0.4 1.0 hypothetical protein compare
Atu3848 +0.4 2.9 hypothetical protein compare
Atu2600 +0.4 2.6 ABC transporter, nucleotide binding/ATPase protein (maltose/maltodextrin) compare
Atu3160 +0.4 1.1 hypothetical protein compare
Atu3598 +0.4 0.9 thiol:disulfide interchange protein compare
Atu2462 +0.4 1.5 hypothetical protein compare
Atu1888 +0.4 3.1 two component sensor kinase compare
Atu2203 +0.4 2.1 hypothetical protein compare
Atu1361 +0.4 1.8 hypothetical protein compare
Atu6153 +0.4 1.9 conserved hypothetical protein compare
Atu2407 +0.4 1.6 urease gamma subunit compare
Atu1734 +0.4 1.2 hypothetical protein compare
Atu8185 +0.4 1.4 hypothetical protein compare
Atu5517 +0.4 1.1 hypothetical protein compare
Atu0593 +0.4 2.4 ABC transporter, membrane spanning protein compare
Atu8170 +0.4 2.0 hypothetical protein compare
Atu2120 +0.4 1.4 O-methyltransferase compare
Atu2146 +0.4 0.9 hypothetical protein compare
Atu3764 +0.4 2.2 sigma 54 dependent transcriptional activator compare
Atu0419 +0.3 0.9 two component sensor kinase compare
Atu4236 +0.3 2.3 dehydrogenase compare
Atu1871 +0.3 1.9 glutathione S-transferase compare
Atu1694 +0.3 1.3 hypothetical protein compare
Atu4407 +0.3 1.6 periplasmic nitrate reductase, NapD protein compare
Atu5496 +0.3 2.6 TetR family transcriptional regulator compare
Atu0595 +0.3 2.3 ABC transporter, nucleotide binding/ATPase protein compare
Atu3068 +0.3 2.3 ribokinase compare
Atu3494 +0.3 2.1 hypothetical protein compare
Atu1492 +0.3 1.2 transcriptional regulator, ArsR family compare
Atu8047 +0.3 2.1 hypothetical protein compare
Atu1742 +0.3 1.9 hypothetical protein compare
Atu3569 +0.3 1.1 hypothetical protein compare
Atu8195 +0.3 1.5 hypothetical protein compare
Atu3036 +0.3 1.2 dipeptide ABC transporter permease compare
Atu6189 +0.3 0.9 protein secretion chaperone compare
Atu6165 +0.3 0.7 hypothetical protein compare
Atu0755 +0.3 1.3 hypothetical protein compare
Atu1864 +0.3 1.8 putative homoserine/homoserine lactone efflux protein compare
Atu4369 +0.3 1.9 sugar ABC transporter substrate-binding protein compare
Atu0386 +0.3 0.9 hypothetical protein compare
Atu1994 +0.3 1.0 acyl-CoA hydrolase compare
Atu3554 +0.3 1.1 hypothetical protein compare
Atu2158 +0.3 1.7 hypothetical protein compare
Atu1184 +0.3 1.1 hypothetical protein compare
Atu6156 +0.3 1.7 virA/G regulated gene compare
Atu2649 +0.3 1.3 hypothetical protein compare
Atu5549 +0.3 2.3 hypothetical protein compare
Atu2033 +0.3 1.9 hypothetical protein compare
Atu1998 +0.3 1.9 hypothetical protein compare
Atu3827 +0.3 2.1 LysR family transcriptional regulator compare
Atu0772 +0.3 2.3 hypothetical protein compare
Atu1021 +0.3 1.1 outer membrane protein compare
Atu0375 +0.3 1.1 small heat shock protein compare
Atu0786 +0.3 1.8 peptidase, family M16 compare
Atu1968 +0.3 0.8 hypothetical protein compare
Atu4668 +0.3 2.2 ABC transporter permease compare
Atu3523 +0.3 1.6 polysaccharide biosynthesis-like protein compare
Atu1581 +0.3 1.0 hypothetical protein compare
Atu4799 +0.3 1.6 dTDP-4-dehydrorhamnose 3,5-epimerase compare
Atu5429 +0.3 1.4 transcriptional regulator compare
Atu0925 +0.3 0.9 hypothetical protein compare
Atu5169 +0.3 1.3 type IV secretion protein AvhB8 compare
Atu8150 +0.3 1.6 hypothetical protein compare
Atu8200 +0.3 1.5 hypothetical protein compare
Atu4139 +0.3 0.8 hypothetical protein compare
Atu0435 +0.3 0.9 tRNA-Gly compare
Atu1920 +0.3 1.8 hypothetical protein compare
Atu0485 +0.3 1.7 hypothetical protein compare
Atu0561 +0.3 1.7 flagellar motor switch protein compare
Atu0156 +0.3 1.4 hypothetical protein compare
Atu2441 +0.3 1.0 RNA methylase compare
Atu1489 +0.3 2.1 arsenical resistance protein compare
Atu2152 +0.3 1.5 hypothetical protein compare
Atu2273 +0.3 1.5 hypothetical protein compare
Atu5494 +0.3 1.4 hypothetical protein compare
Atu1314 +0.3 1.3 transcriptional regulator, TetR family compare
Atu0474 +0.3 1.8 putative RNA polymerase sigma-70 factor compare
Atu3468 +0.3 0.3 hypothetical protein compare
Atu1741 +0.3 1.2 hypothetical protein compare
Atu4499 +0.3 1.6 hypothetical protein compare
Atu3100 +0.3 1.4 sugar ABC transporter permease compare
Atu0746 +0.3 1.3 hypothetical protein compare
Atu4525 +0.3 2.2 oligopeptide ABC transporter substrate-binding protein compare
Atu3045 +0.3 1.3 hypothetical protein compare
Atu4630 +0.3 1.2 hypothetical protein compare
Atu1853 +0.3 1.1 hypothetical protein compare
Atu1619 +0.3 1.2 protein-export membrane protein SECG compare
Atu5045 +0.3 1.0 hypothetical protein compare
Atu5163 +0.3 0.8 type IV secretion protein AvhB2 compare
Atu3270 +0.3 1.3 hypothetical protein compare
Atu1351 +0.3 1.7 hypothetical protein compare
Atu1970 +0.3 1.1 hypothetical protein compare
Atu1440 +0.3 1.8 hypothetical protein compare
Atu0749 +0.3 0.9 biotin synthesis BioY protein compare
Atu4452 +0.3 0.9 hypothetical protein compare
Atu2220 +0.3 2.0 hypothetical protein compare
Atu3078 +0.3 1.5 LysR family transcriptional regulator compare
Atu4595 +0.3 1.2 dehydrogenase compare
Atu3496 +0.3 1.0 hypothetical protein compare
Atu1072 +0.3 1.4 hypothetical protein compare
Atu1666 +0.3 1.1 hypothetical protein compare
Atu0495 +0.3 1.4 hypothetical protein compare
Atu4705 +0.3 1.2 LysR family transcriptional regulator compare
Atu3473 +0.3 1.9 2-oxoisovalerate dehydrogenase subunit alpha compare
Atu8053 +0.3 0.9 hypothetical protein compare
Atu3926 +0.3 1.0 translation initiation inhibitor compare
Atu2708 +0.3 1.7 MFS permease compare
Atu2104 +0.3 0.8 hypothetical protein compare
Atu4120 +0.3 1.7 mandelate racemase compare
Atu0162 +0.3 1.0 biopolymer transport protein compare
Atu3098 +0.3 1.8 sn-glycerol-3-phosphate ABC transporter membrane protein compare
Atu5475 +0.3 1.1 hypothetical protein compare
Atu2646 +0.3 0.9 hypothetical protein compare
Atu3172 +0.3 1.6 sugar ABC transporter permease compare
Atu4306 +0.3 1.1 two component response regulator compare
Atu3773 +0.3 0.9 hypothetical protein compare
Atu3419 +0.3 1.5 hippurate hydrolase compare
Atu4662 +0.3 1.2 oligopeptide ABC transporter permease compare
Atu3807 +0.2 1.4 AsnC family transcriptional regulator compare
Atu3067 +0.2 1.3 hypothetical protein compare
Atu8165 +0.2 0.6 hypothetical protein compare
Atu2307 +0.2 1.5 monooxygenase compare
Atu1859 +0.2 1.0 glutaminase A compare
Atu3548 +0.2 1.7 glycosyltransferase compare
Atu1302 +0.2 0.7 hypothetical protein compare
Atu1045 +0.2 1.9 hypothetical protein compare
Atu3705 +0.2 1.1 hypothetical protein compare
Atu1423 +0.2 1.3 hypothetical protein compare
Atu1438 +0.2 1.2 transcriptional regulator, AraC family compare
Atu2626 +0.2 1.6 hypothetical protein compare
Atu3263 +0.2 1.8 L-seryl-tRNA(Ser) selenium transferase compare
Atu3642 +0.2 1.7 vgrG protein compare
Atu4036 +0.2 2.0 DNA topoisomerase compare
Atu3512 +0.2 1.7 competence protein F compare
Atu0728 +0.2 1.3 hypothetical protein compare
Atu1967 +0.2 1.1 hypothetical protein compare
Atu2135 +0.2 1.3 transcriptional regulator, TetR family compare
Atu5095 +0.2 1.5 hypothetical protein compare
Atu0551 +0.2 1.0 flagellar protein FLGA precursor compare


Specific Phenotypes

For 4 genes in this experiment

For carbon source 1,4-Butanediol in Agrobacterium fabrum C58

For carbon source 1,4-Butanediol across organisms